Search of human proteins with 14196474

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14196474 protocadherin gamma subfamily A, 6 isoform 2
precursor [Homo sapiens]
         (818 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs...  1600   0.0  
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs...  1580   0.0  
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs...  1164   0.0  
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs...  1163   0.0  
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs...  1162   0.0  
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs...  1160   0.0  
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs...  1159   0.0  
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs...  1158   0.0  
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs...  1139   0.0  
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso...  1138   0.0  
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs...  1136   0.0  
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs...  1135   0.0  
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs...  1134   0.0  
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs...  1134   0.0  
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur...  1127   0.0  
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur...  1127   0.0  
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs...  1125   0.0  
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs...  1125   0.0  
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur...  1121   0.0  
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs...  1118   0.0  
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur...  1108   0.0  
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur...  1105   0.0  
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs...  1085   0.0  
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs...  1085   0.0  
gi|14196455 protocadherin gamma subfamily A, 11 isoform 3 precur...   828   0.0  
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs...   699   0.0  
gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precurs...   699   0.0  
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs...   690   0.0  
gi|14270502 protocadherin gamma subfamily B, 6 isoform 2 precurs...   690   0.0  
gi|14270508 protocadherin gamma subfamily B, 7 isoform 2 precurs...   686   0.0  

>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score = 1600 bits (4143), Expect = 0.0
 Identities = 818/818 (100%), Positives = 818/818 (100%)

Query: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
           MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA
Sbjct: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60

Query: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
           EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE
Sbjct: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120

Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
           VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180

Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
           DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240

Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
           MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300

Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
           ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360

Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
           PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420

Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
           TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480

Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
           VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
           TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720

Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVSFFPPKREE 818
           NQESYEKSEPLLITQDLLETKGEPRQLQVSFFPPKREE
Sbjct: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVSFFPPKREE 818


>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1580 bits (4090), Expect = 0.0
 Identities = 810/817 (99%), Positives = 812/817 (99%), Gaps = 2/817 (0%)

Query: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
           MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA
Sbjct: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60

Query: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
           EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE
Sbjct: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120

Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
           VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180

Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
           DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240

Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
           MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300

Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
           ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360

Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
           PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420

Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
           TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480

Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
           VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
           TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720

Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVSFFPPKRE 817
           NQESYEKSEPLLITQDLLETKGEPRQLQ +  PP  +
Sbjct: 781 NQESYEKSEPLLITQDLLETKGEPRQLQQA--PPNTD 815


>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
           [Homo sapiens]
          Length = 829

 Score = 1164 bits (3010), Expect = 0.0
 Identities = 596/798 (74%), Positives = 671/798 (84%)

Query: 15  LLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQL 74
           LL  LLGTL    + QIRYS+ EEL+KGSFVGNI  DLGLEP+ELAE GVRIVSRGR QL
Sbjct: 15  LLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQL 74

Query: 75  FSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFL 134
           FSLNP++GSLVTA RIDREELCAQ P CLV  NILVEDKL ++ VE+EI DINDN P F 
Sbjct: 75  FSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFP 134

Query: 135 KEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPEL 194
            EELE+KI E   P +RFP+   +DPDVG+NSLQ +KLS N +FS+ V S + G KYPEL
Sbjct: 135 TEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPEL 194

Query: 195 VLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPEN 254
           VLE  LDRE + +++LVL A DGGDPV S    I V VLD NDN PMFTQP YRVSV EN
Sbjct: 195 VLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWEN 254

Query: 255 LPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSF 314
           +PVGT +L V ATD DEG + +V+Y   K+  KI++IF LN ++GE+S   +LDYED+ F
Sbjct: 255 VPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMF 314

Query: 315 YELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDR 374
           YE+ +EA+DGPGL  RAK+L+T+LDVNDN PE+ +TS + ++ E    G  IAL  V DR
Sbjct: 315 YEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDR 374

Query: 375 DSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLST 434
           DSG NG V   +  +LPF+LEKS+  YYRLVT  +LDRE++  YNI++ A+D G+PPLST
Sbjct: 375 DSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLST 434

Query: 435 ETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAED 494
           ET I+L+V D NDNPPTFPH SYS Y+ ENNPRGASIFSV A DPD + NA+++Y+L ED
Sbjct: 435 ETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTED 494

Query: 495 TLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLD 554
           TLQGAPLSS+VSINS+TG+LYALRSFDYEQ RDL+L VTASDSG+PPLSSNVSL+LFVLD
Sbjct: 495 TLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLD 554

Query: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
           QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614

Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
           GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674

Query: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLAS 734
           LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRL+RWHKSRLLQASGGGLAS
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLAS 734

Query: 735 MPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLIT 794
            PGSHFVG +GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EKSEPLLIT
Sbjct: 735 TPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLLIT 794

Query: 795 QDLLETKGEPRQLQVSFF 812
           QDLLE KG+   LQVS F
Sbjct: 795 QDLLEMKGDSNLLQVSLF 812


>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1163 bits (3009), Expect = 0.0
 Identities = 595/810 (73%), Positives = 675/810 (83%), Gaps = 1/810 (0%)

Query: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
           MA P   P  +  + +  LLG L    A QI YS+ EE E+GS VGNI KDLGL P+ELA
Sbjct: 1   MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60

Query: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
           E GVRIVSRGR QLF+LNPR+G+LVTAGRIDREELC +SP C+ +  IL+ED + +  VE
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120

Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
           VEI+D+NDN P F  E+ E+K+ EN  P +RFPL E +DPDVG+NSLQG++L+ N +FS+
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180

Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
           DVQS A G KYPELVLE  LDRE EAV+ LVLTA DGGDPVRS  A+IL+ ++D NDN P
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240

Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
           +FTQP Y VSV EN+PVGT +L V ATD DEG +G+VTYSF K+ +KISQ+F LN L+G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300

Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
           I+    LDYEDS FY++ VEA DGPGLR R+KVL+T+LD NDN PEV VTS + ++ ES+
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360

Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
            PGTVIALF V D DSG NGLVTCSIP +LPF LEK+ GNYYRL+T+  LDREEV  YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420

Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
           TVTATD+GTPPLSTET ISL V D NDNPPTFPH+SYS Y+ ENNPRGASI S+ A DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480

Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
              NA+++YSLAEDT QGAPLSSYVSINS+TGILYAL SFDYEQ RDLQL +TASDSGDP
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDN PEILYP  PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSY LLK+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
           TVAVAD IPD+LADLGSL+PSA P+DS LTLYLVVAVAAVSCVFLAFV VLLAL+L+RWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720

Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLL A G  LA +P SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTLI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780

Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVS 810
           ++ES EKSEPLLITQDLLETKG+P  LQVS
Sbjct: 781 SRESCEKSEPLLITQDLLETKGDP-NLQVS 809


>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1162 bits (3006), Expect = 0.0
 Identities = 594/817 (72%), Positives = 675/817 (82%), Gaps = 3/817 (0%)

Query: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
           MA P   P  +  + +  LLG L    A QI YS+ EE E+GS VGNI KDLGL P+ELA
Sbjct: 1   MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60

Query: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
           E GVRIVSRGR QLF+LNPR+G+LVTAGRIDREELC +SP C+ +  IL+ED + +  VE
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120

Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
           VEI+D+NDN P F  E+ E+K+ EN  P +RFPL E +DPDVG+NSLQG++L+ N +FS+
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180

Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
           DVQS A G KYPELVLE  LDRE EAV+ LVLTA DGGDPVRS  A+IL+ ++D NDN P
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240

Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
           +FTQP Y VSV EN+PVGT +L V ATD DEG +G+VTYSF K+ +KISQ+F LN L+G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300

Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
           I+    LDYEDS FY++ VEA DGPGLR R+KVL+T+LD NDN PEV VTS + ++ ES+
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360

Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
            PGTVIALF V D DSG NGLVTCSIP +LPF LEK+ GNYYRL+T+  LDREEV  YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420

Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
           TVTATD+GTPPLSTET ISL V D NDNPPTFPH+SYS Y+ ENNPRGASI S+ A DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480

Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
              NA+++YSLAEDT QGAPLSSYVSINS+TGILYAL SFDYEQ RDLQL +TASDSGDP
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDN PEILYP  PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSY LLK+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
           TVAVAD IPD+LADLGSL+PSA P+DS LTLYLVVAVAAVSCVFLAFV VLLAL+L+RWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720

Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLL A G  LA +P SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTLI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780

Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVSFFPPKRE 817
           ++ES EKSEPLLITQDLLETKG+P   Q    PP  +
Sbjct: 781 SRESCEKSEPLLITQDLLETKGDPNLQQA---PPNTD 814


>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
           [Homo sapiens]
          Length = 817

 Score = 1160 bits (3002), Expect = 0.0
 Identities = 596/796 (74%), Positives = 676/796 (84%)

Query: 15  LLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQL 74
           LL  LLGT W A A +I YS+ EE +KGSFVG+I KDLGLEP+ELAE GVRI+SRGR QL
Sbjct: 15  LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74

Query: 75  FSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFL 134
           F+LN R+GSLVTAGRIDREE+CAQS RCLV+FNIL+EDK+NLYP++VEI+DINDN PRFL
Sbjct: 75  FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134

Query: 135 KEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPEL 194
            EE+ VKI+EN AP  RFPL E  DPDVG NSLQ ++LS N HFS+ VQS     KYPEL
Sbjct: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194

Query: 195 VLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPEN 254
           VLE  LDRE E V+ LVLTA DGGDP RSS A I VTV+DVND+TP+F+ P Y+V+VPEN
Sbjct: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254

Query: 255 LPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSF 314
           +PVGT +L V A D DEGV+GEVTYSF KIT K+ ++F LN LTGEIST   LDYE+++F
Sbjct: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314

Query: 315 YELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDR 374
           YE+ V+A+DGPG   +AKVLIT+LDVNDN PEV +TS S +I E  P GTVIALF + DR
Sbjct: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374

Query: 375 DSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLST 434
           DSG NG VTC+IP +LPF+LEKS+ NYYRLVT   LDRE + LYNIT+ ATD GTPPLS 
Sbjct: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434

Query: 435 ETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAED 494
           ET I + VADTNDNPPTFPHSSYSVY+ ENNPRGASIF V A D D + NAQ++YSLAED
Sbjct: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494

Query: 495 TLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLD 554
           T+QGAP+SSYVSINSDTG+LYAL+SFDYEQLR+LQL VTA DSGDPPLSSN+SLSLFVLD
Sbjct: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554

Query: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
           QNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LLKASEP
Sbjct: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614

Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
           GLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP++LAD
Sbjct: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674

Query: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLAS 734
           LGSLEPS  P + DLTLYLVVAVA VSCVFLAFV+VLLALRL+RWHKSRLLQAS GGLA+
Sbjct: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLAN 734

Query: 735 MPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLIT 794
           +P SHFVG++GV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LI+QES EK++ LL +
Sbjct: 735 VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLTS 794

Query: 795 QDLLETKGEPRQLQVS 810
            D  E K     +QVS
Sbjct: 795 VDFQECKENLPSIQVS 810


>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1159 bits (2997), Expect = 0.0
 Identities = 595/803 (74%), Positives = 672/803 (83%), Gaps = 2/803 (0%)

Query: 15  LLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQL 74
           LL  LLGTL    + QIRYS+ EEL+KGSFVGNI  DLGLEP+ELAE GVRIVSRGR QL
Sbjct: 15  LLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQL 74

Query: 75  FSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFL 134
           FSLNP++GSLVTA RIDREELCAQ P CLV  NILVEDKL ++ VE+EI DINDN P F 
Sbjct: 75  FSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFP 134

Query: 135 KEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPEL 194
            EELE+KI E   P +RFP+   +DPDVG+NSLQ +KLS N +FS+ V S + G KYPEL
Sbjct: 135 TEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPEL 194

Query: 195 VLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPEN 254
           VLE  LDRE + +++LVL A DGGDPV S    I V VLD NDN PMFTQP YRVSV EN
Sbjct: 195 VLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWEN 254

Query: 255 LPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSF 314
           +PVGT +L V ATD DEG + +V+Y   K+  KI++IF LN ++GE+S   +LDYED+ F
Sbjct: 255 VPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMF 314

Query: 315 YELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDR 374
           YE+ +EA+DGPGL  RAK+L+T+LDVNDN PE+ +TS + ++ E    G  IAL  V DR
Sbjct: 315 YEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDR 374

Query: 375 DSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLST 434
           DSG NG V   +  +LPF+LEKS+  YYRLVT  +LDRE++  YNI++ A+D G+PPLST
Sbjct: 375 DSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLST 434

Query: 435 ETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAED 494
           ET I+L+V D NDNPPTFPH SYS Y+ ENNPRGASIFSV A DPD + NA+++Y+L ED
Sbjct: 435 ETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTED 494

Query: 495 TLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLD 554
           TLQGAPLSS+VSINS+TG+LYALRSFDYEQ RDL+L VTASDSG+PPLSSNVSL+LFVLD
Sbjct: 495 TLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLD 554

Query: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
           QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614

Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
           GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674

Query: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLAS 734
           LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRL+RWHKSRLLQASGGGLAS
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLAS 734

Query: 735 MPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLIT 794
            PGSHFVG +GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EKSEPLLIT
Sbjct: 735 TPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLLIT 794

Query: 795 QDLLETKGEPRQLQVSFFPPKRE 817
           QDLLE KG+   LQ +  PP  +
Sbjct: 795 QDLLEMKGDSNLLQQA--PPNTD 815


>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1158 bits (2995), Expect = 0.0
 Identities = 596/803 (74%), Positives = 678/803 (84%), Gaps = 2/803 (0%)

Query: 15  LLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQL 74
           LL  LLGT W A A +I YS+ EE +KGSFVG+I KDLGLEP+ELAE GVRI+SRGR QL
Sbjct: 15  LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74

Query: 75  FSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFL 134
           F+LN R+GSLVTAGRIDREE+CAQS RCLV+FNIL+EDK+NLYP++VEI+DINDN PRFL
Sbjct: 75  FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134

Query: 135 KEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPEL 194
            EE+ VKI+EN AP  RFPL E  DPDVG NSLQ ++LS N HFS+ VQS     KYPEL
Sbjct: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194

Query: 195 VLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPEN 254
           VLE  LDRE E V+ LVLTA DGGDP RSS A I VTV+DVND+TP+F+ P Y+V+VPEN
Sbjct: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254

Query: 255 LPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSF 314
           +PVGT +L V A D DEGV+GEVTYSF KIT K+ ++F LN LTGEIST   LDYE+++F
Sbjct: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314

Query: 315 YELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDR 374
           YE+ V+A+DGPG   +AKVLIT+LDVNDN PEV +TS S +I E  P GTVIALF + DR
Sbjct: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374

Query: 375 DSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLST 434
           DSG NG VTC+IP +LPF+LEKS+ NYYRLVT   LDRE + LYNIT+ ATD GTPPLS 
Sbjct: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434

Query: 435 ETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAED 494
           ET I + VADTNDNPPTFPHSSYSVY+ ENNPRGASIF V A D D + NAQ++YSLAED
Sbjct: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494

Query: 495 TLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLD 554
           T+QGAP+SSYVSINSDTG+LYAL+SFDYEQLR+LQL VTA DSGDPPLSSN+SLSLFVLD
Sbjct: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554

Query: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
           QNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LLKASEP
Sbjct: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614

Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
           GLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP++LAD
Sbjct: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674

Query: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLAS 734
           LGSLEPS  P + DLTLYLVVAVA VSCVFLAFV+VLLALRL+RWHKSRLLQAS GGLA+
Sbjct: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLAN 734

Query: 735 MPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLIT 794
           +P SHFVG++GV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LI+QES EK++ LL +
Sbjct: 735 VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLTS 794

Query: 795 QDLLETKGEPRQLQVSFFPPKRE 817
            D  E K     +Q +  PP  +
Sbjct: 795 VDFQECKENLPSIQQA--PPNTD 815


>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 813

 Score = 1139 bits (2945), Expect = 0.0
 Identities = 593/811 (73%), Positives = 667/811 (82%), Gaps = 1/811 (0%)

Query: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
           MA P R     E +L   LLGTL    + QIRYS+PEEL+KGSFVGNI KDLGLEPQELA
Sbjct: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60

Query: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
           E GVRIVSRGR QLF+LNPR+GSLVTAGRIDREELCAQSP C+V+FNILVE+K+ +Y VE
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120

Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
           VEI+DINDN PRF  EEL+VK+ ENAA  +R  L    D DVG+NSL+ ++LS N HFS+
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180

Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
           DV S   G KYPELVLE  LDRE E V+ L+LTA+DGGDPV S    I VTVLD NDN P
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240

Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
           +FT   Y VSVPEN+PVGT +L +TATD DEG++G++TYSF    EKIS+ F L+   GE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300

Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
           IST  +LDYE+S FY + V A+DG  L   AKV++T+ DVNDN PEV++TS + +I+E  
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360

Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
            PGTVIALF V D DSG NG + CSIPR+LPF+LEKSV NYY L+T   LDREE   YNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420

Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
           T+T  D GTPPLSTE+ I L VAD NDNPP FP +SYS  V ENNPRG SIFSV A DPD
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480

Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
              NA+V+YSLAEDT QGAPLSSYVSINSDTG+LYALRSFDYEQLRDLQLWVTASDSG+P
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660

Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
           TVAVADRIPDILADLGS++    P D DLTLYLVVAVAAVSCVFLAFVIVLL LRL+RWH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720

Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQA G  LA +P SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780

Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVSF 811
           ++ES EKSEPLL++ D ++   E R++QVSF
Sbjct: 781 SEESCEKSEPLLMS-DKVDANKEERRVQVSF 810


>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1138 bits (2944), Expect = 0.0
 Identities = 583/810 (71%), Positives = 666/810 (82%)

Query: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
           MA PQ  P+R E +LL  LLGTLW     QIRYS+PEE +KGSFVGNI KDLGL+P++LA
Sbjct: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60

Query: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
           +HGVRIVSRGR QLF+LNPR+GSL+TAGRIDREELCAQSPRCL++ N LVEDK  L+ VE
Sbjct: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120

Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
           +EI+DINDN P+F  E+LEVKI E A P +R+PL E  DPDVG+NSLQ ++LS N HFS+
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
           DVQ+  +G   PELVLE  LDRE EA + LVLTA DGG P RSS  +I VTVLD NDN P
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240

Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
           +F  P+YRV V EN+P GT +L VTA+D DEG++G+V Y F KI EK + +F LN  TGE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300

Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
           IS + +LDYE+ SFYE+ ++A D   L  R K+LI++ DVNDN PEV++TS    + E++
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360

Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
            PGTVIA   V D+DSG NG V C    +LPF+LEKS+GNYYRLVT   LDRE V +YNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420

Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
           TV A+D GTPPLSTET I+L+VAD NDNPPTFPH+SYS Y+LENN RGASIFS+ A DPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480

Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
             +NAQV+YS+ EDTLQGAPLSSY+SINSDTG+LYAL+SFDYEQ+RDLQL VTASDSGDP
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
           TVAVAD IP++L +LGSL+PS  PNDS LTLYLVVAVAA+SCVFLAFV VLL LRL+RWH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720

Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQ SGG L  +P SHFVGVE V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780

Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVS 810
           +QE  EK++ LL + D  E K E    QVS
Sbjct: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQVS 810


>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1136 bits (2938), Expect = 0.0
 Identities = 580/803 (72%), Positives = 663/803 (82%)

Query: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
           MA PQ  P+R E +LL  LLGTLW     QIRYS+PEE +KGSFVGNI KDLGL+P++LA
Sbjct: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60

Query: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
           +HGVRIVSRGR QLF+LNPR+GSL+TAGRIDREELCAQSPRCL++ N LVEDK  L+ VE
Sbjct: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120

Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
           +EI+DINDN P+F  E+LEVKI E A P +R+PL E  DPDVG+NSLQ ++LS N HFS+
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
           DVQ+  +G   PELVLE  LDRE EA + LVLTA DGG P RSS  +I VTVLD NDN P
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240

Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
           +F  P+YRV V EN+P GT +L VTA+D DEG++G+V Y F KI EK + +F LN  TGE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300

Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
           IS + +LDYE+ SFYE+ ++A D   L  R K+LI++ DVNDN PEV++TS    + E++
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360

Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
            PGTVIA   V D+DSG NG V C    +LPF+LEKS+GNYYRLVT   LDRE V +YNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420

Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
           TV A+D GTPPLSTET I+L+VAD NDNPPTFPH+SYS Y+LENN RGASIFS+ A DPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480

Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
             +NAQV+YS+ EDTLQGAPLSSY+SINSDTG+LYAL+SFDYEQ+RDLQL VTASDSGDP
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
           TVAVAD IP++L +LGSL+PS  PNDS LTLYLVVAVAA+SCVFLAFV VLL LRL+RWH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720

Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQ SGG L  +P SHFVGVE V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780

Query: 781 NQESYEKSEPLLITQDLLETKGE 803
           +QE  EK++ LL + D  E K E
Sbjct: 781 SQEGCEKNDSLLTSVDFHEYKNE 803


>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score = 1135 bits (2936), Expect = 0.0
 Identities = 583/811 (71%), Positives = 657/811 (81%)

Query: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
           MA  Q+ P   + VLL  LL TLW A A QIRYS+ EE+++GSFVGNI KDLGLEP  LA
Sbjct: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60

Query: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
           E GVRIVSRGR QLF+LNPR+GSLVTA RIDREELCAQS  CL++FNIL+EDKL +Y VE
Sbjct: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120

Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
           VEI DINDN PRF  EELE+KI E   P  R PL   +D DVG N+LQ + L+ N HFS+
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180

Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
           DV+  A G KYPELVLE +LDRE EAV+ LVL A DGGDPV S  ++I V VLD NDN P
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240

Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
           +FTQP YR+S+PEN  VGT +L VTATD DEG + +V Y   K   + S++F L   +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300

Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
           ++   +LDYED++F+E+ +EA+DGPGL  RAKV++T+LDVNDN PE  +TS + +++E +
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360

Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
            PGT+I LF V DRDSG N   TCS+P  LPF+LEKSV NYYRLVT  ALDRE+   YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420

Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
           T+TA D G P LST+  I L VAD NDN P F  +SYS Y+ ENNPRGAS+FSV A DPD
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480

Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
            + NA V+YS AEDT+QGAPLSSY+SINSDTG+LYALRSFDYEQLRDLQ+WV A DSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSY LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
           TVAVADRIPDILADLGSLEPSA PNDSDLTLYLVVAVAAVSCVFLAFVIVLLA RL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720

Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQASGG L  M  SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVSF 811
           +QES EK + L   Q LLE + E    QV +
Sbjct: 781 SQESCEKKDFLSAPQSLLEEEREETFSQVIY 811


>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1134 bits (2933), Expect = 0.0
 Identities = 581/803 (72%), Positives = 654/803 (81%)

Query: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
           MA  Q+ P   + VLL  LL TLW A A QIRYS+ EE+++GSFVGNI KDLGLEP  LA
Sbjct: 1   MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60

Query: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
           E GVRIVSRGR QLF+LNPR+GSLVTA RIDREELCAQS  CL++FNIL+EDKL +Y VE
Sbjct: 61  EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120

Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
           VEI DINDN PRF  EELE+KI E   P  R PL   +D DVG N+LQ + L+ N HFS+
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180

Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
           DV+  A G KYPELVLE +LDRE EAV+ LVL A DGGDPV S  ++I V VLD NDN P
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240

Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
           +FTQP YR+S+PEN  VGT +L VTATD DEG + +V Y   K   + S++F L   +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300

Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
           ++   +LDYED++F+E+ +EA+DGPGL  RAKV++T+LDVNDN PE  +TS + +++E +
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360

Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
            PGT+I LF V DRDSG N   TCS+P  LPF+LEKSV NYYRLVT  ALDRE+   YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420

Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
           T+TA D G P LST+  I L VAD NDN P F  +SYS Y+ ENNPRGAS+FSV A DPD
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480

Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
            + NA V+YS AEDT+QGAPLSSY+SINSDTG+LYALRSFDYEQLRDLQ+WV A DSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSY LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
           TVAVADRIPDILADLGSLEPSA PNDSDLTLYLVVAVAAVSCVFLAFVIVLLA RL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720

Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQASGG L  M  SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 NQESYEKSEPLLITQDLLETKGE 803
           +QES EK + L   Q LLE + E
Sbjct: 781 SQESCEKKDFLSAPQSLLEEERE 803


>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1134 bits (2932), Expect = 0.0
 Identities = 592/817 (72%), Positives = 668/817 (81%), Gaps = 3/817 (0%)

Query: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
           MA P R     E +L   LLGTL    + QIRYS+PEEL+KGSFVGNI KDLGLEPQELA
Sbjct: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60

Query: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
           E GVRIVSRGR QLF+LNPR+GSLVTAGRIDREELCAQSP C+V+FNILVE+K+ +Y VE
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120

Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
           VEI+DINDN PRF  EEL+VK+ ENAA  +R  L    D DVG+NSL+ ++LS N HFS+
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180

Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
           DV S   G KYPELVLE  LDRE E V+ L+LTA+DGGDPV S    I VTVLD NDN P
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240

Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
           +FT   Y VSVPEN+PVGT +L +TATD DEG++G++TYSF    EKIS+ F L+   GE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300

Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
           IST  +LDYE+S FY + V A+DG  L   AKV++T+ DVNDN PEV++TS + +I+E  
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360

Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
            PGTVIALF V D DSG NG + CSIPR+LPF+LEKSV NYY L+T   LDREE   YNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420

Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
           T+T  D GTPPLSTE+ I L VAD NDNPP FP +SYS  V ENNPRG SIFSV A DPD
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480

Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
              NA+V+YSLAEDT QGAPLSSYVSINSDTG+LYALRSFDYEQLRDLQLWVTASDSG+P
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660

Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
           TVAVADRIPDILADLGS++    P D DLTLYLVVAVAAVSCVFLAFVIVLL LRL+RWH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720

Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQA G  LA +P SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780

Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVSFFPPKRE 817
           ++ES EKSEPLL++ D ++   E R++Q +  PP  +
Sbjct: 781 SEESCEKSEPLLMS-DKVDANKEERRVQQA--PPNTD 814


>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
           [Homo sapiens]
          Length = 936

 Score = 1127 bits (2915), Expect = 0.0
 Identities = 581/783 (74%), Positives = 643/783 (82%)

Query: 14  VLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQ 73
           VLL    G  W A A QI YSIPEELEKGSFVGNI KDLGL P+ELAE GVRIVSRGR Q
Sbjct: 18  VLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQ 77

Query: 74  LFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRF 133
           LFSLNPR+GSL+TAGRIDREELCAQS RC+VSFNILVED++ L+ +E+E+ DINDN P+F
Sbjct: 78  LFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKF 137

Query: 134 LKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPE 193
             E L+VKI EN A   RFPL E  DPDVG+NSLQ ++LS N HFS+ VQS A+G KYPE
Sbjct: 138 QAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPE 197

Query: 194 LVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPE 253
           LVLE +LDRE EA++ LVLTA DGGDP+RS    + VTV D NDN P+FT P YRVSVPE
Sbjct: 198 LVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPE 257

Query: 254 NLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSS 313
           NLPVGT +L VTATD+DEG +GEVTYSF K+ +     F LN  TGEI  S NLDYE++ 
Sbjct: 258 NLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETG 317

Query: 314 FYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFD 373
           FYE+ ++A DG      AKVLIT+ DVNDN PE+ +TS    + E +P GTV+AL  V D
Sbjct: 318 FYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHD 377

Query: 374 RDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLS 433
            DS  NG VTCSI   LPF+LEKS+ +YYRLV + ALDRE+V  YNITVTATD G+PPLS
Sbjct: 378 LDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLS 437

Query: 434 TETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAE 493
           TE    L VAD NDNPPTF   SY  Y+ ENN RGASIFSV ALDPD  +NAQ+ YSLAE
Sbjct: 438 TEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAE 497

Query: 494 DTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVL 553
           DT+QG PLSSY+SINSDTG+LYALRSFDYEQ  +LQ+ VTASDSGDPPLSSNVSLSLFVL
Sbjct: 498 DTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVL 557

Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
           DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE
Sbjct: 558 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 617

Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILA 673
           PGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP +LA
Sbjct: 618 PGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 677

Query: 674 DLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLA 733
           DLGS E  A    SDLTLYLVVAVAAVSCVFLAFVIVLLA RL+RWHKSRLLQASGGGL 
Sbjct: 678 DLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLT 737

Query: 734 SMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLI 793
            + GSHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EK++PL +
Sbjct: 738 GVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPLSL 797

Query: 794 TQD 796
             D
Sbjct: 798 LDD 800


>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
           [Homo sapiens]
          Length = 850

 Score = 1127 bits (2915), Expect = 0.0
 Identities = 581/783 (74%), Positives = 643/783 (82%)

Query: 14  VLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQ 73
           VLL    G  W A A QI YSIPEELEKGSFVGNI KDLGL P+ELAE GVRIVSRGR Q
Sbjct: 18  VLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQ 77

Query: 74  LFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRF 133
           LFSLNPR+GSL+TAGRIDREELCAQS RC+VSFNILVED++ L+ +E+E+ DINDN P+F
Sbjct: 78  LFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKF 137

Query: 134 LKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPE 193
             E L+VKI EN A   RFPL E  DPDVG+NSLQ ++LS N HFS+ VQS A+G KYPE
Sbjct: 138 QAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPE 197

Query: 194 LVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPE 253
           LVLE +LDRE EA++ LVLTA DGGDP+RS    + VTV D NDN P+FT P YRVSVPE
Sbjct: 198 LVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPE 257

Query: 254 NLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSS 313
           NLPVGT +L VTATD+DEG +GEVTYSF K+ +     F LN  TGEI  S NLDYE++ 
Sbjct: 258 NLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETG 317

Query: 314 FYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFD 373
           FYE+ ++A DG      AKVLIT+ DVNDN PE+ +TS    + E +P GTV+AL  V D
Sbjct: 318 FYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHD 377

Query: 374 RDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLS 433
            DS  NG VTCSI   LPF+LEKS+ +YYRLV + ALDRE+V  YNITVTATD G+PPLS
Sbjct: 378 LDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLS 437

Query: 434 TETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAE 493
           TE    L VAD NDNPPTF   SY  Y+ ENN RGASIFSV ALDPD  +NAQ+ YSLAE
Sbjct: 438 TEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAE 497

Query: 494 DTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVL 553
           DT+QG PLSSY+SINSDTG+LYALRSFDYEQ  +LQ+ VTASDSGDPPLSSNVSLSLFVL
Sbjct: 498 DTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVL 557

Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
           DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE
Sbjct: 558 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 617

Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILA 673
           PGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP +LA
Sbjct: 618 PGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 677

Query: 674 DLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLA 733
           DLGS E  A    SDLTLYLVVAVAAVSCVFLAFVIVLLA RL+RWHKSRLLQASGGGL 
Sbjct: 678 DLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLT 737

Query: 734 SMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLI 793
            + GSHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EK++PL +
Sbjct: 738 GVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPLSL 797

Query: 794 TQD 796
             D
Sbjct: 798 LDD 800


>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1125 bits (2910), Expect = 0.0
 Identities = 584/807 (72%), Positives = 655/807 (81%), Gaps = 3/807 (0%)

Query: 11  SEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRG 70
           S  +LL   L  L  A A  I YS+PEE +KGSFVGNI KDLGL+PQELA+ GVRIVSRG
Sbjct: 11  SRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRG 70

Query: 71  RMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNT 130
           RM LF+LNPR+GSL+TA RIDREELCAQS  CLVSFNILVEDK+ L+PVEVEI+DINDNT
Sbjct: 71  RMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNT 130

Query: 131 PRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPK 190
           P+F  EELE K+ E   P +R  L    D DVGMNSLQ ++LS N HFS+DVQ  A GP+
Sbjct: 131 PQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQ 190

Query: 191 YPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVS 250
           +PE+VL+  LDRE EAV+ L+LTA DGG+PVRS   +I + V+D NDN P FTQ  Y ++
Sbjct: 191 HPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHIN 250

Query: 251 VPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYE 310
           VPEN+P+GT +L V ATD DEG +GEVTYSF  +  +++QIF L+  TGEIS    LD+E
Sbjct: 251 VPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFE 310

Query: 311 DSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQ 370
           +   Y + V+A+DG GL  + KVLI +LDVNDN PEV +TS +  + E+ PPGT+IAL  
Sbjct: 311 EYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALIS 370

Query: 371 VFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTP 430
           V D+DSG NG  TC IP +LPF+LEK V NYYRLVT   LDRE +  YNIT+TA D+GTP
Sbjct: 371 VHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTP 430

Query: 431 PLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYS 490
            LSTET ISL V D NDN P F   SYS Y+ ENNPRGASIFSV A D D ++NAQ++YS
Sbjct: 431 ALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYS 490

Query: 491 LAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSL 550
           L EDT+QGAPLS+Y+SINSDTG+LYALRSFDYEQ RD+QL V A DSGDPPLSSNVSLSL
Sbjct: 491 LIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSL 550

Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
           F+LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLK
Sbjct: 551 FLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610

Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
           ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI D
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISD 670

Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGG 730
           ILADLGSLEPSAKPNDSDLTLYLVVA AAVSCVFLAFVIVLLA RL+RWHKSRLLQASGG
Sbjct: 671 ILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730

Query: 731 GLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEP 790
           GLASMPGSHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EK   
Sbjct: 731 GLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGF 790

Query: 791 LLITQDLLETKGEPRQLQVSFFPPKRE 817
           L   Q LLE K EP   Q    PP  +
Sbjct: 791 LSAPQSLLEDKKEPFSQQA---PPNTD 814


>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score = 1125 bits (2910), Expect = 0.0
 Identities = 584/801 (72%), Positives = 655/801 (81%), Gaps = 1/801 (0%)

Query: 11  SEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRG 70
           S  +LL   L  L  A A  I YS+PEE +KGSFVGNI KDLGL+PQELA+ GVRIVSRG
Sbjct: 11  SRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRG 70

Query: 71  RMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNT 130
           RM LF+LNPR+GSL+TA RIDREELCAQS  CLVSFNILVEDK+ L+PVEVEI+DINDNT
Sbjct: 71  RMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNT 130

Query: 131 PRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPK 190
           P+F  EELE K+ E   P +R  L    D DVGMNSLQ ++LS N HFS+DVQ  A GP+
Sbjct: 131 PQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQ 190

Query: 191 YPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVS 250
           +PE+VL+  LDRE EAV+ L+LTA DGG+PVRS   +I + V+D NDN P FTQ  Y ++
Sbjct: 191 HPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHIN 250

Query: 251 VPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYE 310
           VPEN+P+GT +L V ATD DEG +GEVTYSF  +  +++QIF L+  TGEIS    LD+E
Sbjct: 251 VPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFE 310

Query: 311 DSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQ 370
           +   Y + V+A+DG GL  + KVLI +LDVNDN PEV +TS +  + E+ PPGT+IAL  
Sbjct: 311 EYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALIS 370

Query: 371 VFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTP 430
           V D+DSG NG  TC IP +LPF+LEK V NYYRLVT   LDRE +  YNIT+TA D+GTP
Sbjct: 371 VHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTP 430

Query: 431 PLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYS 490
            LSTET ISL V D NDN P F   SYS Y+ ENNPRGASIFSV A D D ++NAQ++YS
Sbjct: 431 ALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYS 490

Query: 491 LAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSL 550
           L EDT+QGAPLS+Y+SINSDTG+LYALRSFDYEQ RD+QL V A DSGDPPLSSNVSLSL
Sbjct: 491 LIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSL 550

Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
           F+LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLK
Sbjct: 551 FLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610

Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
           ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI D
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISD 670

Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGG 730
           ILADLGSLEPSAKPNDSDLTLYLVVA AAVSCVFLAFVIVLLA RL+RWHKSRLLQASGG
Sbjct: 671 ILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730

Query: 731 GLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEP 790
           GLASMPGSHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EK   
Sbjct: 731 GLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGF 790

Query: 791 LLITQDLLETKGEPRQLQVSF 811
           L   Q LLE K EP   QV+F
Sbjct: 791 LSAPQSLLEDKKEPFS-QVNF 810


>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1121 bits (2899), Expect = 0.0
 Identities = 576/812 (70%), Positives = 662/812 (81%)

Query: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
           M P + H      VLL  LLGTLW     QIRYS+PEELEKGS VG+I +DLGLEP+ELA
Sbjct: 1   MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA 60

Query: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
           E GVRI+ RGR QLF+LNPR+GSLVTAGRIDREELC  + +C ++ +IL+EDK+ +Y VE
Sbjct: 61  ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE 120

Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
           VE+ DINDN P F + ELE+KI ENAA   RFPL   +DPD+G NSLQ ++LS N+HFS+
Sbjct: 121 VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL 180

Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
            VQ+ A G KYPELVL+  LDRE +A + LVLTA DGGDPVR+  A+I V VLD NDN P
Sbjct: 181 IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP 240

Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
            F QP YR SVPENL +GT +L V ATD DEGV+ EV YSF  + +K +Q+F L+  +G 
Sbjct: 241 AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300

Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
           IST   LD+E+S FY++ V+A D  G   RAKVLIT+LDVNDN PEVV+TS + ++ E++
Sbjct: 301 ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS 360

Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
           P GT+IAL  V D+DS  NG V C I  +LPF+LEKS GNYY LVT+  LDRE+V  YNI
Sbjct: 361 PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI 420

Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
           TVTATD+GTPPLSTET ISLNVADTNDNPP FP +SYS Y+ ENNPRG S+ SV A DPD
Sbjct: 421 TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD 480

Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
            ++NAQ++YSLAE+T+QGA LSSYVSINSDTG+LYAL SFDYEQ RDLQ+ V A D+G P
Sbjct: 481 CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
           TVAVAD IP +LADLGSLE  A    SDLTLYLVVAVAAVSCVFLAFVI+LLALRL+RWH
Sbjct: 661 TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH 720

Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQASGGGL   P SHFVGV+GV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+
Sbjct: 721 KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV 780

Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVSFF 812
           +QES+EKSEPLL++ D + +K     ++VS +
Sbjct: 781 SQESFEKSEPLLLSGDSVFSKDSHGLIEVSLY 812


>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1118 bits (2891), Expect = 0.0
 Identities = 574/801 (71%), Positives = 657/801 (82%)

Query: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
           M P + H      VLL  LLGTLW     QIRYS+PEELEKGS VG+I +DLGLEP+ELA
Sbjct: 1   MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA 60

Query: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
           E GVRI+ RGR QLF+LNPR+GSLVTAGRIDREELC  + +C ++ +IL+EDK+ +Y VE
Sbjct: 61  ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE 120

Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
           VE+ DINDN P F + ELE+KI ENAA   RFPL   +DPD+G NSLQ ++LS N+HFS+
Sbjct: 121 VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL 180

Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
            VQ+ A G KYPELVL+  LDRE +A + LVLTA DGGDPVR+  A+I V VLD NDN P
Sbjct: 181 IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP 240

Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
            F QP YR SVPENL +GT +L V ATD DEGV+ EV YSF  + +K +Q+F L+  +G 
Sbjct: 241 AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300

Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
           IST   LD+E+S FY++ V+A D  G   RAKVLIT+LDVNDN PEVV+TS + ++ E++
Sbjct: 301 ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS 360

Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
           P GT+IAL  V D+DS  NG V C I  +LPF+LEKS GNYY LVT+  LDRE+V  YNI
Sbjct: 361 PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI 420

Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
           TVTATD+GTPPLSTET ISLNVADTNDNPP FP +SYS Y+ ENNPRG S+ SV A DPD
Sbjct: 421 TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD 480

Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
            ++NAQ++YSLAE+T+QGA LSSYVSINSDTG+LYAL SFDYEQ RDLQ+ V A D+G P
Sbjct: 481 CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
           TVAVAD IP +LADLGSLE  A    SDLTLYLVVAVAAVSCVFLAFVI+LLALRL+RWH
Sbjct: 661 TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH 720

Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQASGGGL   P SHFVGV+GV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+
Sbjct: 721 KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV 780

Query: 781 NQESYEKSEPLLITQDLLETK 801
           +QES+EKSEPLL++ D + +K
Sbjct: 781 SQESFEKSEPLLLSGDSVFSK 801


>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
           [Homo sapiens]
          Length = 837

 Score = 1108 bits (2865), Expect = 0.0
 Identities = 571/819 (69%), Positives = 662/819 (80%), Gaps = 5/819 (0%)

Query: 1   MAPPQRHPQRSEQVLLLTL-LGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQEL 59
           MA   +   RS  +LLL + LGTL G  A QIRYS+PEE EKGSFVGNI KDLGLEP+EL
Sbjct: 1   MANRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPREL 60

Query: 60  AEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPV 119
           A+ GVRIVSRG+ QLF++NPR+GSL+TAGRIDREELC     C ++  +LVED L +Y V
Sbjct: 61  AKRGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGV 120

Query: 120 EVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFS 179
           EVEI+DINDN P F ++E+E+K+ E+A P +RF L    DPDVG+NSLQ ++LS N++FS
Sbjct: 121 EVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFS 180

Query: 180 VDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNT 239
           + ++    G K PELVLEG+LDRE EA + L+LTA+DGGDP+R     I V VLDVND+ 
Sbjct: 181 LQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHI 240

Query: 240 PMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTG 299
           PMFTQ VYRVSVPEN+  GT VL V ATD DEG++GEV YSF  +  K S+IF L+  TG
Sbjct: 241 PMFTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTG 300

Query: 300 EISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAES 359
           E+    +LD+E   FYE+ ++ +DG GL     +LIT++DVNDN PE+ +TS   +I E+
Sbjct: 301 EVQVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILEN 360

Query: 360 APPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYN 419
           +PPGTVIAL  V D+DSG NG V+C IP  LPF+LEK+ GNYY+L+T+  LDRE V  YN
Sbjct: 361 SPPGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYN 420

Query: 420 ITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDP 479
           IT+TATD+G+PPLS ET + LNVAD NDNPP FPHSSYS Y+ ENNPRGASIFSV ALDP
Sbjct: 421 ITLTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDP 480

Query: 480 DVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGD 539
           D  QNA V+YSL +DT+QG PLSSYVSINS+TG+LYAL+SFDYEQ RDL+L V A DSGD
Sbjct: 481 DSKQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGD 540

Query: 540 PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSG 599
           PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSG
Sbjct: 541 PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 600

Query: 600 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT 659
           QNAWLSYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT
Sbjct: 601 QNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT 660

Query: 660 LTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRW 719
           LTVAVAD IP++LADLGSLE  A    SDL+LYLVVAVAAVSC+FL FVIVLLALRL RW
Sbjct: 661 LTVAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRW 720

Query: 720 HKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL 779
           HKSRLLQAS GGLA MP SHFVGV+GV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTL
Sbjct: 721 HKSRLLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTL 780

Query: 780 INQESYEKSEPLLITQD--LLETKGEPRQLQVSF--FPP 814
           I+QES EKSEPLLI +D  ++  K +P   QV F   PP
Sbjct: 781 ISQESCEKSEPLLIAEDSAIILGKCDPTSNQVRFISLPP 819


>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
           [Homo sapiens]
          Length = 935

 Score = 1105 bits (2857), Expect = 0.0
 Identities = 564/797 (70%), Positives = 652/797 (81%), Gaps = 1/797 (0%)

Query: 1   MAPPQRHPQRSEQVLLLTL-LGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQEL 59
           MA   +   RS  +LLL + LGTL G  A QIRYS+PEE EKGSFVGNI KDLGLEP+EL
Sbjct: 1   MANRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPREL 60

Query: 60  AEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPV 119
           A+ GVRIVSRG+ QLF++NPR+GSL+TAGRIDREELC     C ++  +LVED L +Y V
Sbjct: 61  AKRGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGV 120

Query: 120 EVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFS 179
           EVEI+DINDN P F ++E+E+K+ E+A P +RF L    DPDVG+NSLQ ++LS N++FS
Sbjct: 121 EVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFS 180

Query: 180 VDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNT 239
           + ++    G K PELVLEG+LDRE EA + L+LTA+DGGDP+R     I V VLDVND+ 
Sbjct: 181 LQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHI 240

Query: 240 PMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTG 299
           PMFTQ VYRVSVPEN+  GT VL V ATD DEG++GEV YSF  +  K S+IF L+  TG
Sbjct: 241 PMFTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTG 300

Query: 300 EISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAES 359
           E+    +LD+E   FYE+ ++ +DG GL     +LIT++DVNDN PE+ +TS   +I E+
Sbjct: 301 EVQVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILEN 360

Query: 360 APPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYN 419
           +PPGTVIAL  V D+DSG NG V+C IP  LPF+LEK+ GNYY+L+T+  LDRE V  YN
Sbjct: 361 SPPGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYN 420

Query: 420 ITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDP 479
           IT+TATD+G+PPLS ET + LNVAD NDNPP FPHSSYS Y+ ENNPRGASIFSV ALDP
Sbjct: 421 ITLTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDP 480

Query: 480 DVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGD 539
           D  QNA V+YSL +DT+QG PLSSYVSINS+TG+LYAL+SFDYEQ RDL+L V A DSGD
Sbjct: 481 DSKQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGD 540

Query: 540 PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSG 599
           PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSG
Sbjct: 541 PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 600

Query: 600 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT 659
           QNAWLSYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT
Sbjct: 601 QNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT 660

Query: 660 LTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRW 719
           LTVAVAD IP++LADLGSLE  A    SDL+LYLVVAVAAVSC+FL FVIVLLALRL RW
Sbjct: 661 LTVAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRW 720

Query: 720 HKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL 779
           HKSRLLQAS GGLA MP SHFVGV+GV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTL
Sbjct: 721 HKSRLLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTL 780

Query: 780 INQESYEKSEPLLITQD 796
           I+QES EKSEPLLI +D
Sbjct: 781 ISQESCEKSEPLLIAED 797


>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1085 bits (2807), Expect = 0.0
 Identities = 563/796 (70%), Positives = 640/796 (80%)

Query: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
           MA P +   R   VLL +LLG LW A A+QIRYS+PEE EKG  VGNI KDL LEP+ELA
Sbjct: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60

Query: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
           E  VRIVSRGR QLFSLNPR+G+LVTAGRIDREELCAQSPRCLV+F +LVED++ LY +E
Sbjct: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120

Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
           +E+ DIND+ P+F  E LEVKI E A P +R+PL E  DPDVG+NSLQ ++LS N HFS+
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
           +VQ+  +G   PELVLE  LDRE    + LVLTA DGG+P RSS  +I VTVLD NDN P
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240

Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
           +F Q +YRV V EN+P GT +L  TA+D DEG++G+V Y F KI EK S +F LN  TGE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300

Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
           IST+ +LDYE+ SFYE+ ++A DG GL+   KVLI++ DVNDN PEV +TS    + E A
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360

Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
           P GTVI LF   DRDSG NG V CSI  +L F LE S  +YYRL+T   LDRE+   YNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420

Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
           TVTATD+GTPPLSTE  I+L V D NDNPP F  +SYSVY+ ENN RG SIFSV A DPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480

Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
            ++N++V YSLAEDT+QG+PLS+YVSINSDTG+LYAL SFDYEQ RDLQ+ VTASDSG P
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSL LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRL KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
           TVA+AD IPDILADLGSL+  A    SDLTLYLVVAVA VSCVFL FVI LLALRL+ WH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720

Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
            S LL+A+  GLA +P SHFVGV+GVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 NQESYEKSEPLLITQD 796
           +Q+S EK+EPL ++ D
Sbjct: 781 SQQSCEKNEPLCVSVD 796


>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
           [Homo sapiens]
          Length = 828

 Score = 1085 bits (2807), Expect = 0.0
 Identities = 563/796 (70%), Positives = 640/796 (80%)

Query: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
           MA P +   R   VLL +LLG LW A A+QIRYS+PEE EKG  VGNI KDL LEP+ELA
Sbjct: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60

Query: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
           E  VRIVSRGR QLFSLNPR+G+LVTAGRIDREELCAQSPRCLV+F +LVED++ LY +E
Sbjct: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120

Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
           +E+ DIND+ P+F  E LEVKI E A P +R+PL E  DPDVG+NSLQ ++LS N HFS+
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
           +VQ+  +G   PELVLE  LDRE    + LVLTA DGG+P RSS  +I VTVLD NDN P
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240

Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
           +F Q +YRV V EN+P GT +L  TA+D DEG++G+V Y F KI EK S +F LN  TGE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300

Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
           IST+ +LDYE+ SFYE+ ++A DG GL+   KVLI++ DVNDN PEV +TS    + E A
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360

Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
           P GTVI LF   DRDSG NG V CSI  +L F LE S  +YYRL+T   LDRE+   YNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420

Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
           TVTATD+GTPPLSTE  I+L V D NDNPP F  +SYSVY+ ENN RG SIFSV A DPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480

Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
            ++N++V YSLAEDT+QG+PLS+YVSINSDTG+LYAL SFDYEQ RDLQ+ VTASDSG P
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSL LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRL KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
           TVA+AD IPDILADLGSL+  A    SDLTLYLVVAVA VSCVFL FVI LLALRL+ WH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720

Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
            S LL+A+  GLA +P SHFVGV+GVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 NQESYEKSEPLLITQD 796
           +Q+S EK+EPL ++ D
Sbjct: 781 SQQSCEKNEPLCVSVD 796


>gi|14196455 protocadherin gamma subfamily A, 11 isoform 3 precursor
           [Homo sapiens]
          Length = 750

 Score =  828 bits (2139), Expect = 0.0
 Identities = 418/626 (66%), Positives = 497/626 (79%), Gaps = 1/626 (0%)

Query: 1   MAPPQRHPQRSEQVLLLTL-LGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQEL 59
           MA   +   RS  +LLL + LGTL G  A QIRYS+PEE EKGSFVGNI KDLGLEP+EL
Sbjct: 1   MANRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPREL 60

Query: 60  AEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPV 119
           A+ GVRIVSRG+ QLF++NPR+GSL+TAGRIDREELC     C ++  +LVED L +Y V
Sbjct: 61  AKRGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGV 120

Query: 120 EVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFS 179
           EVEI+DINDN P F ++E+E+K+ E+A P +RF L    DPDVG+NSLQ ++LS N++FS
Sbjct: 121 EVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFS 180

Query: 180 VDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNT 239
           + ++    G K PELVLEG+LDRE EA + L+LTA+DGGDP+R     I V VLDVND+ 
Sbjct: 181 LQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHI 240

Query: 240 PMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTG 299
           PMFTQ VYRVSVPEN+  GT VL V ATD DEG++GEV YSF  +  K S+IF L+  TG
Sbjct: 241 PMFTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTG 300

Query: 300 EISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAES 359
           E+    +LD+E   FYE+ ++ +DG GL     +LIT++DVNDN PE+ +TS   +I E+
Sbjct: 301 EVQVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILEN 360

Query: 360 APPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYN 419
           +PPGTVIAL  V D+DSG NG V+C IP  LPF+LEK+ GNYY+L+T+  LDRE V  YN
Sbjct: 361 SPPGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYN 420

Query: 420 ITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDP 479
           IT+TATD+G+PPLS ET + LNVAD NDNPP FPHSSYS Y+ ENNPRGASIFSV ALDP
Sbjct: 421 ITLTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDP 480

Query: 480 DVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGD 539
           D  QNA V+YSL +DT+QG PLSSYVSINS+TG+LYAL+SFDYEQ RDL+L V A DSGD
Sbjct: 481 DSKQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGD 540

Query: 540 PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSG 599
           PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSG
Sbjct: 541 PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 600

Query: 600 QNAWLSYRLLKASEPGLFSVGLHTGE 625
           QNAWLSYRLLKASEPGLF+VG HTGE
Sbjct: 601 QNAWLSYRLLKASEPGLFAVGEHTGE 626



 Score =  152 bits (385), Expect = 9e-37
 Identities = 159/581 (27%), Positives = 243/581 (41%), Gaps = 61/581 (10%)

Query: 186 AHGPKYPELVLEGTLDREG--EAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFT 243
           A  P+   L+  G +DRE   E V    L  M+        +  + V ++D+NDN P F 
Sbjct: 77  AVNPRSGSLITAGRIDREELCETVSSCFLN-MELLVEDTLKIYGVEVEIIDINDNAPSFQ 135

Query: 244 QPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVL------ 297
           +    + V E+   G       A D D GV+   +Y         +  F L +       
Sbjct: 136 EDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSP-----NNYFSLQLRGRTDGA 190

Query: 298 -TGEISTSANLDYEDSSFYELGVEARDG--PGLRDRAKVLITILDVNDNVPEVVVTSGSR 354
              E+    +LD E  + + L + A DG  P  +    + + +LDVND++P    +    
Sbjct: 191 KNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRV 250

Query: 355 TIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPR-----SLPFELEKSVGNYYRLVTNAA 409
           ++ E+   GT + +    D D G+NG V  S        S  F+L+   G    +    +
Sbjct: 251 SVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGE---VQVRGS 307

Query: 410 LDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGA 469
           LD E+   Y + +   D G   L T T + + V D NDN P    +S    +LEN+P G 
Sbjct: 308 LDFEKYRFYEMEIQGQDGGG--LFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGT 365

Query: 470 SIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYAL---RSFDYEQLR 526
            I  +N  D D  +N QVS  +        P      +    G  Y L   R  D E ++
Sbjct: 366 VIALLNVQDQDSGENGQVSCFI--------PNHLPFKLEKTYGNYYKLITSRVLDRELVQ 417

Query: 527 DLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGY 586
              + +TA+D G PPLS+   + L V D NDN P  ++P      S+     P +   G 
Sbjct: 418 SYNITLTATDQGSPPLSAETHVWLNVADDNDNPP--VFPH-----SSYSAYIPENNPRGA 470

Query: 587 LVTKVVAVDRDSGQNAWLSYRLLKASEPGL-----FSVGLHTGEVRTARALLDRDALKQS 641
            +  V A+D DS QNA ++Y L   +  G+      S+  +TG +   ++          
Sbjct: 471 SIFSVTALDPDSKQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLE 530

Query: 642 LVVAVQDHGQPPLSATVTLTVAVADR---IPDILADLGSLEPSAKPNDSDLTLYLVVAVA 698
           L V  +D G PPLS+ V+L++ V D+    P+IL         A P D    + L    A
Sbjct: 531 LRVIARDSGDPPLSSNVSLSLFVLDQNDNAPEILY-------PALPTDGSTGVELAPRSA 583

Query: 699 AVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSH 739
               +    V V        W   RLL+AS  GL ++ G H
Sbjct: 584 EPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAV-GEH 623


>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  699 bits (1804), Expect = 0.0
 Identities = 365/725 (50%), Positives = 496/725 (68%), Gaps = 3/725 (0%)

Query: 13  QVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRM 72
           QVLL  LL    GA   QIRYSIPEEL K S VGN+ KDLGL  ++L    +R+ +    
Sbjct: 15  QVLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--K 72

Query: 73  QLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPR 132
           + F++NP +G L+ + RIDRE++C + P C++ F+ + E+ LN++ + V + DINDNTP 
Sbjct: 73  EYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPL 132

Query: 133 FLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYP 192
           F + ++ +KI E+  P + FPL    D DVG NSLQ + L+ N +F +  +    G KYP
Sbjct: 133 FKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYP 192

Query: 193 ELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVP 252
           EL+L+ +LDRE  ++++LVLTA+DGGDP +S   QI + V D NDN P+F+Q VYRV++ 
Sbjct: 193 ELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLR 252

Query: 253 ENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDS 312
           E++P G  VL VTATD+DEG++ E+TYSF  + E++   F LN  TGEI+T  +LD+E +
Sbjct: 253 EDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIA 312

Query: 313 SFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVF 372
           S Y L +EA+D   L     + + ILD ND  PEV+VTS S  + E +PPGTVIAL +  
Sbjct: 313 SSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTR 372

Query: 373 DRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPL 432
           DRDSG NG V C +  +  F L+ S  NYY+LVT+ ALDREE+  YN+T+TATD G PPL
Sbjct: 373 DRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPL 432

Query: 433 STETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLA 492
           S+  I++L+++D NDN P F  +SY V+V ENNP GASI  ++A DPD+  + QVSYS+ 
Sbjct: 433 SSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIV 492

Query: 493 EDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFV 552
              L+   + SYVS+++ +G+++A R+FD+EQLR  +L + A D G P LS+NVSL + V
Sbjct: 493 ASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
            D NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+AS
Sbjct: 553 GDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
           EPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  AD + ++L
Sbjct: 613 EPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVL 672

Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGL 732
            DL      + P  + L  YLVVA+A +S +F   VI+ ++LRL+   +S        GL
Sbjct: 673 PDLSDRREPSDP-QAKLQFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPGL 731

Query: 733 ASMPG 737
           +S PG
Sbjct: 732 SSKPG 736


>gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 811

 Score =  699 bits (1804), Expect = 0.0
 Identities = 365/725 (50%), Positives = 496/725 (68%), Gaps = 3/725 (0%)

Query: 13  QVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRM 72
           QVLL  LL    GA   QIRYSIPEEL K S VGN+ KDLGL  ++L    +R+ +    
Sbjct: 15  QVLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--K 72

Query: 73  QLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPR 132
           + F++NP +G L+ + RIDRE++C + P C++ F+ + E+ LN++ + V + DINDNTP 
Sbjct: 73  EYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPL 132

Query: 133 FLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYP 192
           F + ++ +KI E+  P + FPL    D DVG NSLQ + L+ N +F +  +    G KYP
Sbjct: 133 FKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYP 192

Query: 193 ELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVP 252
           EL+L+ +LDRE  ++++LVLTA+DGGDP +S   QI + V D NDN P+F+Q VYRV++ 
Sbjct: 193 ELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLR 252

Query: 253 ENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDS 312
           E++P G  VL VTATD+DEG++ E+TYSF  + E++   F LN  TGEI+T  +LD+E +
Sbjct: 253 EDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIA 312

Query: 313 SFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVF 372
           S Y L +EA+D   L     + + ILD ND  PEV+VTS S  + E +PPGTVIAL +  
Sbjct: 313 SSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTR 372

Query: 373 DRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPL 432
           DRDSG NG V C +  +  F L+ S  NYY+LVT+ ALDREE+  YN+T+TATD G PPL
Sbjct: 373 DRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPL 432

Query: 433 STETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLA 492
           S+  I++L+++D NDN P F  +SY V+V ENNP GASI  ++A DPD+  + QVSYS+ 
Sbjct: 433 SSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIV 492

Query: 493 EDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFV 552
              L+   + SYVS+++ +G+++A R+FD+EQLR  +L + A D G P LS+NVSL + V
Sbjct: 493 ASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
            D NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+AS
Sbjct: 553 GDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
           EPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  AD + ++L
Sbjct: 613 EPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVL 672

Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGL 732
            DL      + P  + L  YLVVA+A +S +F   VI+ ++LRL+   +S        GL
Sbjct: 673 PDLSDRREPSDP-QAKLQFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPGL 731

Query: 733 ASMPG 737
           +S PG
Sbjct: 732 SSKPG 736


>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 930

 Score =  690 bits (1781), Expect = 0.0
 Identities = 363/714 (50%), Positives = 490/714 (68%), Gaps = 3/714 (0%)

Query: 5   QRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGV 64
           QR      QVL   LL   +   +  IRYSIPEEL KGS VGN+ KDLGL   +++   +
Sbjct: 7   QRRRAGPRQVLFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKL 66

Query: 65  RIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIV 124
           R VS  ++  FS++  +G L+   RIDRE++C +  RC +    +VE+ LN++ V V I 
Sbjct: 67  R-VSAEKLH-FSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIE 124

Query: 125 DINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQS 184
           D+ND+ P+F K+E+ ++I E+A+  +R  L    DPD+ +NS++ +K++ N +FS+ V+ 
Sbjct: 125 DVNDHAPQFDKKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSLMVRV 184

Query: 185 EAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQ 244
            + G KYPEL LE  LDRE +  + L+LTA+DGGDP RS+ A I ++V D NDN P+F++
Sbjct: 185 NSDGGKYPELSLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSR 244

Query: 245 PVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTS 304
             YR+S+ ENLP G+PVL VTATDQDEGV+ E+ Y F    +    +F L+  TG I  +
Sbjct: 245 DEYRISLSENLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNN 304

Query: 305 ANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGT 364
            + D+ED   Y + VEA+DG GL  + KV+I ILD NDN PE+++TS S  I E++PPG 
Sbjct: 305 QSFDFEDVERYTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENSPPGM 364

Query: 365 VIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTA 424
           V+ALF+  D D G NG V C+I   +PF++  S  NYY+LVT+ ALDRE+   YN+T+ A
Sbjct: 365 VVALFKTRDLDFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVA 424

Query: 425 TDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQN 484
           TD+G PPLS+   I+L VAD NDN P F  +SY V+V ENNP GASI  V+A DPD+  N
Sbjct: 425 TDRGKPPLSSSRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPDLGLN 484

Query: 485 AQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSS 544
             +SYS+    L+   +SSYVS+++ +G+++A R+FD+EQLR   L + A D G P LS+
Sbjct: 485 GHISYSIVASDLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSA 544

Query: 545 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 604
           NVSL + V D+NDNAP +LYPAL  DGS   ++ PRSAEPGYLVTKVVAVD DSG NAWL
Sbjct: 545 NVSLRVLVGDRNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWL 604

Query: 605 SYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 664
           SY +L+ASEPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  
Sbjct: 605 SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVF 664

Query: 665 ADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQR 718
           AD + +IL DL S  P      ++L  YLVVA+A +S +FL  VI+ +ALRL+R
Sbjct: 665 ADNLQEILPDL-SDRPVLSDPQAELQFYLVVALALISVLFLLAVILAIALRLRR 717


>gi|14270502 protocadherin gamma subfamily B, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score =  690 bits (1781), Expect = 0.0
 Identities = 363/714 (50%), Positives = 490/714 (68%), Gaps = 3/714 (0%)

Query: 5   QRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGV 64
           QR      QVL   LL   +   +  IRYSIPEEL KGS VGN+ KDLGL   +++   +
Sbjct: 7   QRRRAGPRQVLFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKL 66

Query: 65  RIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIV 124
           R VS  ++  FS++  +G L+   RIDRE++C +  RC +    +VE+ LN++ V V I 
Sbjct: 67  R-VSAEKLH-FSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIE 124

Query: 125 DINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQS 184
           D+ND+ P+F K+E+ ++I E+A+  +R  L    DPD+ +NS++ +K++ N +FS+ V+ 
Sbjct: 125 DVNDHAPQFDKKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSLMVRV 184

Query: 185 EAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQ 244
            + G KYPEL LE  LDRE +  + L+LTA+DGGDP RS+ A I ++V D NDN P+F++
Sbjct: 185 NSDGGKYPELSLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSR 244

Query: 245 PVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTS 304
             YR+S+ ENLP G+PVL VTATDQDEGV+ E+ Y F    +    +F L+  TG I  +
Sbjct: 245 DEYRISLSENLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNN 304

Query: 305 ANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGT 364
            + D+ED   Y + VEA+DG GL  + KV+I ILD NDN PE+++TS S  I E++PPG 
Sbjct: 305 QSFDFEDVERYTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENSPPGM 364

Query: 365 VIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTA 424
           V+ALF+  D D G NG V C+I   +PF++  S  NYY+LVT+ ALDRE+   YN+T+ A
Sbjct: 365 VVALFKTRDLDFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVA 424

Query: 425 TDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQN 484
           TD+G PPLS+   I+L VAD NDN P F  +SY V+V ENNP GASI  V+A DPD+  N
Sbjct: 425 TDRGKPPLSSSRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPDLGLN 484

Query: 485 AQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSS 544
             +SYS+    L+   +SSYVS+++ +G+++A R+FD+EQLR   L + A D G P LS+
Sbjct: 485 GHISYSIVASDLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSA 544

Query: 545 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 604
           NVSL + V D+NDNAP +LYPAL  DGS   ++ PRSAEPGYLVTKVVAVD DSG NAWL
Sbjct: 545 NVSLRVLVGDRNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWL 604

Query: 605 SYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 664
           SY +L+ASEPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  
Sbjct: 605 SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVF 664

Query: 665 ADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQR 718
           AD + +IL DL S  P      ++L  YLVVA+A +S +FL  VI+ +ALRL+R
Sbjct: 665 ADNLQEILPDL-SDRPVLSDPQAELQFYLVVALALISVLFLLAVILAIALRLRR 717


>gi|14270508 protocadherin gamma subfamily B, 7 isoform 2 precursor
           [Homo sapiens]
          Length = 808

 Score =  686 bits (1769), Expect = 0.0
 Identities = 354/714 (49%), Positives = 489/714 (68%), Gaps = 3/714 (0%)

Query: 5   QRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGV 64
           QR      QVL   LL   +      IRYSIPEEL KGS VGN+ KDLGL   +++   +
Sbjct: 7   QRRRAGPRQVLFPLLLPLFYPTLCEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSAREL 66

Query: 65  RIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIV 124
           R VS  ++  FS++ ++G L+   RIDRE++C +  RC +    +VE+ LN++ V V I 
Sbjct: 67  R-VSAEKLH-FSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIE 124

Query: 125 DINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQS 184
           D+ND+ P+F K+E+ ++I E+ +      L    DPD+ MNSL  ++LS N +FS+  + 
Sbjct: 125 DVNDHAPQFRKDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSLVEKD 184

Query: 185 EAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQ 244
              G KYPELVL+ TLDRE ++ + LVLTA+DGGDP RS  AQI + V+D NDN P+F+Q
Sbjct: 185 NPDGGKYPELVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPPVFSQ 244

Query: 245 PVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTS 304
            VYRVS+ E++P GT +L V ATDQDEG++ E+TYSF  + +K   +F L+  TG I T 
Sbjct: 245 DVYRVSLREDVPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGNILTQ 304

Query: 305 ANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGT 364
             LD+E+   Y + +EA+D   L  R KV++ ++D NDN PE+++TS S  I E +PPG 
Sbjct: 305 QPLDFEEVERYTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGV 364

Query: 365 VIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTA 424
           V+ALF+  D+DSG NG V CS+ R +PF++  S  NYY+LVT+ ALDRE+   YN+T+ A
Sbjct: 365 VVALFKTRDQDSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNVTIAA 424

Query: 425 TDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQN 484
           TD+G PPLS+   I+L++ D NDN P F  S+Y V+V ENN  GASI  V+A DPD   N
Sbjct: 425 TDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGLN 484

Query: 485 AQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSS 544
            +VSYSL    L+   LSSYVS+++ +G+++A R+FD+EQLR  +L + A D G P LS+
Sbjct: 485 GRVSYSLIASDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSPALSA 544

Query: 545 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 604
           NVSL + V D+NDNAP +LYPAL  DGS   +  PR+A+PGYLVTKVVAVD DSG NAWL
Sbjct: 545 NVSLRVLVGDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWL 604

Query: 605 SYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 664
           SY +++ASEPGLFS+GL TGEVR  RAL D+D+++Q L+VAV+D GQPPLSAT TL +  
Sbjct: 605 SYHVVQASEPGLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATLHLVF 664

Query: 665 ADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQR 718
           AD + ++L D  S  P+   + +++  YLVVA+A +S +FL  VI+ +ALRL++
Sbjct: 665 ADSLQEVLPDF-SDHPTPSDSQAEMQFYLVVALALISVLFLLAVILAIALRLRQ 717


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.134    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,166,067
Number of Sequences: 37866
Number of extensions: 1395741
Number of successful extensions: 10357
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 3114
Number of HSP's gapped (non-prelim): 666
length of query: 818
length of database: 18,247,518
effective HSP length: 111
effective length of query: 707
effective length of database: 14,044,392
effective search space: 9929385144
effective search space used: 9929385144
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.

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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.