Search of human proteins with 94536856

Search of human proteins with 94536856

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|94536856 coiled-coil domain containing 106 [Homo sapiens]
         (280 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|94536856 coiled-coil domain containing 106 [Homo sapiens]          553   e-158
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            37   0.015
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]                       37   0.015
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]     35   0.056
gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]             35   0.056
gi|14249338 BUD13 homolog isoform 1 [Homo sapiens]                     35   0.056
gi|50233787 nuclear protein in testis [Homo sapiens]                   35   0.056
gi|21396500 HIRA interacting protein 3 [Homo sapiens]                  35   0.073
gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]             35   0.073
gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]             35   0.096
gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]             35   0.096
gi|78042577 MAP7 domain containing 1 [Homo sapiens]                    35   0.096
gi|239754487 PREDICTED: hypothetical protein [Homo sapiens]            33   0.21 
gi|169166609 PREDICTED: similar to ribonucleic acid binding prot...    33   0.21 
gi|239749042 PREDICTED: hypothetical protein [Homo sapiens]            33   0.21 
gi|113415994 PREDICTED: similar to ribonucleic acid binding prot...    33   0.21 
gi|239743067 PREDICTED: hypothetical protein [Homo sapiens]            33   0.21 
gi|239508713 PREDICTED: hypothetical protein [Homo sapiens]            33   0.21 
gi|22748877 basic helix-loop-helix domain containing, class B, 5...    33   0.21 
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             33   0.21 
gi|6857826 RNA-binding protein S1, serine-rich domain [Homo sapi...    33   0.21 
gi|18379334 RNA-binding protein S1, serine-rich domain [Homo sap...    33   0.21 
gi|58530840 desmoplakin isoform I [Homo sapiens]                       33   0.28 
gi|169167080 PREDICTED: hypothetical protein [Homo sapiens]            33   0.28 
gi|113415504 PREDICTED: similar to ribonucleic acid binding prot...    33   0.28 
gi|169166499 PREDICTED: similar to ribonucleic acid binding prot...    33   0.28 
gi|113415498 PREDICTED: similar to ribonucleic acid binding prot...    33   0.28 
gi|88973230 PREDICTED: similar to ribonucleic acid binding prote...    33   0.28 
gi|192807334 arsenate resistance protein 2 isoform d [Homo sapiens]    33   0.28 
gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens]     33   0.28 

>gi|94536856 coiled-coil domain containing 106 [Homo sapiens]
          Length = 280

 Score =  553 bits (1426), Expect = e-158
 Identities = 280/280 (100%), Positives = 280/280 (100%)

Query: 1   MNDRSSRRRTMKDDETFEISIPFDEAPHLDPQIFYSLSPSRRNFEEPPEAASSALALMNS 60
           MNDRSSRRRTMKDDETFEISIPFDEAPHLDPQIFYSLSPSRRNFEEPPEAASSALALMNS
Sbjct: 1   MNDRSSRRRTMKDDETFEISIPFDEAPHLDPQIFYSLSPSRRNFEEPPEAASSALALMNS 60

Query: 61  VKTQLHMALERNSWLQKRIEDLEEERDFLRCQLDKFISSARMEAEDHCRMKPGPRRMEGD 120
           VKTQLHMALERNSWLQKRIEDLEEERDFLRCQLDKFISSARMEAEDHCRMKPGPRRMEGD
Sbjct: 61  VKTQLHMALERNSWLQKRIEDLEEERDFLRCQLDKFISSARMEAEDHCRMKPGPRRMEGD 120

Query: 121 SRGGAGGEASDPESAASSLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQRVKDAD 180
           SRGGAGGEASDPESAASSLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQRVKDAD
Sbjct: 121 SRGGAGGEASDPESAASSLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQRVKDAD 180

Query: 181 GVLCRYKKILGTFQKLKSMSRAFEHHRVDRNTVALTTPIAELLIVAPEKLAEVGEFDPSK 240
           GVLCRYKKILGTFQKLKSMSRAFEHHRVDRNTVALTTPIAELLIVAPEKLAEVGEFDPSK
Sbjct: 181 GVLCRYKKILGTFQKLKSMSRAFEHHRVDRNTVALTTPIAELLIVAPEKLAEVGEFDPSK 240

Query: 241 ERLLEYSRRCFLALDDETLKKVQALKKSKLLLPITYRFKR 280
           ERLLEYSRRCFLALDDETLKKVQALKKSKLLLPITYRFKR
Sbjct: 241 ERLLEYSRRCFLALDDETLKKVQALKKSKLLLPITYRFKR 280


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 37.4 bits (85), Expect = 0.015
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 113 GPRRMEGDSRGGAGGEASDPESAASSLSGASEEGSASERRRQKQKGG--ASRRRFGKPKA 170
           G +   G SRGG G ++     A S  SG ++  S  +    K  GG  A RRR G  K+
Sbjct: 715 GKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGGGAKS 774

Query: 171 RERQRVKDADG 181
           R  ++   A G
Sbjct: 775 RSGEKAVTAGG 785


>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
          Length = 793

 Score = 37.4 bits (85), Expect = 0.015
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 3/110 (2%)

Query: 71  RNSWLQKRIEDLEEERDFLRCQLDKFISSARMEAEDHCRMKPGPRRMEGDSRGGAGGEAS 130
           +N  +       EEER+      D+     +ME ED  R +    R+E + R     E  
Sbjct: 229 KNGQISSEEPKQEEEREQ---GSDEISHHEKMEEEDKERAEAERARLEAEERERIKAEQD 285

Query: 131 DPESAASSLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQRVKDAD 180
              +   +   A E+ +A ER R++ +     R   K  A ERQR+K+ +
Sbjct: 286 KKIADERARIEAEEKAAAQERERREAEERERMREEEKRAAEERQRIKEEE 335


>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
          Length = 494

 Score = 35.4 bits (80), Expect = 0.056
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%)

Query: 98  SSARMEAEDHCRMKPGPRRMEGDSRGGAGGEASDPESAASSLSGASEEGSASERRRQKQK 157
           S +R +++   R +   RR+E + RG      S  +S   S S +  +G +  R R + K
Sbjct: 290 SPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSK 349

Query: 158 GGASRRRFGKPKARERQR 175
             +  +R G+ ++RE  R
Sbjct: 350 --SKDKRKGRKRSREESR 365


>gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]
          Length = 340

 Score = 35.4 bits (80), Expect = 0.056
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 5/67 (7%)

Query: 109 RMKPGPRRMEGDSRGGAGGEASDPESAASSLSGASEEGSASERRRQKQKGGASRRRFGKP 168
           R  PGPRR E +    +   A  P+       G  E+G +S    +K KG   +R     
Sbjct: 100 RAAPGPRRSEDEPPAASASAAPPPQRDEEEPDGVPEKGKSSGPSARKGKGQIEKR----- 154

Query: 169 KARERQR 175
           K RE++R
Sbjct: 155 KLREKRR 161


>gi|14249338 BUD13 homolog isoform 1 [Homo sapiens]
          Length = 619

 Score = 35.4 bits (80), Expect = 0.056
 Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 22/180 (12%)

Query: 2   NDRSSRRRTMKDDETFEISIPFDEAPHLDPQIFYSLSPSRRNFEEPPEAASSALALMNSV 61
           N   + RRT+   +T ++     ++P L P + YSL   R    + PE ASS  +     
Sbjct: 247 NSPDTSRRTLGSSDTQQLRRARHDSPDLAPNVTYSL--PRTKSGKAPERASSKTSPHWKE 304

Query: 62  KTQLHMALERNSWLQKRIEDLEEERDFLRCQLDKFISSAR-MEAEDHCRMKPGPRRMEGD 120
               H++  +NS                + + D  IS  R  +A+ H   K      +GD
Sbjct: 305 SGASHLSFPKNS----------------KYEYDPDISPPRKKQAKSHFGDKK-QLDSKGD 347

Query: 121 SRGGAGGEASDPESAASSLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQRVKDAD 180
            +     + S P    S     S+   +  R R + +  +S      P+ R+R +  D+D
Sbjct: 348 CQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHR--SSDSDLSPPRRRQRTKSSDSD 405


>gi|50233787 nuclear protein in testis [Homo sapiens]
          Length = 1132

 Score = 35.4 bits (80), Expect = 0.056
 Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 9/110 (8%)

Query: 48  PEAASSALALMNSVKTQLHMALERNSWLQKRIEDLEEERD------FLRCQLDKFISSAR 101
           PE     LAL+  ++ +  + L +   +QKR+  LEEE D      F   QLD   S + 
Sbjct: 442 PEKQRDPLALIEELEQEEGLTLAQ--LVQKRLMALEEEEDAEAPPSFSGAQLDSSPSGSV 499

Query: 102 MEAEDHCRMKPGPRRMEGDSRGGAGGEASDPESAASSLSGASEEGSASER 151
            + +   R++P P  ++G       G+ S     A  + G  E+   S R
Sbjct: 500 EDEDGDGRLRPSP-GLQGAGGAACLGKVSSSGKRAREVHGGQEQALDSPR 548


>gi|21396500 HIRA interacting protein 3 [Homo sapiens]
          Length = 556

 Score = 35.0 bits (79), Expect = 0.073
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 118 EGDSRGGAGGEASDPESAASSLSGASEEGSASERRRQKQKGG---ASRRRFGKPKARERQ 174
           + ++ GG  GE  +  S  SS  G +   S+S     + KGG   + RR    P     +
Sbjct: 371 DSEAGGGPQGERKNRSSKKSSRKGRTRSSSSSSDGSPEAKGGKAGSGRRGEDHPAVMRLK 430

Query: 175 RVKDADGVLCRYKKILGT 192
           R   A G    YKK+LG+
Sbjct: 431 RYIRACGAHRNYKKLLGS 448


>gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]
          Length = 352

 Score = 35.0 bits (79), Expect = 0.073
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 104 AEDHCRMKPGPRRMEGDSRGGAGGEASDPESAASSLS---GASEEGSASERRRQKQKGGA 160
           AE+  + K   R     S   +   +S   S++SS S   G  + G   ++RR+K+K   
Sbjct: 175 AEERSKQKARRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRK 234

Query: 161 SRRRFGKPKARERQ 174
             ++ GK KA  +Q
Sbjct: 235 KLKKKGKEKAEAQQ 248


>gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]
          Length = 338

 Score = 34.7 bits (78), Expect = 0.096
 Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 3/112 (2%)

Query: 66  HMALERNSWLQKRIEDLEEERDFLRCQLDKFISSARMEAEDHCRMKPGPRRMEGDSRGGA 125
           H+   + S  + R      E+   + + D   + +   +++  + K   R     S   +
Sbjct: 126 HVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQERSKQKARRRTRSSSSSSSS 185

Query: 126 GGEASDPESAASSLS---GASEEGSASERRRQKQKGGASRRRFGKPKARERQ 174
              +S   S++SS S   G  + G   ++RR+K+K     ++ GK KA  +Q
Sbjct: 186 SSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQ 237


>gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]
          Length = 341

 Score = 34.7 bits (78), Expect = 0.096
 Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 3/112 (2%)

Query: 66  HMALERNSWLQKRIEDLEEERDFLRCQLDKFISSARMEAEDHCRMKPGPRRMEGDSRGGA 125
           H+   + S  + R      E+   + + D   + +   +++  + K   R     S   +
Sbjct: 126 HVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQERSKQKARRRTRSSSSSSSS 185

Query: 126 GGEASDPESAASSLS---GASEEGSASERRRQKQKGGASRRRFGKPKARERQ 174
              +S   S++SS S   G  + G   ++RR+K+K     ++ GK KA  +Q
Sbjct: 186 SSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQ 237


>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
          Length = 841

 Score = 34.7 bits (78), Expect = 0.096
 Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 15/180 (8%)

Query: 3   DRSSRRRTMKDDETFEISIPFDEAPHLDPQIFYSLSPSRRNFEEPPEAASSALALMNS-- 60
           D+S  +R   +++  E + P   AP   P    S +P+    E+PP    +  A++ S  
Sbjct: 525 DKSQSKRRASNEK--ESAAPASPAPSPAP----SPTPAPPQKEQPPAETPTDAAVLTSPP 578

Query: 61  -----VKTQLHMALERNSWLQKRIEDLEEERDFLRCQLDKFISSARMEAEDHCRMKPGPR 115
                V     MA   +     R+  L E+R   R Q ++     R++AE   RM+    
Sbjct: 579 APAPPVTPSKPMAGTTDREEATRL--LAEKRRQAREQREREEQERRLQAERDKRMREEQL 636

Query: 116 RMEGDSRGGAGGEASDPESAASSLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQR 175
             E ++R     EA   E   +     +E+      ++QK++  A  R   + +  ER++
Sbjct: 637 AREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREK 696


>gi|239754487 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 424

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 12/86 (13%)

Query: 113 GPRRMEGDSRGGAGGEASDPESAASSLSGASEEGSASERRRQKQKGGASRRRFGKPKARE 172
           G R  EG   G  G      E       G  + G     R + +KGG   R+ GK   RE
Sbjct: 210 GERGREGGKEGREGRRKERKEGREGGREGGKKRG-----REEGRKGGVKERKEGKEGRRE 264

Query: 173 RQRV-------KDADGVLCRYKKILG 191
           ++++       K   G    YK +LG
Sbjct: 265 KRKLAIPSNFGKTEKGFSSLYKTLLG 290


>gi|169166609 PREDICTED: similar to ribonucleic acid binding protein
           S1 isoform 6 [Homo sapiens]
          Length = 305

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 3/102 (2%)

Query: 77  KRIEDLEEERDFLRCQLDKFISSARMEAEDHCRMKPGPRRMEGDSRGGAGGEASDPESAA 136
           K   + +  RD  R +      S+   +        G     G S G +   AS    ++
Sbjct: 50  KESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109

Query: 137 S---SLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQR 175
           S   S S +S  GS S  RR+      SR +   PK  E++R
Sbjct: 110 STSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKER 151


>gi|239749042 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 424

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 12/86 (13%)

Query: 113 GPRRMEGDSRGGAGGEASDPESAASSLSGASEEGSASERRRQKQKGGASRRRFGKPKARE 172
           G R  EG   G  G      E       G  + G     R + +KGG   R+ GK   RE
Sbjct: 210 GERGREGGKEGREGRRKERKEGREGGREGGKKRG-----REEGRKGGVKERKEGKEGRRE 264

Query: 173 RQRV-------KDADGVLCRYKKILG 191
           ++++       K   G    YK +LG
Sbjct: 265 KRKLAIPSNFGKTEKGFSSLYKTLLG 290


>gi|113415994 PREDICTED: similar to ribonucleic acid binding protein
           S1 isoform 2 [Homo sapiens]
          Length = 305

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 3/102 (2%)

Query: 77  KRIEDLEEERDFLRCQLDKFISSARMEAEDHCRMKPGPRRMEGDSRGGAGGEASDPESAA 136
           K   + +  RD  R +      S+   +        G     G S G +   AS    ++
Sbjct: 50  KESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109

Query: 137 S---SLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQR 175
           S   S S +S  GS S  RR+      SR +   PK  E++R
Sbjct: 110 STSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKER 151


>gi|239743067 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 424

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 12/86 (13%)

Query: 113 GPRRMEGDSRGGAGGEASDPESAASSLSGASEEGSASERRRQKQKGGASRRRFGKPKARE 172
           G R  EG   G  G      E       G  + G     R + +KGG   R+ GK   RE
Sbjct: 210 GERGREGGKEGREGRRKERKEGREGGREGGKKRG-----REEGRKGGVKERKEGKEGRRE 264

Query: 173 RQRV-------KDADGVLCRYKKILG 191
           ++++       K   G    YK +LG
Sbjct: 265 KRKLAIPSNFGKTEKGFSSLYKTLLG 290


>gi|239508713 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 424

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 12/86 (13%)

Query: 113 GPRRMEGDSRGGAGGEASDPESAASSLSGASEEGSASERRRQKQKGGASRRRFGKPKARE 172
           G R  EG   G  G      E       G  + G     R + +KGG   R+ GK   RE
Sbjct: 210 GERGREGGKEGREGRRKERKEGREGGREGGKKRG-----REEGRKGGVKERKEGKEGRRE 264

Query: 173 RQRV-------KDADGVLCRYKKILG 191
           ++++       K   G    YK +LG
Sbjct: 265 KRKLAIPSNFGKTEKGFSSLYKTLLG 290


>gi|22748877 basic helix-loop-helix domain containing, class B, 5
           [Homo sapiens]
          Length = 381

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 20/72 (27%), Positives = 31/72 (43%)

Query: 119 GDSRGGAGGEASDPESAASSLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQRVKD 178
           G   GG GG +S   S     SG+   GS+S      +K    +       ARER+R+ D
Sbjct: 198 GGLGGGGGGGSSSGSSGGGGGSGSGSGGSSSSSSSSSKKSKEQKALRLNINARERRRMHD 257

Query: 179 ADGVLCRYKKIL 190
            +  L   + ++
Sbjct: 258 LNDALDELRAVI 269


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 126 GGEASDPESAASSLS-GASEEGSASERRRQKQKGGASRRRFGKPKARERQRVKDA 179
           G E+  P SA SS   G    G A  RRR++++   SR     P+ R R+R + A
Sbjct: 360 GKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPA 414


>gi|6857826 RNA-binding protein S1, serine-rich domain [Homo
           sapiens]
          Length = 305

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 3/102 (2%)

Query: 77  KRIEDLEEERDFLRCQLDKFISSARMEAEDHCRMKPGPRRMEGDSRGGAGGEASDPESAA 136
           K   + +  RD  R +      S+   +        G     G S G +   AS    ++
Sbjct: 50  KESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109

Query: 137 S---SLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQR 175
           S   S S +S  GS S  RR+      SR +   PK  E++R
Sbjct: 110 STSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKER 151


>gi|18379334 RNA-binding protein S1, serine-rich domain [Homo
           sapiens]
          Length = 305

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 3/102 (2%)

Query: 77  KRIEDLEEERDFLRCQLDKFISSARMEAEDHCRMKPGPRRMEGDSRGGAGGEASDPESAA 136
           K   + +  RD  R +      S+   +        G     G S G +   AS    ++
Sbjct: 50  KESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109

Query: 137 S---SLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQR 175
           S   S S +S  GS S  RR+      SR +   PK  E++R
Sbjct: 110 STSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKER 151


>gi|58530840 desmoplakin isoform I [Homo sapiens]
          Length = 2871

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 19/52 (36%), Positives = 30/52 (57%)

Query: 49   EAASSALALMNSVKTQLHMALERNSWLQKRIEDLEEERDFLRCQLDKFISSA 100
            EA S   A +  +++QL ++  R   LQ  I DL+ ER+ LR +++KF   A
Sbjct: 1740 EADSDKNATILELRSQLQISNNRTLELQGLINDLQRERENLRQEIEKFQKQA 1791


>gi|169167080 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 197

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 10/102 (9%)

Query: 97  ISSARMEAEDHCRMKPGPRRMEGDSR--GGAGGEASDPESAASS--LSGASEEGSASERR 152
           +S+ R E +     +P PR   G      G G  A+ P   + S  LS A +   + ERR
Sbjct: 75  LSTKRPERQASLLPRPAPRGSTGAQVWWAGPGAAAAPPHPGSGSVPLSQALQSPGSQERR 134

Query: 153 RQKQKGGASRRRFGKPKARERQRV--KDADGVLCRYKKILGT 192
           R++++    +R    P+A+ R+    + A GV C   ++LG+
Sbjct: 135 RRRRR----QRPASSPEAKWRRLEGGRAAAGVRCVPSRLLGS 172


>gi|113415504 PREDICTED: similar to ribonucleic acid binding protein
           S1 [Homo sapiens]
          Length = 305

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 3/102 (2%)

Query: 77  KRIEDLEEERDFLRCQLDKFISSARMEAEDHCRMKPGPRRMEGDSRGGAGGEASDPESAA 136
           K   + +  RD  R +      S+   +        G     G S G +   AS    ++
Sbjct: 50  KESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109

Query: 137 S---SLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQR 175
           S   S S +S  GS S  RR+      SR +   PK  E++R
Sbjct: 110 STSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKER 151


>gi|169166499 PREDICTED: similar to ribonucleic acid binding protein
           S1 [Homo sapiens]
          Length = 305

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 3/102 (2%)

Query: 77  KRIEDLEEERDFLRCQLDKFISSARMEAEDHCRMKPGPRRMEGDSRGGAGGEASDPESAA 136
           K   + +  RD  R +      S+   +        G     G S G +   AS    ++
Sbjct: 50  KESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109

Query: 137 S---SLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQR 175
           S   S S +S  GS S  RR+      SR +   PK  E++R
Sbjct: 110 STSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKER 151


>gi|113415498 PREDICTED: similar to ribonucleic acid binding protein
           S1 [Homo sapiens]
          Length = 305

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 3/102 (2%)

Query: 77  KRIEDLEEERDFLRCQLDKFISSARMEAEDHCRMKPGPRRMEGDSRGGAGGEASDPESAA 136
           K   + +  RD  R +      S+   +        G     G S G +   AS    ++
Sbjct: 50  KESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109

Query: 137 S---SLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQR 175
           S   S S +S  GS S  RR+      SR +   PK  E++R
Sbjct: 110 STSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKER 151


>gi|88973230 PREDICTED: similar to ribonucleic acid binding protein
           S1 isoform 3 [Homo sapiens]
          Length = 305

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 3/102 (2%)

Query: 77  KRIEDLEEERDFLRCQLDKFISSARMEAEDHCRMKPGPRRMEGDSRGGAGGEASDPESAA 136
           K   + +  RD  R +      S+   +        G     G S G +   AS    ++
Sbjct: 50  KESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSS 109

Query: 137 S---SLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQR 175
           S   S S +S  GS S  RR+      SR +   PK  E++R
Sbjct: 110 STSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKER 151


>gi|192807334 arsenate resistance protein 2 isoform d [Homo sapiens]
          Length = 872

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)

Query: 127 GEASDPESAASSLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQRVKDADGVLCR 185
           G+ S  E + S     SE G A E + + ++    +    KPK  E ++ KDA G+ C+
Sbjct: 358 GDDSFDEGSVSESESESESGQAEEEKEEAEEALKEKE---KPKEEEWEKPKDAAGLECK 413


>gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens]
          Length = 876

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)

Query: 127 GEASDPESAASSLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQRVKDADGVLCR 185
           G+ S  E + S     SE G A E + + ++    +    KPK  E ++ KDA G+ C+
Sbjct: 358 GDDSFDEGSVSESESESESGQAEEEKEEAEEALKEKE---KPKEEEWEKPKDAAGLECK 413


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.131    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,956,590
Number of Sequences: 37866
Number of extensions: 500750
Number of successful extensions: 4019
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 3622
Number of HSP's gapped (non-prelim): 526
length of query: 280
length of database: 18,247,518
effective HSP length: 101
effective length of query: 179
effective length of database: 14,423,052
effective search space: 2581726308
effective search space used: 2581726308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.