Search of human proteins with 93102393

Search of human proteins with 93102393

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|93102393 hypothetical protein LOC84326 isoform c [Homo
sapiens]
         (107 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|93102393 hypothetical protein LOC84326 isoform c [Homo sapiens]    219   4e-58
gi|93102395 hypothetical protein LOC84326 isoform d [Homo sapiens]    207   1e-54
gi|93102401 hypothetical protein LOC84326 isoform g [Homo sapiens]    134   2e-32
gi|93102391 hypothetical protein LOC84326 isoform b [Homo sapiens]    134   2e-32
gi|93102387 hypothetical protein LOC84326 isoform a [Homo sapiens]    134   2e-32
gi|239755684 PREDICTED: hypothetical protein [Homo sapiens]            27   3.5  
gi|239750147 PREDICTED: hypothetical protein [Homo sapiens]            27   3.5  
gi|239744457 PREDICTED: hypothetical protein [Homo sapiens]            27   3.5  
gi|226530908 protein-L-isoaspartate (D-aspartate) O-methyltransf...    26   7.9  
gi|13376349 PDZ domain containing 7 [Homo sapiens]                     26   7.9  
gi|21264330 mindbomb homolog 2 [Homo sapiens]                          26   7.9  

>gi|93102393 hypothetical protein LOC84326 isoform c [Homo sapiens]
          Length = 107

 Score =  219 bits (558), Expect = 4e-58
 Identities = 107/107 (100%), Positives = 107/107 (100%)

Query: 1   MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60
           MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD
Sbjct: 1   MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60

Query: 61  QRCLDRNPEWGLRDTALLEDLGKASGLLLERMVDMPANNKCLIFRKN 107
           QRCLDRNPEWGLRDTALLEDLGKASGLLLERMVDMPANNKCLIFRKN
Sbjct: 61  QRCLDRNPEWGLRDTALLEDLGKASGLLLERMVDMPANNKCLIFRKN 107


>gi|93102395 hypothetical protein LOC84326 isoform d [Homo sapiens]
          Length = 127

 Score =  207 bits (527), Expect = 1e-54
 Identities = 107/127 (84%), Positives = 107/127 (84%), Gaps = 20/127 (15%)

Query: 1   MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60
           MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD
Sbjct: 1   MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60

Query: 61  QRCLDR--------------------NPEWGLRDTALLEDLGKASGLLLERMVDMPANNK 100
           QRCLDR                    NPEWGLRDTALLEDLGKASGLLLERMVDMPANNK
Sbjct: 61  QRCLDRGSSEQQDTCSNPGPCSSPTGNPEWGLRDTALLEDLGKASGLLLERMVDMPANNK 120

Query: 101 CLIFRKN 107
           CLIFRKN
Sbjct: 121 CLIFRKN 127


>gi|93102401 hypothetical protein LOC84326 isoform g [Homo
          sapiens]
          Length = 185

 Score =  134 bits (337), Expect = 2e-32
 Identities = 65/65 (100%), Positives = 65/65 (100%)

Query: 1  MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60
          MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD
Sbjct: 1  MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60

Query: 61 QRCLD 65
          QRCLD
Sbjct: 61 QRCLD 65


>gi|93102391 hypothetical protein LOC84326 isoform b [Homo
          sapiens]
          Length = 205

 Score =  134 bits (337), Expect = 2e-32
 Identities = 65/65 (100%), Positives = 65/65 (100%)

Query: 1  MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60
          MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD
Sbjct: 1  MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60

Query: 61 QRCLD 65
          QRCLD
Sbjct: 61 QRCLD 65


>gi|93102387 hypothetical protein LOC84326 isoform a [Homo
          sapiens]
          Length = 204

 Score =  134 bits (337), Expect = 2e-32
 Identities = 65/65 (100%), Positives = 65/65 (100%)

Query: 1  MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60
          MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD
Sbjct: 1  MLVAAAAERNKDPILHVLRQYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSDVD 60

Query: 61 QRCLD 65
          QRCLD
Sbjct: 61 QRCLD 65



 Score = 90.9 bits (224), Expect = 2e-19
 Identities = 45/50 (90%), Positives = 46/50 (92%), Gaps = 2/50 (4%)

Query: 58  DVDQRCLDRNPEWGLRDTALLEDLGKASGLLLERMVDMPANNKCLIFRKN 107
           D+  RC  RNPEWGLRDTALLEDLGKASGLLLERMVDMPANNKCLIFRKN
Sbjct: 157 DLMLRC--RNPEWGLRDTALLEDLGKASGLLLERMVDMPANNKCLIFRKN 204


>gi|239755684 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 415

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 38  SGQHAAHFARAFPLAEWQPSDVDQRCLDRNPEWGLRDTALLED 80
           SG+   HF     L+EW    VD     ++    + DT  LED
Sbjct: 70  SGEDFVHFENICLLSEWNKQRVDNHGSQQDINHKVNDTEQLED 112


>gi|239750147 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 415

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 38  SGQHAAHFARAFPLAEWQPSDVDQRCLDRNPEWGLRDTALLED 80
           SG+   HF     L+EW    VD     ++    + DT  LED
Sbjct: 70  SGEDFVHFENICLLSEWNKQRVDNHGSQQDINHKVNDTEQLED 112


>gi|239744457 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 351

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 38 SGQHAAHFARAFPLAEWQPSDVDQRCLDRNPEWGLRDTALLED 80
          SG+   HF     L+EW    VD     ++    + DT  LED
Sbjct: 6  SGEDFVHFENICLLSEWNKQRVDNHGSQQDINHKVNDTEQLED 48


>gi|226530908 protein-L-isoaspartate (D-aspartate)
           O-methyltransferase 1 [Homo sapiens]
          Length = 285

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 16  HVLRQYLDPAQRGVRVLEVASGSGQHAAHFAR 47
           + L    D    G + L+V SGSG   A FAR
Sbjct: 125 YALELLFDQLHEGAKALDVGSGSGILTACFAR 156


>gi|13376349 PDZ domain containing 7 [Homo sapiens]
          Length = 517

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 8/65 (12%)

Query: 21  YLDPAQRGV-RVLEVASGSGQHAAHFARAFPLAEWQ-PSDVDQRCL------DRNPEWGL 72
           +LD    GV + L  AS S    +  A + P +    PSD    CL       R P WG 
Sbjct: 306 WLDRLSNGVLQQLSPASESSSSVSSCASSAPYSSGSLPSDRMDICLGQEEPGSRGPGWGR 365

Query: 73  RDTAL 77
            DTA+
Sbjct: 366 ADTAM 370


>gi|21264330 mindbomb homolog 2 [Homo sapiens]
          Length = 1013

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 10/64 (15%)

Query: 3   VAAAAERNKDPI---LHVLR-QYLDPAQRGVRVLEVASGSGQHAAHFARAFPLAEWQPSD 58
           VA  A  NK  +   L  LR Q  DP   G  V+EVA G+       ARA  L   +P  
Sbjct: 463 VAERARENKSSLSVALDKLRAQKSDPEHPGRLVVEVALGNA------ARALDLLRRRPEQ 516

Query: 59  VDQR 62
           VD +
Sbjct: 517 VDTK 520


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,026,873
Number of Sequences: 37866
Number of extensions: 157298
Number of successful extensions: 294
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 283
Number of HSP's gapped (non-prelim): 12
length of query: 107
length of database: 18,247,518
effective HSP length: 77
effective length of query: 30
effective length of database: 15,331,836
effective search space: 459955080
effective search space used: 459955080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.