Guide to the Human Genome
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Name: LOC650293 Sequence: fasta or formatted (216aa) NCBI GI: 91206428
Description:

seven transmembrane helix receptor

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         11           1
 C cysteine            4.6         10           1
 D aspartate           4.2          9           1
 E glutamate           1.4          3           1
 F phenylalanine       8.3         18           2
 G glycine             1.9          4           1
 H histidine           3.2          7           1
 I isoleucine          9.3         20           2
 K lysine              2.8          6           1
 L leucine            13.0         28           2
 M methionine          4.6         10           1
 N asparagine          3.2          7           1
 P proline             3.7          8           1
 Q glutamine           2.3          5           1
 R arginine            1.9          4           1
 S serine             12.5         27           3
 T threonine           4.6         10           1
 V valine              8.8         19           2
 W tryptophan          0.9          2           1
 Y tyrosine            3.7          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   seven transmembrane helix receptor 
OR7E24                0.707   olfactory receptor, family 7, subfamily E, member 2...
OR7C2                 0.522   olfactory receptor, family 7, subfamily C, member 2 ...
OR7A10                0.515   olfactory receptor, family 7, subfamily A, member 10...
OR7D4                 0.507   olfactory receptor, family 7, subfamily D, member 4 ...
OR7A17                0.502   olfactory receptor, family 7, subfamily A, member 17...
OR7C1                 0.500   olfactory receptor, family 7, subfamily C, member 1 ...
OR7G3                 0.500   olfactory receptor, family 7, subfamily G, member 3 ...
OR7G1                 0.495   olfactory receptor, family 7, subfamily G, member 1 ...
OR7D2                 0.495   olfactory receptor, family 7, subfamily D, member 2 ...
OR7A5                 0.493   olfactory receptor, family 7, subfamily A, member 5 [...
OR7G2                 0.478   olfactory receptor, family 7, subfamily G, member 2 ...
OR1G1                 0.441   olfactory receptor, family 1, subfamily G, member 1 ...
OR1N2                 0.429   olfactory receptor, family 1, subfamily N, member 2 ...
OR1S1                 0.429   olfactory receptor, family 1, subfamily S, member 1 ...
OR1D2                 0.417   olfactory receptor, family 1, subfamily D, member 2 [...
OR1N1                 0.412   olfactory receptor, family 1, subfamily N, member 1 ...
OR1J2                 0.402   olfactory receptor, family 1, subfamily J, member 2 ...
OR1E1                 0.395   olfactory receptor, family 1, subfamily E, member 1...
OR1F1                 0.393   olfactory receptor, family 1, subfamily F, member 1 [...
OR1D5                 0.388   olfactory receptor, family 1, subfamily D, member 5 [...
OR1J4                 0.388   olfactory receptor, family 1, subfamily J, member 4 ...
OR1D4                 0.388   olfactory receptor, family 1, subfamily D, member 4...
OR1C1                 0.385   olfactory receptor, family 1, subfamily C, member 1...
OR6Y1                 0.385   olfactory receptor, family 6, subfamily Y, member 1 ...
OR1S2                 0.383   olfactory receptor, family 1, subfamily S, member 2 ...
OR1J1                 0.378   olfactory receptor, family 1, subfamily J, member 1 ...
OR1E2                 0.378   olfactory receptor, family 1, subfamily E, member 2 ...
OR1L4                 0.376   olfactory receptor, family 1, subfamily L, member 4 ...
OR1M1                 0.373   olfactory receptor, family 1, subfamily M, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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