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Search of human proteins with 9055272
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9055272 McKusick-Kaufman syndrome protein [Homo sapiens]
(570 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9055272 McKusick-Kaufman syndrome protein [Homo sapiens] 1140 0.0
gi|25914754 McKusick-Kaufman syndrome protein [Homo sapiens] 1140 0.0
gi|63162572 chaperonin containing TCP1, subunit 3 isoform a [Hom... 76 7e-14
gi|58761486 chaperonin containing TCP1, subunit 3 isoform b [Hom... 76 9e-14
gi|38455427 chaperonin containing TCP1, subunit 4 (delta) [Homo ... 62 1e-09
gi|58761484 chaperonin containing TCP1, subunit 3 isoform c [Hom... 56 8e-08
gi|24307939 chaperonin containing TCP1, subunit 5 (epsilon) [Hom... 53 9e-07
gi|5453603 chaperonin containing TCP1, subunit 2 [Homo sapiens] 49 2e-05
gi|48762932 chaperonin containing TCP1, subunit 8 (theta) [Homo ... 47 4e-05
gi|7657253 T-complex protein 1 [Homo sapiens] 41 0.003
gi|5453607 chaperonin containing TCP1, subunit 7 isoform a [Homo... 40 0.006
gi|57863257 T-complex protein 1 isoform a [Homo sapiens] 40 0.008
gi|100816407 Bardet-Biedl syndrome 10 [Homo sapiens] 39 0.017
gi|58331185 chaperonin containing TCP1, subunit 7 isoform b [Hom... 33 0.92
gi|57863259 T-complex protein 1 isoform b [Homo sapiens] 32 1.2
gi|225690529 golgin, RAB6-interacting isoform a [Homo sapiens] 30 6.0
gi|225690532 golgin, RAB6-interacting isoform b [Homo sapiens] 30 6.0
gi|52627141 olfactory receptor, family 9, subfamily Q, member 2 ... 30 6.0
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 30 7.8
gi|239746217 PREDICTED: zinc finger protein 66 [Homo sapiens] 30 7.8
>gi|9055272 McKusick-Kaufman syndrome protein [Homo sapiens]
Length = 570
Score = 1140 bits (2949), Expect = 0.0
Identities = 570/570 (100%), Positives = 570/570 (100%)
Query: 1 MSRLEAKKPSLCKSEPLTTERVRTTLSVLKRIVTSCYGPSGRLKQLHNGFGGYVCTTSQS 60
MSRLEAKKPSLCKSEPLTTERVRTTLSVLKRIVTSCYGPSGRLKQLHNGFGGYVCTTSQS
Sbjct: 1 MSRLEAKKPSLCKSEPLTTERVRTTLSVLKRIVTSCYGPSGRLKQLHNGFGGYVCTTSQS 60
Query: 61 SALLSHLLVTHPILKILTASIQNHVSSFSDCGLFTAILCCNLIENVQRLGLTPTTVIRLN 120
SALLSHLLVTHPILKILTASIQNHVSSFSDCGLFTAILCCNLIENVQRLGLTPTTVIRLN
Sbjct: 61 SALLSHLLVTHPILKILTASIQNHVSSFSDCGLFTAILCCNLIENVQRLGLTPTTVIRLN 120
Query: 121 KHLLSLCISYLKSETCGCRIPVDFSSTQILLCLVRSILTSKPACMLTRKETEHVSALILR 180
KHLLSLCISYLKSETCGCRIPVDFSSTQILLCLVRSILTSKPACMLTRKETEHVSALILR
Sbjct: 121 KHLLSLCISYLKSETCGCRIPVDFSSTQILLCLVRSILTSKPACMLTRKETEHVSALILR 180
Query: 181 AFLLTIPENAEGHIILGKSLIVPLKGQRVIDSTVLPGILIEMSEVQLMRLLPIKKSTALK 240
AFLLTIPENAEGHIILGKSLIVPLKGQRVIDSTVLPGILIEMSEVQLMRLLPIKKSTALK
Sbjct: 181 AFLLTIPENAEGHIILGKSLIVPLKGQRVIDSTVLPGILIEMSEVQLMRLLPIKKSTALK 240
Query: 241 VALFCTTLSGDTSDTGEGTVVVSYGVSLENAVLDQLLNLGRQLISDHVDLVLCQKVIHPS 300
VALFCTTLSGDTSDTGEGTVVVSYGVSLENAVLDQLLNLGRQLISDHVDLVLCQKVIHPS
Sbjct: 241 VALFCTTLSGDTSDTGEGTVVVSYGVSLENAVLDQLLNLGRQLISDHVDLVLCQKVIHPS 300
Query: 301 LKQFLNMHRIIAIDRIGVTLMEPLTKMTGTQPIGSLGSICPNSYGSVKDVCTAKFGSKHF 360
LKQFLNMHRIIAIDRIGVTLMEPLTKMTGTQPIGSLGSICPNSYGSVKDVCTAKFGSKHF
Sbjct: 301 LKQFLNMHRIIAIDRIGVTLMEPLTKMTGTQPIGSLGSICPNSYGSVKDVCTAKFGSKHF 360
Query: 361 FHLIPNEATICSLLLCNRNDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCTETHLAAY 420
FHLIPNEATICSLLLCNRNDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCTETHLAAY
Sbjct: 361 FHLIPNEATICSLLLCNRNDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCTETHLAAY 420
Query: 421 IRHKTHNDPESILKDDECTQTELQLIAEAFCSALESVVGSLEHDGGEILTDMKYGHLWSV 480
IRHKTHNDPESILKDDECTQTELQLIAEAFCSALESVVGSLEHDGGEILTDMKYGHLWSV
Sbjct: 421 IRHKTHNDPESILKDDECTQTELQLIAEAFCSALESVVGSLEHDGGEILTDMKYGHLWSV 480
Query: 481 QADSPCVANWPDLLSQCGCGLYNSQEELNWSFLRSTRRPFVPQSCLPHEAVGSASNLTLD 540
QADSPCVANWPDLLSQCGCGLYNSQEELNWSFLRSTRRPFVPQSCLPHEAVGSASNLTLD
Sbjct: 481 QADSPCVANWPDLLSQCGCGLYNSQEELNWSFLRSTRRPFVPQSCLPHEAVGSASNLTLD 540
Query: 541 CLTAKLSGLQVAVETANLILDLSYVIEDKN 570
CLTAKLSGLQVAVETANLILDLSYVIEDKN
Sbjct: 541 CLTAKLSGLQVAVETANLILDLSYVIEDKN 570
>gi|25914754 McKusick-Kaufman syndrome protein [Homo sapiens]
Length = 570
Score = 1140 bits (2949), Expect = 0.0
Identities = 570/570 (100%), Positives = 570/570 (100%)
Query: 1 MSRLEAKKPSLCKSEPLTTERVRTTLSVLKRIVTSCYGPSGRLKQLHNGFGGYVCTTSQS 60
MSRLEAKKPSLCKSEPLTTERVRTTLSVLKRIVTSCYGPSGRLKQLHNGFGGYVCTTSQS
Sbjct: 1 MSRLEAKKPSLCKSEPLTTERVRTTLSVLKRIVTSCYGPSGRLKQLHNGFGGYVCTTSQS 60
Query: 61 SALLSHLLVTHPILKILTASIQNHVSSFSDCGLFTAILCCNLIENVQRLGLTPTTVIRLN 120
SALLSHLLVTHPILKILTASIQNHVSSFSDCGLFTAILCCNLIENVQRLGLTPTTVIRLN
Sbjct: 61 SALLSHLLVTHPILKILTASIQNHVSSFSDCGLFTAILCCNLIENVQRLGLTPTTVIRLN 120
Query: 121 KHLLSLCISYLKSETCGCRIPVDFSSTQILLCLVRSILTSKPACMLTRKETEHVSALILR 180
KHLLSLCISYLKSETCGCRIPVDFSSTQILLCLVRSILTSKPACMLTRKETEHVSALILR
Sbjct: 121 KHLLSLCISYLKSETCGCRIPVDFSSTQILLCLVRSILTSKPACMLTRKETEHVSALILR 180
Query: 181 AFLLTIPENAEGHIILGKSLIVPLKGQRVIDSTVLPGILIEMSEVQLMRLLPIKKSTALK 240
AFLLTIPENAEGHIILGKSLIVPLKGQRVIDSTVLPGILIEMSEVQLMRLLPIKKSTALK
Sbjct: 181 AFLLTIPENAEGHIILGKSLIVPLKGQRVIDSTVLPGILIEMSEVQLMRLLPIKKSTALK 240
Query: 241 VALFCTTLSGDTSDTGEGTVVVSYGVSLENAVLDQLLNLGRQLISDHVDLVLCQKVIHPS 300
VALFCTTLSGDTSDTGEGTVVVSYGVSLENAVLDQLLNLGRQLISDHVDLVLCQKVIHPS
Sbjct: 241 VALFCTTLSGDTSDTGEGTVVVSYGVSLENAVLDQLLNLGRQLISDHVDLVLCQKVIHPS 300
Query: 301 LKQFLNMHRIIAIDRIGVTLMEPLTKMTGTQPIGSLGSICPNSYGSVKDVCTAKFGSKHF 360
LKQFLNMHRIIAIDRIGVTLMEPLTKMTGTQPIGSLGSICPNSYGSVKDVCTAKFGSKHF
Sbjct: 301 LKQFLNMHRIIAIDRIGVTLMEPLTKMTGTQPIGSLGSICPNSYGSVKDVCTAKFGSKHF 360
Query: 361 FHLIPNEATICSLLLCNRNDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCTETHLAAY 420
FHLIPNEATICSLLLCNRNDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCTETHLAAY
Sbjct: 361 FHLIPNEATICSLLLCNRNDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCTETHLAAY 420
Query: 421 IRHKTHNDPESILKDDECTQTELQLIAEAFCSALESVVGSLEHDGGEILTDMKYGHLWSV 480
IRHKTHNDPESILKDDECTQTELQLIAEAFCSALESVVGSLEHDGGEILTDMKYGHLWSV
Sbjct: 421 IRHKTHNDPESILKDDECTQTELQLIAEAFCSALESVVGSLEHDGGEILTDMKYGHLWSV 480
Query: 481 QADSPCVANWPDLLSQCGCGLYNSQEELNWSFLRSTRRPFVPQSCLPHEAVGSASNLTLD 540
QADSPCVANWPDLLSQCGCGLYNSQEELNWSFLRSTRRPFVPQSCLPHEAVGSASNLTLD
Sbjct: 481 QADSPCVANWPDLLSQCGCGLYNSQEELNWSFLRSTRRPFVPQSCLPHEAVGSASNLTLD 540
Query: 541 CLTAKLSGLQVAVETANLILDLSYVIEDKN 570
CLTAKLSGLQVAVETANLILDLSYVIEDKN
Sbjct: 541 CLTAKLSGLQVAVETANLILDLSYVIEDKN 570
>gi|63162572 chaperonin containing TCP1, subunit 3 isoform a [Homo
sapiens]
Length = 545
Score = 76.3 bits (186), Expect = 7e-14
Identities = 89/402 (22%), Positives = 165/402 (41%), Gaps = 19/402 (4%)
Query: 32 IVTSCYGPSGRLKQLHNGFGGYVCTTSQSSALLSHLLVTHPILKILTASIQNHVSSFSDC 91
I+ +C GP +K L + GG V T + +A+L + V HP K + + D
Sbjct: 36 IIRTCLGPKSMMKMLLDPMGGIVMT-NDGNAILREIQVQHPAAKSMIEISRTQDEEVGDG 94
Query: 92 GLFTAILCCNLI---ENVQRLGLTPTTVIRLNKHLLSLCISYLKSETCGCRIPVDFSSTQ 148
IL ++ E+ + PT VI + L IS LK + IPVD S +
Sbjct: 95 TTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKIS----IPVDISDSD 150
Query: 149 ILLCLVRSILTSKPACMLTRKETEHVSALILRAFLLTIPENAEGHIILGK-SLIVPLKGQ 207
++L ++ S +T+K ++R + + + ++ EN I + K + + + G
Sbjct: 151 MMLNIINSSITTKA---ISRWSSLACNIALDAVKMVQFEENGRKEIDIKKYARVEKIPGG 207
Query: 208 RVIDSTVLPGILIEMSEVQLMRLLPIKKSTALKVALFCTTLSGDTSDTGEGTVVVSYG-- 265
+ DS VL G++I IK + + G++ E T +
Sbjct: 208 IIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRI 267
Query: 266 VSLENAVLDQLLNLGRQLISDHVDLVLCQKVIHPSLKQFLNMHRIIAIDRIGVTLMEPLT 325
+ +E + QL +I D+V+ +K I + +L I AI R+ T +
Sbjct: 268 LQMEEEYIQQLCE---DIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIA 324
Query: 326 KMTGTQPIGSLGSICPNSYGSVKDVCTAKFGSKHFFHLIPN--EATICSLLLCNRNDTAW 383
+ G + + + + G+ + K +F I + + C++LL +
Sbjct: 325 RACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGASKEIL 384
Query: 384 DELKLTCQTALHVLQLTLKEPWALLGGGCTETHLAAYIRHKT 425
E++ Q A+ V + L +P + GGG +E +A + K+
Sbjct: 385 SEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKS 426
>gi|58761486 chaperonin containing TCP1, subunit 3 isoform b [Homo
sapiens]
Length = 544
Score = 75.9 bits (185), Expect = 9e-14
Identities = 89/401 (22%), Positives = 165/401 (41%), Gaps = 18/401 (4%)
Query: 32 IVTSCYGPSGRLKQLHNGFGGYVCTTSQSSALLSHLLVTHPILKILTASIQNHVSSFSDC 91
I+ +C GP +K L + GG V T + +A+L + V HP K + + D
Sbjct: 36 IIRTCLGPKSMMKMLLDPMGGIVMT-NDGNAILREIQVQHPAAKSMIEISRTQDEEVGDG 94
Query: 92 GLFTAIL--CCNLIENVQRLGLTPTTVIRLNKHLLSLCISYLKSETCGCRIPVDFSSTQI 149
IL ++ E+ + PT VI + L IS LK + IPVD S + +
Sbjct: 95 TTSVIILGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKIS----IPVDISDSDM 150
Query: 150 LLCLVRSILTSKPACMLTRKETEHVSALILRAFLLTIPENAEGHIILGK-SLIVPLKGQR 208
+L ++ S +T+K ++R + + + ++ EN I + K + + + G
Sbjct: 151 MLNIINSSITTKA---ISRWSSLACNIALDAVKMVQFEENGRKEIDIKKYARVEKIPGGI 207
Query: 209 VIDSTVLPGILIEMSEVQLMRLLPIKKSTALKVALFCTTLSGDTSDTGEGTVVVSYG--V 266
+ DS VL G++I IK + + G++ E T + +
Sbjct: 208 IEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRIL 267
Query: 267 SLENAVLDQLLNLGRQLISDHVDLVLCQKVIHPSLKQFLNMHRIIAIDRIGVTLMEPLTK 326
+E + QL +I D+V+ +K I + +L I AI R+ T + +
Sbjct: 268 QMEEEYIQQLCE---DIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIAR 324
Query: 327 MTGTQPIGSLGSICPNSYGSVKDVCTAKFGSKHFFHLIPN--EATICSLLLCNRNDTAWD 384
G + + + + G+ + K +F I + + C++LL +
Sbjct: 325 ACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGASKEILS 384
Query: 385 ELKLTCQTALHVLQLTLKEPWALLGGGCTETHLAAYIRHKT 425
E++ Q A+ V + L +P + GGG +E +A + K+
Sbjct: 385 EVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKS 425
>gi|38455427 chaperonin containing TCP1, subunit 4 (delta) [Homo
sapiens]
Length = 539
Score = 62.4 bits (150), Expect = 1e-09
Identities = 94/450 (20%), Positives = 185/450 (41%), Gaps = 43/450 (9%)
Query: 33 VTSCYGPSGRLKQLHNGFGGYVCTTSQSSALLSHLLVTHPILKILTASIQNHVSSFSDCG 92
+ + GP G K + +G G V T+ + +L + V HP ++L + D
Sbjct: 48 IRTSLGPKGMDKMIQDGKGD-VTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGT 106
Query: 93 LFTAILCCNLIENVQRL---GLTPTTVIRLNKHLLSLCISYLKSETCGCRIPVDFSSTQI 149
I+ +L+++ +L G+ PT + + L I L + PV+ S +
Sbjct: 107 TSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSR----PVELSDRET 162
Query: 150 LLCLVRSILTSKPACMLTRKETEHVSALILRAFLLTIPENAEGHIILGKSLIVPLKGQRV 209
LL + L SK + + + +S + + A + I + L IV G +
Sbjct: 163 LLNSATTSLNSK----VVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTI 218
Query: 210 IDSTVLPGILIEMSEVQLMRLLPIKKSTALKVALFCTTLSGDTSDTGEGTVVVSYGVSLE 269
D ++ G+++ +V + ++K+ K+ L LS +D + +VVS ++
Sbjct: 219 DDCELVEGLVLTQ-KVSNSGITRVEKA---KIGLIQFCLSAPKTDM-DNQIVVSDYAQMD 273
Query: 270 NAVLDQ---LLNLGRQLISDHVDLVLCQK-VIHPSLKQ----FLNMHRIIAIDRIGVTLM 321
+ ++ +LNL +Q+ +++L QK ++ +L FLN +I+ I I +
Sbjct: 274 RVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVIKDIEREDI 333
Query: 322 EPLTKMTGTQPIGSLGSICPNSYGS---VKDVCTAKFGSKHFFHLIPNEATICSLLLCNR 378
E + K GT+P+ + + GS ++V G + ++++
Sbjct: 334 EFICKTIGTKPVAHIDQFTADMLGSAELAEEVNLNGSGKLLKITGCASPGKTVTIVVRGS 393
Query: 379 NDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCTETHLAAYIRH--KTHNDPESILKDD 436
N +E + + AL V++ +K+ + GGG E LA + +T + ES
Sbjct: 394 NKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMES----- 448
Query: 437 ECTQTELQLIAEAFCSALESVVGSLEHDGG 466
AF A+E + +L + G
Sbjct: 449 --------YCVRAFADAMEVIPSTLAENAG 470
>gi|58761484 chaperonin containing TCP1, subunit 3 isoform c [Homo
sapiens]
Length = 507
Score = 56.2 bits (134), Expect = 8e-08
Identities = 77/365 (21%), Positives = 145/365 (39%), Gaps = 18/365 (4%)
Query: 69 VTHPILKILTASIQNHVSSFSDCGLFTAILCCNLI---ENVQRLGLTPTTVIRLNKHLLS 125
V HP K + + D IL ++ E+ + PT VI + L
Sbjct: 34 VQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALD 93
Query: 126 LCISYLKSETCGCRIPVDFSSTQILLCLVRSILTSKPACMLTRKETEHVSALILRAFLLT 185
IS LK + IPVD S + ++L ++ S +T+K ++R + + + ++
Sbjct: 94 DMISTLKKIS----IPVDISDSDMMLNIINSSITTKA---ISRWSSLACNIALDAVKMVQ 146
Query: 186 IPENAEGHIILGK-SLIVPLKGQRVIDSTVLPGILIEMSEVQLMRLLPIKKSTALKVALF 244
EN I + K + + + G + DS VL G++I IK + +
Sbjct: 147 FEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSS 206
Query: 245 CTTLSGDTSDTGEGTVVVSYG--VSLENAVLDQLLNLGRQLISDHVDLVLCQKVIHPSLK 302
G++ E T + + +E + QL +I D+V+ +K I +
Sbjct: 207 LEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCE---DIIQLKPDVVITEKGISDLAQ 263
Query: 303 QFLNMHRIIAIDRIGVTLMEPLTKMTGTQPIGSLGSICPNSYGSVKDVCTAKFGSKHFFH 362
+L I AI R+ T + + G + + + + G+ + K +F
Sbjct: 264 HYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFT 323
Query: 363 LIPN--EATICSLLLCNRNDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCTETHLAAY 420
I + + C++LL + E++ Q A+ V + L +P + GGG +E +A
Sbjct: 324 FITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHA 383
Query: 421 IRHKT 425
+ K+
Sbjct: 384 LTEKS 388
>gi|24307939 chaperonin containing TCP1, subunit 5 (epsilon) [Homo
sapiens]
Length = 541
Score = 52.8 bits (125), Expect = 9e-07
Identities = 89/467 (19%), Positives = 178/467 (38%), Gaps = 37/467 (7%)
Query: 13 KSEPLTTERVRTTLSVLKRIVTSC---YGPSGRLKQLHNGFGGYVCTTSQSSALLSHLLV 69
KS + E +++ + K + + GP+G K + + G V T+ + +LS + V
Sbjct: 25 KSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGD-VTVTNDGATILSMMDV 83
Query: 70 THPILKILTASIQNHVSSFSDCGLFTAILCCNLIENVQRL---GLTPTTVIRLNKHLLSL 126
H I K++ ++ D +L L+E ++L G+ P + + +
Sbjct: 84 DHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARV 143
Query: 127 CISYLKSETCGCRIPVDFSSTQILLCLVRSILTSKPACMLTRKETEHVSALILRAFLLTI 186
I +L + + VD T+ L+ ++ L SK R+ E I +LT+
Sbjct: 144 AIEHL--DKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAE-----IAVNAVLTV 196
Query: 187 PENAEGHIILGKSLIVPLKGQRVIDSTVLPGILI--EMSEVQLMRLLPIKKSTALKVALF 244
+ + + G R+ D+ ++ G+++ + S Q+ KK K+A+
Sbjct: 197 ADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMP-----KKVEDAKIAIL 251
Query: 245 CTTLSGDTSDTGEGTVVVSYG--VSLENAVLDQLLNLGRQLISDHVDLVLCQKVIHPSLK 302
T V S +L+ ++ + +Q+ +L +CQ
Sbjct: 252 TCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEAN 311
Query: 303 QFLNMHRIIAIDRIGVTLMEPLTKMTGTQPIGSLGSICPNSYGSVKDVCTAKFGSKHFFH 362
L + + A+ +G +E + TG + + + G V FG+
Sbjct: 312 HLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKM 371
Query: 363 LIPNE---ATICSLLLCNRNDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCTETHLAA 419
L+ + + ++ + N +E K + AL V++ +++ + GGG E A
Sbjct: 372 LVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCAL 431
Query: 420 YIRHKTHNDPESILKDDECTQTELQLIAEAFCSALESVVGSLEHDGG 466
+ + D+C E Q AF ALE + +L + G
Sbjct: 432 AVSQEA----------DKCPTLE-QYAMRAFADALEVIPMALSENSG 467
>gi|5453603 chaperonin containing TCP1, subunit 2 [Homo sapiens]
Length = 535
Score = 48.5 bits (114), Expect = 2e-05
Identities = 84/413 (20%), Positives = 159/413 (38%), Gaps = 36/413 (8%)
Query: 32 IVTSCYGPSGRLK-QLHNGFGGYVCTTSQSSALLSHLLVTHPILKILTASIQNHVSSFSD 90
+V S GP G K L +G + T+ + +L ++ V +P K+L + D
Sbjct: 38 LVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGD 97
Query: 91 CGLFTAILCCNLIENVQRL---GLTPTTVIRLNKHLLSLCISYLKSETCGCRIPVDFSST 147
+L L+ + L + P T+I + L S VD S
Sbjct: 98 GTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREALLSSA------VDHGSD 151
Query: 148 QI-----LLCLVRSILTSKPACMLTRKETEHVSALILRAFLLTIPENAEGHIILGKSLIV 202
++ L+ + + L+SK L +H + L + A L +G L I+
Sbjct: 152 EVKFRQDLMNIAGTTLSSK----LLTHHKDHFTKLAVEAVL-----RLKGSGNLEAIHII 202
Query: 203 PLKGQRVIDSTVLPGILIEMSEVQLMRLLPIKKSTALKVALFCTTLSGDTSDTGEGTVVV 262
G + DS + G L++ + + K+ K+ + T + D V V
Sbjct: 203 KKLGGSLADSYLDEGFLLDKK----IGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRV 258
Query: 263 SYGVS---LENAVLDQLLNLGRQLISDHVDLVLCQKVIHPSLKQFLNMHRIIAIDRIGVT 319
+E+A +++ +++ ++ + +++I+ +Q ++AI+
Sbjct: 259 DSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFA 318
Query: 320 LMEPLTKMTGTQPIGSLGSICPNSYGSVKDVCTAKFGSK---HFFHLIPNEATICSLLLC 376
+E L +TG + + GS K + G HF + EA C+++L
Sbjct: 319 GVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEA--CTIVLR 376
Query: 377 NRNDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCTETHLAAYIRHKTHNDP 429
DE + + AL VL T+K+ + GGGC+E +A + + P
Sbjct: 377 GATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLANRTP 429
>gi|48762932 chaperonin containing TCP1, subunit 8 (theta) [Homo
sapiens]
Length = 548
Score = 47.4 bits (111), Expect = 4e-05
Identities = 84/446 (18%), Positives = 168/446 (37%), Gaps = 35/446 (7%)
Query: 29 LKRIVTSCYGPSGRLKQLHNGFGGYVCTTSQSSALLSHLLVTHPILKILTASIQNHVSSF 88
L + + YGP+G K + N + T+ ++ +L L V HP K++ +
Sbjct: 39 LAQTTRTAYGPNGMNKMVINHLEK-LFVTNDAATILRELEVQHPAAKMIVMASHMQEQEV 97
Query: 89 SDCGLFTAILC---CNLIENVQRLGLTPTTVIRLNKHLLSLCISYLKSETCGCRIPVDFS 145
D F + L E + R+GL+ + VI + L + C C +
Sbjct: 98 GDGTNFVLVFAGALLELAEELLRIGLSVSEVIEGYEIACRKAHEILPNLVC-CSAK-NLR 155
Query: 146 STQILLCLVRSILTSKPACMLTRKETEHVSALILRAFLLTIPENAEGHIILGKSLIVPLK 205
+ L+R+ + SK ++ LI +A + P++ GH + + +
Sbjct: 156 DIDEVSSLLRTSIMSK-----QYGNEVFLAKLIAQACVSIFPDS--GHFNVDNIRVCKIL 208
Query: 206 GQRVIDSTVLPGILIEMSEVQLMRLLPIKKSTALKVALFCTTLSGDTSDTGEGTVVVSYG 265
G + S+VL G++ + + K+A++ G ++T +GTV++
Sbjct: 209 GSGISSSSVLHGMVFKKETEG-----DVTSVKDAKIAVYSCPFDGMITET-KGTVLIKTA 262
Query: 266 VSLENAVL--DQLLNLGRQLISD-HVDLVLCQKVIHPSLKQFLNMHRIIAIDRIGVTLME 322
L N + L++ + I+D ++V+ + + N + I+ + +
Sbjct: 263 EELMNFSKGEENLMDAQVKAIADTGANVVVTGGKVADMALHYANKYNIMLVRLNSKWDLR 322
Query: 323 PLTKMTGTQPIGSLGSICPNSYGSVKDVCTAKFGSKH--FFHLIPNEATICSLLLCNRND 380
L K G + L G V ++ G F + I +++L D
Sbjct: 323 RLCKTVGATALPRLTPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTD 382
Query: 381 TAWDELKLTCQTALHVLQLTLKEPWALLGGGCTETHLAAYIRHKTHNDPESILKDDECTQ 440
D+++ ++ ++ ++ + GGG TE LA I + C
Sbjct: 383 NLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITS----------YGETCPG 432
Query: 441 TELQLIAEAFCSALESVVGSLEHDGG 466
E Q + F A E++ +L + G
Sbjct: 433 LE-QYAIKKFAEAFEAIPRALAENSG 457
>gi|7657253 T-complex protein 1 [Homo sapiens]
Length = 557
Score = 40.8 bits (94), Expect = 0.003
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 26 LSVLKRIVTSCYGPSGRLKQLHNGFGGYVCTTSQSSALLSHLLVTHPILKILTASIQNHV 85
+ L ++ CYGP GR K L G VC T ++A+L L + HP +L + Q
Sbjct: 40 VQTLASVIRPCYGPHGRQKFLVTMKGETVC-TGCATAILRALELEHPAAWLLREAGQTQA 98
Query: 86 SSFSDCGLFTAILCCNLIENVQRL 109
+ D F +L L+E ++L
Sbjct: 99 ENSGDGTAFVVLLTEALLEQAEQL 122
>gi|5453607 chaperonin containing TCP1, subunit 7 isoform a [Homo
sapiens]
Length = 543
Score = 40.0 bits (92), Expect = 0.006
Identities = 84/449 (18%), Positives = 170/449 (37%), Gaps = 35/449 (7%)
Query: 28 VLKRIVTSCYGPSGRLKQLHNGFGGYVCTTSQSSALLSHLL-VTHPILKILTASIQNHVS 86
V+ V + GP G K + +G G T S A + LL V HP K L ++ +
Sbjct: 31 VIAEAVRTTLGPRGMDKLIVDGRGK--ATISNDGATILKLLDVVHPAAKTLVDIAKSQDA 88
Query: 87 SFSDCGLFTAILCCNLIENVQRL---GLTPTTVIRLNKHLLSLCISYLKSETCGCRIPVD 143
D +L ++ V+ GL P +IR + L ++ +K +
Sbjct: 89 EVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADK 148
Query: 144 FSSTQILLCLVRSILTSKPACMLTRKETEHVSALILRAFLLTIPENAEGHIILGKSLIVP 203
++L + L+SK L ++ + +++ A ++ + + L I
Sbjct: 149 VEQRKLLEKCAMTALSSK----LISQQKAFFAKMVVDAVMML-----DDLLQLKMIGIKK 199
Query: 204 LKGQRVIDSTVLPGILIEMSEVQLMRLLPIKKSTALKVALFCTTLSGDTSDTGEGTVVVS 263
++G + DS ++ G+ + + + KK K+AL L + + +
Sbjct: 200 VQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVEL--ELKAEKDNAEIRV 257
Query: 264 YGVSLENAVLDQLLNLG----RQLISDHVDLVLCQKVIHPSLKQFLNMHRIIAIDRIGVT 319
+ V A++D N+ ++ +VL + I Q+ + R+
Sbjct: 258 HTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEE 317
Query: 320 LMEPLTKMTGTQPIGSLGSICPNSYGSVKDVCTAKFGSK--HFFHLIPNEATICSLLLCN 377
++ G S+ ++ + G + + G + +FF P T C+ +L
Sbjct: 318 DLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPKAKT-CTFILRG 376
Query: 378 RNDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCTETHLAAYIRHKTHNDPESILKDDE 437
+ +E + + A+ +++ +K + GGG E L+ Y+R + P
Sbjct: 377 GAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIP-------- 428
Query: 438 CTQTELQLIAEAFCSALESVVGSLEHDGG 466
+ QL+ A+ ALE + L + G
Sbjct: 429 ---GKQQLLIGAYAKALEIIPRQLCDNAG 454
>gi|57863257 T-complex protein 1 isoform a [Homo sapiens]
Length = 556
Score = 39.7 bits (91), Expect = 0.008
Identities = 82/430 (19%), Positives = 162/430 (37%), Gaps = 40/430 (9%)
Query: 15 EPLTTERVRTTLSVLKRIVTSCYGPSGRLKQLHNGFGGYVCTTSQSSALLSHLLVTHPIL 74
E + ++ V S+ IV S GP G K L + G V T+ + +L L V HP
Sbjct: 15 ETIRSQNVMAAASIAN-IVKSSLGPVGLDKMLVDDIGD-VTITNDGATILKLLEVEHPAA 72
Query: 75 KILTASIQNHVSSFSDCGLFTAILCCNLIENVQRL---GLTPTTVIRLNKHLLSLCISYL 131
K+L D I+ L++N L + PT+VI + + Y+
Sbjct: 73 KVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYI 132
Query: 132 KSETCGCRIPVDFSSTQILLCLVRSILTSKPACMLTRKETEHVSALILRAFLLTIPENAE 191
+ D L+ ++ ++SK + + + +++ A L +
Sbjct: 133 NENLI---VNTDELGRDCLINAAKTSMSSK----IIGINGDFFANMVVDAVLAIKYTDIR 185
Query: 192 G--HIILGKSLIVPLKGQRVIDSTVLPGILIEMSEVQLMRLLPIKKSTALKVALFCTTLS 249
G + I+ G+ ++S ++ G + V + +P K+ K+A +L
Sbjct: 186 GQPRYPVNSVNILKAHGRSQMESMLISGYALNC--VVGSQGMP-KRIVNAKIACLDFSLQ 242
Query: 250 GDTSDTGEGTVVVSYGVSLENAVLDQLLNLGRQLISDHVDLVLCQ---------KVIHPS 300
G V+ + LDQ+ + + + +L +
Sbjct: 243 KTKMKLGVQVVIT------DPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMC 296
Query: 301 LKQFLNMHRIIAIDRIGVTLMEPLTKMTGTQPIGSLGSICPNS------YGSVKDVCTAK 354
LK F+ +A+ R+ ++ + K +G + +L ++ G ++V +
Sbjct: 297 LKYFVEA-GAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQER 355
Query: 355 FGSKHFFHLIPNEA-TICSLLLCNRNDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCT 413
+ +A T S++L ND DE++ + AL V++ L+ + GGG
Sbjct: 356 ICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAV 415
Query: 414 ETHLAAYIRH 423
E L+ Y+ +
Sbjct: 416 EAALSIYLEN 425
>gi|100816407 Bardet-Biedl syndrome 10 [Homo sapiens]
Length = 723
Score = 38.5 bits (88), Expect = 0.017
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 28 VLKRIVTSCYGPSGRLKQLHNGFGGYVCTTSQSSALLSHLLVTHPILKILTASIQNHVSS 87
VL+ IV+ C GP GR + L G V + LL L + HPI +++ + +H+
Sbjct: 20 VLEAIVSCCVGPEGR-QVLCTKPTGEVLLSRNGGRLLEALHLEHPIARMIVDCVSSHLKK 78
Query: 88 FSDCGLFTAILCCNLIENVQRL 109
D I C+L+ + +
Sbjct: 79 TGDGAKTFIIFLCHLLRGLHAI 100
>gi|58331185 chaperonin containing TCP1, subunit 7 isoform b [Homo
sapiens]
Length = 339
Score = 32.7 bits (73), Expect = 0.92
Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 11/111 (9%)
Query: 356 GSKHFFHLIPNEATICSLLLCNRNDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCTET 415
G ++ F +A C+ +L + +E + + A+ +++ +K + GGG E
Sbjct: 151 GERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEM 210
Query: 416 HLAAYIRHKTHNDPESILKDDECTQTELQLIAEAFCSALESVVGSLEHDGG 466
L+ Y+R + P + QL+ A+ ALE + L + G
Sbjct: 211 ELSKYLRDYSRTIP-----------GKQQLLIGAYAKALEIIPRQLCDNAG 250
>gi|57863259 T-complex protein 1 isoform b [Homo sapiens]
Length = 401
Score = 32.3 bits (72), Expect = 1.2
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 369 TICSLLLCNRNDTAWDELKLTCQTALHVLQLTLKEPWALLGGGCTETHLAAYIRH 423
T S++L ND DE++ + AL V++ L+ + GGG E L+ Y+ +
Sbjct: 216 TSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLEN 270
>gi|225690529 golgin, RAB6-interacting isoform a [Homo sapiens]
Length = 394
Score = 30.0 bits (66), Expect = 6.0
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 12/55 (21%)
Query: 473 KYGHLWSVQADSPCVANWPDLLSQCGCGLYNSQEELNWSFLRSTRRPFVPQSCLP 527
++GH W + WP ++Q G S+EEL L+ T+ PF PQ LP
Sbjct: 13 RFGHFWGCR--------WPGPMAQGWAGF--SEEELR--RLKQTKDPFEPQRRLP 55
>gi|225690532 golgin, RAB6-interacting isoform b [Homo sapiens]
Length = 246
Score = 30.0 bits (66), Expect = 6.0
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 12/55 (21%)
Query: 473 KYGHLWSVQADSPCVANWPDLLSQCGCGLYNSQEELNWSFLRSTRRPFVPQSCLP 527
++GH W + WP ++Q G S+EEL L+ T+ PF PQ LP
Sbjct: 13 RFGHFWGCR--------WPGPMAQGWAGF--SEEELR--RLKQTKDPFEPQRRLP 55
>gi|52627141 olfactory receptor, family 9, subfamily Q, member 2
[Homo sapiens]
Length = 314
Score = 30.0 bits (66), Expect = 6.0
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 351 CTAKFGSKHFFHLIPNEATICSLLLCNRNDTAWDELKLTCQTALHVLQLTLKEPWALLGG 410
C A+F FF I C LL A+D CQ L+V +T K W L+ G
Sbjct: 97 CAAQFFLFTFFASID-----CYLLAI----MAYDRYTAVCQPLLYVTIITEKARWGLVTG 147
Query: 411 GCTETHLAAYIRHKT 425
+A++R T
Sbjct: 148 AYVAGFFSAFVRTVT 162
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 29.6 bits (65), Expect = 7.8
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 424 KTHNDPESILKDDECTQTELQLIAEAFCSALESVVGSLEHDGGEIL 469
KT ++ E + K E + ELQ SALE SLEH+ G+IL
Sbjct: 1521 KTIHELEKVRKQLEAEKMELQ-------SALEEAEASLEHEEGKIL 1559
>gi|239746217 PREDICTED: zinc finger protein 66 [Homo sapiens]
Length = 1114
Score = 29.6 bits (65), Expect = 7.8
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 69 VTHPILKILTASIQNHVSSFSDCGLFTAILCCNLIENVQRLGLTPTTVIRLNKHLLSLCI 128
VT I+ + S+ H F+ FTA++ C+L + T+I + + L++ +
Sbjct: 1007 VTQSIITLRICSLGKH---FNATHSFTAVVICSLSATQSSEPVYRQTLILNSGYKLTVTL 1063
Query: 129 SYLKSETCGCRIPVDFSSTQILLCLVRSILTSKP 162
S++ E C + S L L S++T +P
Sbjct: 1064 SFITWEPVHCHPHIHHSGN--LFTLTNSLITWEP 1095
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,936,863
Number of Sequences: 37866
Number of extensions: 914403
Number of successful extensions: 2088
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2065
Number of HSP's gapped (non-prelim): 26
length of query: 570
length of database: 18,247,518
effective HSP length: 108
effective length of query: 462
effective length of database: 14,157,990
effective search space: 6540991380
effective search space used: 6540991380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.