Search of human proteins with 8923528

Search of human proteins with 8923528

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8923528 hypothetical protein LOC54980 [Homo sapiens]
         (574 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8923528 hypothetical protein LOC54980 [Homo sapiens]              1156   0.0  
gi|38569421 ATP citrate lyase isoform 1 [Homo sapiens]                 32   1.2  
gi|169204941 PREDICTED: similar to Nucleolar protein 5A [Homo sa...    32   2.1  
gi|169205573 PREDICTED: similar to Nucleolar protein 5A [Homo sa...    32   2.1  
gi|169203848 PREDICTED: hypothetical protein [Homo sapiens]            32   2.1  
gi|31542634 filamin A interacting protein 1 [Homo sapiens]             32   2.1  
gi|81158226 neuronal cell adhesion molecule isoform A precursor ...    31   2.7  
gi|81158224 neuronal cell adhesion molecule isoform B precursor ...    31   2.7  
gi|110349721 titin isoform novex-3 [Homo sapiens]                      30   4.6  
gi|157388904 HEAT repeat containing 2 [Homo sapiens]                   30   4.6  
gi|239735490 v-myb myeloblastosis viral oncogene homolog isoform...    30   6.0  
gi|83281200 protogenin [Homo sapiens]                                  30   7.9  

>gi|8923528 hypothetical protein LOC54980 [Homo sapiens]
          Length = 574

 Score = 1156 bits (2990), Expect = 0.0
 Identities = 574/574 (100%), Positives = 574/574 (100%)

Query: 1   MEPNSLRTKVPAFLSDLGKATLRGIRKCPRCGTYNGTRGLSCKNKTCGTIFRYGARKQPS 60
           MEPNSLRTKVPAFLSDLGKATLRGIRKCPRCGTYNGTRGLSCKNKTCGTIFRYGARKQPS
Sbjct: 1   MEPNSLRTKVPAFLSDLGKATLRGIRKCPRCGTYNGTRGLSCKNKTCGTIFRYGARKQPS 60

Query: 61  VEAVKIITGSDLQVYSVRQRDRGPDYRCFVELGVSETTIQTVDGTIITQLSSGRCYVPSC 120
           VEAVKIITGSDLQVYSVRQRDRGPDYRCFVELGVSETTIQTVDGTIITQLSSGRCYVPSC
Sbjct: 61  VEAVKIITGSDLQVYSVRQRDRGPDYRCFVELGVSETTIQTVDGTIITQLSSGRCYVPSC 120

Query: 121 LKAATQGVVENQCQHIKLAVNCQAEATPLTLKSSVLNAMQASPETKQTIWQLATEPTGPL 180
           LKAATQGVVENQCQHIKLAVNCQAEATPLTLKSSVLNAMQASPETKQTIWQLATEPTGPL
Sbjct: 121 LKAATQGVVENQCQHIKLAVNCQAEATPLTLKSSVLNAMQASPETKQTIWQLATEPTGPL 180

Query: 181 VQRITKNILVVKCKASQKHSLGYLHTSFVQKVSGKSLPERRFFCSCQTLKSHKSNASKDE 240
           VQRITKNILVVKCKASQKHSLGYLHTSFVQKVSGKSLPERRFFCSCQTLKSHKSNASKDE
Sbjct: 181 VQRITKNILVVKCKASQKHSLGYLHTSFVQKVSGKSLPERRFFCSCQTLKSHKSNASKDE 240

Query: 241 TAQRCIHFFACICAFASDETLAQEFSDFLNFDSSGLKEIIVPQLGCHSESTVSACESTAS 300
           TAQRCIHFFACICAFASDETLAQEFSDFLNFDSSGLKEIIVPQLGCHSESTVSACESTAS
Sbjct: 241 TAQRCIHFFACICAFASDETLAQEFSDFLNFDSSGLKEIIVPQLGCHSESTVSACESTAS 300

Query: 301 KSKKRRKDEVSGAQMNSSLLPQDAVSSNLRKSGLKKPVVASSLKRQACGQLLDEAQVTLS 360
           KSKKRRKDEVSGAQMNSSLLPQDAVSSNLRKSGLKKPVVASSLKRQACGQLLDEAQVTLS
Sbjct: 301 KSKKRRKDEVSGAQMNSSLLPQDAVSSNLRKSGLKKPVVASSLKRQACGQLLDEAQVTLS 360

Query: 361 FQDWLASVTERIHQTMHYQFDGKPEPLVFHIPQSFFDALQQRISIGSAKKRLPNSTTAFV 420
           FQDWLASVTERIHQTMHYQFDGKPEPLVFHIPQSFFDALQQRISIGSAKKRLPNSTTAFV
Sbjct: 361 FQDWLASVTERIHQTMHYQFDGKPEPLVFHIPQSFFDALQQRISIGSAKKRLPNSTTAFV 420

Query: 421 RKDALPLGTFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYELFKCPKVEVES 480
           RKDALPLGTFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYELFKCPKVEVES
Sbjct: 421 RKDALPLGTFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYELFKCPKVEVES 480

Query: 481 IAETYGRIEKQPVLRPLELKTFLKVGNTSPDQKEPTPFIIEWIPDILPQSKIGELRIKFE 540
           IAETYGRIEKQPVLRPLELKTFLKVGNTSPDQKEPTPFIIEWIPDILPQSKIGELRIKFE
Sbjct: 481 IAETYGRIEKQPVLRPLELKTFLKVGNTSPDQKEPTPFIIEWIPDILPQSKIGELRIKFE 540

Query: 541 YGHHRNGHVAEYQDQRPPLDQPLELAPLTTITFP 574
           YGHHRNGHVAEYQDQRPPLDQPLELAPLTTITFP
Sbjct: 541 YGHHRNGHVAEYQDQRPPLDQPLELAPLTTITFP 574


>gi|38569421 ATP citrate lyase isoform 1 [Homo sapiens]
          Length = 1101

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 1/95 (1%)

Query: 288 SESTVSACESTASKSKKRRKDEVSGAQMNSSLLPQDAVSSNLRKSGLKKPVVASSLKRQA 347
           S ST +   S  +   + R DEV+ A+     +PQD+V S     G    + +   K   
Sbjct: 442 SGSTSTPAPSRTASFSESRADEVAPAKKAKPAMPQDSVPSPRSLQGKSTTLFSRHTKAIV 501

Query: 348 CGQLLDEAQVTLSFQDWLASVTERIHQTMHYQFDG 382
            G      Q  L F D++ S  E     M Y F G
Sbjct: 502 WGMQTRAVQGMLDF-DYVCSRDEPSVAAMVYPFTG 535


>gi|169204941 PREDICTED: similar to Nucleolar protein 5A [Homo
           sapiens]
          Length = 166

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 19/76 (25%), Positives = 31/76 (40%)

Query: 274 SGLKEIIVPQLGCHSESTVSACESTASKSKKRRKDEVSGAQMNSSLLPQDAVSSNLRKSG 333
           + +  +  PQ    S ST   CE T+ K KK++K +        +  P  + S   +K  
Sbjct: 24  TNVHNVFGPQNHPDSSSTPERCEETSEKPKKKKKQKPQEVPQEKTEDPSISFSKPKKKKS 83

Query: 334 LKKPVVASSLKRQACG 349
             K  + SS   +  G
Sbjct: 84  FSKEELMSSDLEETAG 99


>gi|169205573 PREDICTED: similar to Nucleolar protein 5A [Homo
           sapiens]
          Length = 166

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 19/76 (25%), Positives = 31/76 (40%)

Query: 274 SGLKEIIVPQLGCHSESTVSACESTASKSKKRRKDEVSGAQMNSSLLPQDAVSSNLRKSG 333
           + +  +  PQ    S ST   CE T+ K KK++K +        +  P  + S   +K  
Sbjct: 24  TNVHNVFGPQNHPDSSSTPERCEETSEKPKKKKKQKPQEVPQEKTEDPSISFSKPKKKKS 83

Query: 334 LKKPVVASSLKRQACG 349
             K  + SS   +  G
Sbjct: 84  FSKEELMSSDLEETAG 99


>gi|169203848 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 166

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 19/76 (25%), Positives = 31/76 (40%)

Query: 274 SGLKEIIVPQLGCHSESTVSACESTASKSKKRRKDEVSGAQMNSSLLPQDAVSSNLRKSG 333
           + +  +  PQ    S ST   CE T+ K KK++K +        +  P  + S   +K  
Sbjct: 24  TNVHNVFGPQNHPDSSSTPERCEETSEKPKKKKKQKPQEVPQEKTEDPSISFSKPKKKKS 83

Query: 334 LKKPVVASSLKRQACG 349
             K  + SS   +  G
Sbjct: 84  FSKEELMSSDLEETAG 99


>gi|31542634 filamin A interacting protein 1 [Homo sapiens]
          Length = 1213

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 8/83 (9%)

Query: 261 LAQEFSDFLNFDSSGLKEIIVPQLGCHSESTVSACESTASKSKKRRKDEVSGAQMNSSLL 320
           L++ +S  L    +G + + VP          S    T + S +  ++E     +  S  
Sbjct: 778 LSKRYSRALRPSVNGRRMVDVP--------VTSTGVQTDAVSGEAAEEETPAVFIRKSFQ 829

Query: 321 PQDAVSSNLRKSGLKKPVVASSL 343
            ++ + SNLR+ GLKKPV  SS+
Sbjct: 830 EENHIMSNLRQVGLKKPVERSSV 852


>gi|81158226 neuronal cell adhesion molecule isoform A precursor [Homo
            sapiens]
          Length = 1304

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 506  GNTSPDQKEPTPFIIEWIPDILP--QSKIGELRIKFEYGHHRNGHVAEYQDQRPPLDQPL 563
            G  SPD+   TP  +   P  L      +  L ++++   H NG + EY  +  P++   
Sbjct: 937  GPASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTH 996

Query: 564  ELAPLTTITFP 574
            EL PL  +  P
Sbjct: 997  ELGPLVDLKIP 1007


>gi|81158224 neuronal cell adhesion molecule isoform B precursor
           [Homo sapiens]
          Length = 1183

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 506 GNTSPDQKEPTPFIIEWIPDILP--QSKIGELRIKFEYGHHRNGHVAEYQDQRPPLDQPL 563
           G  SPD+   TP  +   P  L      +  L ++++   H NG + EY  +  P++   
Sbjct: 921 GPASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTH 980

Query: 564 ELAPLTTITFP 574
           EL PL  +  P
Sbjct: 981 ELGPLVDLKIP 991


>gi|110349721 titin isoform novex-3 [Homo sapiens]
          Length = 5604

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 30/135 (22%), Positives = 50/135 (37%), Gaps = 11/135 (8%)

Query: 429  TFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYELFKCPKVEVESIAETYGRI 488
            T  + + +ITN+ + +++ +TPE   +          GT        V VE   E     
Sbjct: 3847 TIGESSTYITNVCEKEEVYETPENVSQAITPHASESFGTL-------VNVEESEEIASER 3899

Query: 489  EKQPVLRPLELKTFLKVGNTSPDQKEPTPFIIE----WIPDILPQSKIGELRIKFEYGHH 544
             K+  LR L+L    ++     +QKE      E      P   P S + E+  +  Y   
Sbjct: 3900 IKKDDLRELQLSASTRIDEFKTEQKEENMRFFENSFRKRPQRCPPSFLQEIESQEVYEGD 3959

Query: 545  RNGHVAEYQDQRPPL 559
                V  +Q    P+
Sbjct: 3960 SCNFVCHFQGYPQPI 3974


>gi|157388904 HEAT repeat containing 2 [Homo sapiens]
          Length = 855

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 40/173 (23%), Positives = 68/173 (39%), Gaps = 8/173 (4%)

Query: 127 GVVENQCQHIKLAVNCQAEATPLTLKSSVLNAMQASPETKQTIWQLATEPTGPLVQRITK 186
           GV   Q   + L +   A AT L  K+       A  E   +   L  +  GPL++R+T 
Sbjct: 513 GVASLQLLDVLLTIVALAGATGLRDKAQETMDSLAMVEGVSSCQDLYRKHIGPLLERVTA 572

Query: 187 NILVVKCKASQKHSLGYLHTSFVQKVSGKSLPERRFFCSCQTLKSHKSNASKDETAQRCI 246
           + L         HS   L  S +   SG +L E        TL++    +   +   +  
Sbjct: 573 SHL-----DWTAHSPELLQFSVIVAQSGPALGEALPHV-VPTLRACLQPSQDPQMRLKLF 626

Query: 247 HFFACICAFASDETLAQEFSDFLNFDSSGLKEIIVPQLGCHSESTVSACESTA 299
              + +   A+D   +Q    F ++  +  K+I+ P L  H+  T +A  + A
Sbjct: 627 SILSTVLLRATDTINSQ--GQFPSYLETVTKDILAPNLQWHAGRTAAAIRTAA 677


>gi|239735490 v-myb myeloblastosis viral oncogene homolog isoform 5
           [Homo sapiens]
          Length = 555

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 59/274 (21%), Positives = 110/274 (40%), Gaps = 39/274 (14%)

Query: 302 SKKRRKDEVSGAQMNSSLLPQDAVSSNLRKSGLKKPVVASSLKRQACGQLLDEAQVTLSF 361
           S  RRK E  G    SS   Q AV+++ +K+      +    +     QL    Q T++ 
Sbjct: 187 STMRRKVEQEGYLQESSKASQPAVATSFQKNSH----LMGFAQAPPTAQLPATGQPTVNN 242

Query: 362 QDWLASVTERIHQTMHYQFDGKPEPLVFHIPQSFFDALQQRISIGSAKKR---------L 412
                 ++E  + + H  +       + ++PQ    A+Q+  +    +K          L
Sbjct: 243 DYSYYHISEAQNVSSHVPYPVALHVNIVNVPQPAAAAIQRHYNDEDPEKEKRIKELELLL 302

Query: 413 PNSTTAFVRKDALP-LGTFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYE-- 469
            ++      +  LP L T S    H  + L++  +  TP +  ++T +   +RD T +  
Sbjct: 303 MSTENELKGQQVLPFLNTSSN---HENSDLEMPSLTSTPLIGHKLTVTTPFHRDQTVKTQ 359

Query: 470 ----LFKCPKVEVESIAETYGRIEKQPVLRPLELKTFLKVGNTSPDQKEPTPFIIEWIPD 525
               +F+ P ++  SI E+  R    P    L  +  +K G      + P+  ++E + D
Sbjct: 360 KENTVFRTPAIK-RSILESSPRTPT-PFKHALAAQE-IKYGPLKMLPQTPS-HLVEDLQD 415

Query: 526 ILPQSKIGELRIKFEYGHHRNGHVAEYQDQRPPL 559
           ++ Q                +G VAE+Q+  PPL
Sbjct: 416 VIKQES------------DESGIVAEFQENGPPL 437


>gi|83281200 protogenin [Homo sapiens]
          Length = 1150

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 4/77 (5%)

Query: 72  LQVYSVRQRDRGPDYRCFVELGVSETTIQTVDGTIITQLSSGRCYVPSCLKAATQGVVEN 131
           LQ+Y V QRD G +YRC                T+I    S   + P+ + A  Q +  +
Sbjct: 190 LQIYDVSQRDSG-NYRCIAATVAHRRKSMEASLTVIPAKESKSFHTPTII-AGPQNITTS 247

Query: 132 QCQHIKLAVNCQAEATP 148
              H  + + C A   P
Sbjct: 248 --LHQTVVLECMATGNP 262


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.132    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,640,416
Number of Sequences: 37866
Number of extensions: 946506
Number of successful extensions: 2360
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2350
Number of HSP's gapped (non-prelim): 17
length of query: 574
length of database: 18,247,518
effective HSP length: 108
effective length of query: 466
effective length of database: 14,157,990
effective search space: 6597623340
effective search space used: 6597623340
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.