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Search of human proteins with 89052437
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89052437 PREDICTED: chromosome 19 open reading frame 67
[Homo sapiens]
(368 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169213751 PREDICTED: chromosome 19 open reading frame 67 [Hom... 766 0.0
gi|89057223 PREDICTED: chromosome 19 open reading frame 67 [Homo... 766 0.0
gi|89052437 PREDICTED: chromosome 19 open reading frame 67 [Homo... 766 0.0
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 50 4e-06
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 50 4e-06
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 50 4e-06
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 50 4e-06
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 50 4e-06
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 50 4e-06
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 50 4e-06
gi|7706501 WW domain binding protein 11 [Homo sapiens] 46 6e-05
gi|157785645 SPEG complex locus [Homo sapiens] 43 4e-04
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 43 4e-04
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 43 5e-04
gi|150170670 piccolo isoform 2 [Homo sapiens] 42 9e-04
gi|150378539 piccolo isoform 1 [Homo sapiens] 42 9e-04
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 41 0.001
gi|33356148 formin-like 1 [Homo sapiens] 41 0.001
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 40 0.003
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 40 0.003
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 40 0.003
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 40 0.003
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 40 0.003
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 40 0.003
gi|156416026 zinc finger protein 219 [Homo sapiens] 40 0.003
gi|156415998 zinc finger protein 219 [Homo sapiens] 40 0.003
gi|156415996 zinc finger protein 219 [Homo sapiens] 40 0.003
gi|110815800 WD repeat domain 32 [Homo sapiens] 40 0.003
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 40 0.004
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] 39 0.006
>gi|169213751 PREDICTED: chromosome 19 open reading frame 67 [Homo
sapiens]
Length = 368
Score = 766 bits (1979), Expect = 0.0
Identities = 368/368 (100%), Positives = 368/368 (100%)
Query: 1 MATEQWFEGSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAE 60
MATEQWFEGSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAE
Sbjct: 1 MATEQWFEGSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAE 60
Query: 61 ARASTSSPKPLVPRPGPAPPRLSLDTLFSPITQQLRYLLKKADDFQSYLLYSRDQVQKEQ 120
ARASTSSPKPLVPRPGPAPPRLSLDTLFSPITQQLRYLLKKADDFQSYLLYSRDQVQKEQ
Sbjct: 61 ARASTSSPKPLVPRPGPAPPRLSLDTLFSPITQQLRYLLKKADDFQSYLLYSRDQVQKEQ 120
Query: 121 LAKAMPTFLQMCEPYFLYLEAAARSIPPIYGPLQELVRKGLLEISQQLTLRLEQLVLMYA 180
LAKAMPTFLQMCEPYFLYLEAAARSIPPIYGPLQELVRKGLLEISQQLTLRLEQLVLMYA
Sbjct: 121 LAKAMPTFLQMCEPYFLYLEAAARSIPPIYGPLQELVRKGLLEISQQLTLRLEQLVLMYA 180
Query: 181 SFGFVDLEEMNPLSISCFFCGRFSISLSHEVSIFRYCAPTAYTASRFPRYLYKKMRWHLE 240
SFGFVDLEEMNPLSISCFFCGRFSISLSHEVSIFRYCAPTAYTASRFPRYLYKKMRWHLE
Sbjct: 181 SFGFVDLEEMNPLSISCFFCGRFSISLSHEVSIFRYCAPTAYTASRFPRYLYKKMRWHLE 240
Query: 241 ATPEAPGRGQDSLVDYYFLCYRDTWEDTGQSPANSCPQIQKLWSIGRWVPLGPAEDDLYS 300
ATPEAPGRGQDSLVDYYFLCYRDTWEDTGQSPANSCPQIQKLWSIGRWVPLGPAEDDLYS
Sbjct: 241 ATPEAPGRGQDSLVDYYFLCYRDTWEDTGQSPANSCPQIQKLWSIGRWVPLGPAEDDLYS 300
Query: 301 WILCPQPLGDYQQLLTIGFEEPTPTLATDLLVQILTGQLLGLGGRTGRRLSWGIRGADKV 360
WILCPQPLGDYQQLLTIGFEEPTPTLATDLLVQILTGQLLGLGGRTGRRLSWGIRGADKV
Sbjct: 301 WILCPQPLGDYQQLLTIGFEEPTPTLATDLLVQILTGQLLGLGGRTGRRLSWGIRGADKV 360
Query: 361 GEPYGIQA 368
GEPYGIQA
Sbjct: 361 GEPYGIQA 368
>gi|89057223 PREDICTED: chromosome 19 open reading frame 67 [Homo
sapiens]
Length = 368
Score = 766 bits (1979), Expect = 0.0
Identities = 368/368 (100%), Positives = 368/368 (100%)
Query: 1 MATEQWFEGSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAE 60
MATEQWFEGSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAE
Sbjct: 1 MATEQWFEGSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAE 60
Query: 61 ARASTSSPKPLVPRPGPAPPRLSLDTLFSPITQQLRYLLKKADDFQSYLLYSRDQVQKEQ 120
ARASTSSPKPLVPRPGPAPPRLSLDTLFSPITQQLRYLLKKADDFQSYLLYSRDQVQKEQ
Sbjct: 61 ARASTSSPKPLVPRPGPAPPRLSLDTLFSPITQQLRYLLKKADDFQSYLLYSRDQVQKEQ 120
Query: 121 LAKAMPTFLQMCEPYFLYLEAAARSIPPIYGPLQELVRKGLLEISQQLTLRLEQLVLMYA 180
LAKAMPTFLQMCEPYFLYLEAAARSIPPIYGPLQELVRKGLLEISQQLTLRLEQLVLMYA
Sbjct: 121 LAKAMPTFLQMCEPYFLYLEAAARSIPPIYGPLQELVRKGLLEISQQLTLRLEQLVLMYA 180
Query: 181 SFGFVDLEEMNPLSISCFFCGRFSISLSHEVSIFRYCAPTAYTASRFPRYLYKKMRWHLE 240
SFGFVDLEEMNPLSISCFFCGRFSISLSHEVSIFRYCAPTAYTASRFPRYLYKKMRWHLE
Sbjct: 181 SFGFVDLEEMNPLSISCFFCGRFSISLSHEVSIFRYCAPTAYTASRFPRYLYKKMRWHLE 240
Query: 241 ATPEAPGRGQDSLVDYYFLCYRDTWEDTGQSPANSCPQIQKLWSIGRWVPLGPAEDDLYS 300
ATPEAPGRGQDSLVDYYFLCYRDTWEDTGQSPANSCPQIQKLWSIGRWVPLGPAEDDLYS
Sbjct: 241 ATPEAPGRGQDSLVDYYFLCYRDTWEDTGQSPANSCPQIQKLWSIGRWVPLGPAEDDLYS 300
Query: 301 WILCPQPLGDYQQLLTIGFEEPTPTLATDLLVQILTGQLLGLGGRTGRRLSWGIRGADKV 360
WILCPQPLGDYQQLLTIGFEEPTPTLATDLLVQILTGQLLGLGGRTGRRLSWGIRGADKV
Sbjct: 301 WILCPQPLGDYQQLLTIGFEEPTPTLATDLLVQILTGQLLGLGGRTGRRLSWGIRGADKV 360
Query: 361 GEPYGIQA 368
GEPYGIQA
Sbjct: 361 GEPYGIQA 368
>gi|89052437 PREDICTED: chromosome 19 open reading frame 67 [Homo
sapiens]
Length = 368
Score = 766 bits (1979), Expect = 0.0
Identities = 368/368 (100%), Positives = 368/368 (100%)
Query: 1 MATEQWFEGSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAE 60
MATEQWFEGSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAE
Sbjct: 1 MATEQWFEGSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAE 60
Query: 61 ARASTSSPKPLVPRPGPAPPRLSLDTLFSPITQQLRYLLKKADDFQSYLLYSRDQVQKEQ 120
ARASTSSPKPLVPRPGPAPPRLSLDTLFSPITQQLRYLLKKADDFQSYLLYSRDQVQKEQ
Sbjct: 61 ARASTSSPKPLVPRPGPAPPRLSLDTLFSPITQQLRYLLKKADDFQSYLLYSRDQVQKEQ 120
Query: 121 LAKAMPTFLQMCEPYFLYLEAAARSIPPIYGPLQELVRKGLLEISQQLTLRLEQLVLMYA 180
LAKAMPTFLQMCEPYFLYLEAAARSIPPIYGPLQELVRKGLLEISQQLTLRLEQLVLMYA
Sbjct: 121 LAKAMPTFLQMCEPYFLYLEAAARSIPPIYGPLQELVRKGLLEISQQLTLRLEQLVLMYA 180
Query: 181 SFGFVDLEEMNPLSISCFFCGRFSISLSHEVSIFRYCAPTAYTASRFPRYLYKKMRWHLE 240
SFGFVDLEEMNPLSISCFFCGRFSISLSHEVSIFRYCAPTAYTASRFPRYLYKKMRWHLE
Sbjct: 181 SFGFVDLEEMNPLSISCFFCGRFSISLSHEVSIFRYCAPTAYTASRFPRYLYKKMRWHLE 240
Query: 241 ATPEAPGRGQDSLVDYYFLCYRDTWEDTGQSPANSCPQIQKLWSIGRWVPLGPAEDDLYS 300
ATPEAPGRGQDSLVDYYFLCYRDTWEDTGQSPANSCPQIQKLWSIGRWVPLGPAEDDLYS
Sbjct: 241 ATPEAPGRGQDSLVDYYFLCYRDTWEDTGQSPANSCPQIQKLWSIGRWVPLGPAEDDLYS 300
Query: 301 WILCPQPLGDYQQLLTIGFEEPTPTLATDLLVQILTGQLLGLGGRTGRRLSWGIRGADKV 360
WILCPQPLGDYQQLLTIGFEEPTPTLATDLLVQILTGQLLGLGGRTGRRLSWGIRGADKV
Sbjct: 301 WILCPQPLGDYQQLLTIGFEEPTPTLATDLLVQILTGQLLGLGGRTGRRLSWGIRGADKV 360
Query: 361 GEPYGIQA 368
GEPYGIQA
Sbjct: 361 GEPYGIQA 368
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 49.7 bits (117), Expect = 4e-06
Identities = 33/78 (42%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 9 GSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPED-AEGRLAEARASTSS 67
G P P + P P PP G PS PPG PG P P+ EG +A A A TS+
Sbjct: 241 GPGPAPPNYSRPHGMGGPNMPPPG-PS-GVPPGMPGQPPGGPPKPWPEGPMANAAAPTST 298
Query: 68 PKPLVP-----RPGPAPP 80
P+ L+P RP PAPP
Sbjct: 299 PQKLIPPQPTGRPSPAPP 316
Score = 28.9 bits (63), Expect = 7.7
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 13 LDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDP 51
+ P T P P PP P PG P++P P
Sbjct: 303 IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAP 341
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 49.7 bits (117), Expect = 4e-06
Identities = 33/78 (42%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 9 GSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPED-AEGRLAEARASTSS 67
G P P + P P PP G PS PPG PG P P+ EG +A A A TS+
Sbjct: 241 GPGPAPPNYSRPHGMGGPNMPPPG-PS-GVPPGMPGQPPGGPPKPWPEGPMANAAAPTST 298
Query: 68 PKPLVP-----RPGPAPP 80
P+ L+P RP PAPP
Sbjct: 299 PQKLIPPQPTGRPSPAPP 316
Score = 28.9 bits (63), Expect = 7.7
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 13 LDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDP 51
+ P T P P PP P PG P++P P
Sbjct: 303 IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAP 341
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 49.7 bits (117), Expect = 4e-06
Identities = 33/78 (42%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 9 GSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPED-AEGRLAEARASTSS 67
G P P + P P PP G PS PPG PG P P+ EG +A A A TS+
Sbjct: 241 GPGPAPPNYSRPHGMGGPNMPPPG-PS-GVPPGMPGQPPGGPPKPWPEGPMANAAAPTST 298
Query: 68 PKPLVP-----RPGPAPP 80
P+ L+P RP PAPP
Sbjct: 299 PQKLIPPQPTGRPSPAPP 316
Score = 28.9 bits (63), Expect = 7.7
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 13 LDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDP 51
+ P T P P PP P PG P++P P
Sbjct: 303 IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAP 341
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 49.7 bits (117), Expect = 4e-06
Identities = 33/78 (42%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 9 GSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPED-AEGRLAEARASTSS 67
G P P + P P PP G PS PPG PG P P+ EG +A A A TS+
Sbjct: 241 GPGPAPPNYSRPHGMGGPNMPPPG-PS-GVPPGMPGQPPGGPPKPWPEGPMANAAAPTST 298
Query: 68 PKPLVP-----RPGPAPP 80
P+ L+P RP PAPP
Sbjct: 299 PQKLIPPQPTGRPSPAPP 316
Score = 28.9 bits (63), Expect = 7.7
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 13 LDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDP 51
+ P T P P PP P PG P++P P
Sbjct: 303 IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAP 341
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 49.7 bits (117), Expect = 4e-06
Identities = 33/78 (42%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 9 GSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPED-AEGRLAEARASTSS 67
G P P + P P PP G PS PPG PG P P+ EG +A A A TS+
Sbjct: 241 GPGPAPPNYSRPHGMGGPNMPPPG-PS-GVPPGMPGQPPGGPPKPWPEGPMANAAAPTST 298
Query: 68 PKPLVP-----RPGPAPP 80
P+ L+P RP PAPP
Sbjct: 299 PQKLIPPQPTGRPSPAPP 316
Score = 28.9 bits (63), Expect = 7.7
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 13 LDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDP 51
+ P T P P PP P PG P++P P
Sbjct: 303 IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAP 341
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 49.7 bits (117), Expect = 4e-06
Identities = 33/78 (42%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 9 GSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPED-AEGRLAEARASTSS 67
G P P + P P PP G PS PPG PG P P+ EG +A A A TS+
Sbjct: 241 GPGPAPPNYSRPHGMGGPNMPPPG-PS-GVPPGMPGQPPGGPPKPWPEGPMANAAAPTST 298
Query: 68 PKPLVP-----RPGPAPP 80
P+ L+P RP PAPP
Sbjct: 299 PQKLIPPQPTGRPSPAPP 316
Score = 28.9 bits (63), Expect = 7.7
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 13 LDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDP 51
+ P T P P PP P PG P++P P
Sbjct: 303 IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAP 341
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 49.7 bits (117), Expect = 4e-06
Identities = 33/78 (42%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 9 GSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPED-AEGRLAEARASTSS 67
G P P + P P PP G PS PPG PG P P+ EG +A A A TS+
Sbjct: 241 GPGPAPPNYSRPHGMGGPNMPPPG-PS-GVPPGMPGQPPGGPPKPWPEGPMANAAAPTST 298
Query: 68 PKPLVP-----RPGPAPP 80
P+ L+P RP PAPP
Sbjct: 299 PQKLIPPQPTGRPSPAPP 316
Score = 28.9 bits (63), Expect = 7.7
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 13 LDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDP 51
+ P T P P PP P PG P++P P
Sbjct: 303 IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAP 341
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 45.8 bits (107), Expect = 6e-05
Identities = 30/69 (43%), Positives = 30/69 (43%), Gaps = 15/69 (21%)
Query: 15 PGETP-PPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLVP 73
PG P PP L PG PP G P R PP PG P R P PLVP
Sbjct: 468 PGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIP-------------PPRPGMMRP-PLVP 513
Query: 74 RPGPAPPRL 82
GPAPP L
Sbjct: 514 PLGPAPPGL 522
Score = 35.4 bits (80), Expect = 0.082
Identities = 30/84 (35%), Positives = 30/84 (35%), Gaps = 11/84 (13%)
Query: 9 GSLPLDPGETPP------PDALEPGTPPCGDPSRSTPPGRPG----NPSEPDPEDAEGRL 58
G PL P PP P L PG PP G P PPG PG P P GR
Sbjct: 409 GPPPLGPPPAPPLRPPGPPTGLPPGPPP-GAPPFLRPPGMPGLRGPLPRLLPPGPPPGRP 467
Query: 59 AEARASTSSPKPLVPRPGPAPPRL 82
P P P PPRL
Sbjct: 468 PGPPPGPPPGLPPGPPPRGPPPRL 491
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 43.1 bits (100), Expect = 4e-04
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 15 PGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLVPR 74
P P A +P TP +PS +TP P P P+ A+ + E R P+P V
Sbjct: 2175 PSSPARPSAPKPSTPKSAEPSATTPSDA---PQPPAPQPAQDKAPEPR-----PEP-VRA 2225
Query: 75 PGPAPPRLSLDTLFSPIT 92
PAPP +L TL P+T
Sbjct: 2226 SKPAPPPQALQTLALPLT 2243
Score = 29.3 bits (64), Expect = 5.9
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 14 DPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLVP 73
+ G P D E G P D +P P +P + A R E R +S+ L P
Sbjct: 1964 ETGAATPMDWQEQGRAPSQDQEAPSPEALP-SPGQEPAAGASPRRGELRRGSSAESAL-P 2021
Query: 74 RPGP 77
R GP
Sbjct: 2022 RAGP 2025
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 43.1 bits (100), Expect = 4e-04
Identities = 24/80 (30%), Positives = 30/80 (37%), Gaps = 13/80 (16%)
Query: 15 PGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDA-------------EGRLAEA 61
P TPPP G PP G PP RPG P P P+ EG+ +
Sbjct: 47 PQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQG 106
Query: 62 RASTSSPKPLVPRPGPAPPR 81
+ P P +P PP+
Sbjct: 107 GNQSQGPPPRPGKPEGPPPQ 126
Score = 37.7 bits (86), Expect = 0.017
Identities = 24/72 (33%), Positives = 27/72 (37%), Gaps = 9/72 (12%)
Query: 19 PPPDALEP-GTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLA--------EARASTSSPK 69
PPP +P G PP G PP RPG P P P+ E S K
Sbjct: 176 PPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNK 235
Query: 70 PLVPRPGPAPPR 81
P P P P P+
Sbjct: 236 PQGPPPHPGKPQ 247
Score = 36.6 bits (83), Expect = 0.037
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 9/64 (14%)
Query: 19 PPPDALEP-GTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLVPRPGP 77
PPP +P G PP G PP RPG P P P+ + P P +P
Sbjct: 113 PPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGN--------QSQGPPPRPGKPEG 164
Query: 78 APPR 81
PP+
Sbjct: 165 PPPQ 168
Score = 34.7 bits (78), Expect = 0.14
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 9/64 (14%)
Query: 19 PPPDALEP-GTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLVPRPGP 77
PPP +P G PP G PP PG P P P+ + P P +P
Sbjct: 155 PPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGN--------QSQGPPPRPGKPEG 206
Query: 78 APPR 81
PP+
Sbjct: 207 PPPQ 210
Score = 32.7 bits (73), Expect = 0.53
Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 9/63 (14%)
Query: 19 PPPDALEPGTPPC-GDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLVPRPGP 77
PPP +P PP G PP PG P P P+ E P P P+ GP
Sbjct: 218 PPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQ-------EGNKPQRPPPPGRPQ-GP 269
Query: 78 APP 80
PP
Sbjct: 270 PPP 272
Score = 30.0 bits (66), Expect = 3.4
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Query: 8 EGSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGR 57
EG+ P + PPP G PP G + P G P P P GR
Sbjct: 253 EGNKP----QRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGR 298
Score = 29.6 bits (65), Expect = 4.5
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 12 PLDPGETPPP--DALEPGTPPCGDPSRSTPPGRPGNPSEP 49
P P PPP + +P PP G P PP + G P P
Sbjct: 263 PGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRP 302
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 42.7 bits (99), Expect = 5e-04
Identities = 31/92 (33%), Positives = 34/92 (36%), Gaps = 13/92 (14%)
Query: 15 PGETPPPDALEPGTPPCGDPSRSTPPGRP-GNPSEPDPEDAEG--RLAEARASTSSPKP- 70
P PPP PG PP G P R P G P G+P P G L T P+P
Sbjct: 333 PPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGPPRPP 392
Query: 71 ---------LVPRPGPAPPRLSLDTLFSPITQ 93
PRP P PP L P+ Q
Sbjct: 393 PYGYQRGPLPPPRPTPRPPVPPRGPLRGPLPQ 424
Score = 35.0 bits (79), Expect = 0.11
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 4/65 (6%)
Query: 15 PGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLVPR 74
P PPP AL PG PP P PP PG P S P P P
Sbjct: 244 PPPVPPPGALPPGIPPAMPP----PPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPG 299
Query: 75 PGPAP 79
P P
Sbjct: 300 GMPHP 304
Score = 33.1 bits (74), Expect = 0.41
Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 11/73 (15%)
Query: 13 LDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLV 72
L P PPP + P PP G + PPG P P+ P P G S +P
Sbjct: 232 LPPPGMPPPGSFPPPVPPPG----ALPPGIP--PAMPPPPMPPGAAGHGPPSAGTPGAGH 285
Query: 73 P-----RPGPAPP 80
P P P PP
Sbjct: 286 PGHGHSHPHPFPP 298
Score = 30.8 bits (68), Expect = 2.0
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Query: 19 PPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLVP-RPGP 77
PPP A P G S PPG P S P P G L P P+ P G
Sbjct: 216 PPPSAPNPVVSSLG--SGLPPPGMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPPGAAGH 273
Query: 78 APP 80
PP
Sbjct: 274 GPP 276
Score = 29.6 bits (65), Expect = 4.5
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 9 GSLPLDPGETP--PPDALEPGTPPCGDPSRSTP-PGRPGN-PSEPDP 51
G+LP PG P PP + PG G PS TP G PG+ S P P
Sbjct: 251 GALP--PGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHP 295
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 42.0 bits (97), Expect = 9e-04
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 12 PLDPGETPPPDALEPGT--PPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPK 69
P PG PP +PG+ PP P + PP + P++P P+ G S K
Sbjct: 481 PQQPGPAKPPPQ-QPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQ-PGSTKPPSQQPGSAK 538
Query: 70 PLVPRPGPAPPRLSLDTLFSPITQ 93
P +P PA P T P++Q
Sbjct: 539 PSAQQPSPAKPSAQQST--KPVSQ 560
Score = 38.1 bits (87), Expect = 0.013
Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Query: 19 PPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLVPRPGPA 78
PPP P PP P + PP + ++P P+ G + S KP +PG A
Sbjct: 479 PPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQ-PGPAKPSPQQPGSTKPPSQQPGSA 537
Query: 79 PPRLSLDTLFSPITQQ 94
P + P QQ
Sbjct: 538 KPSAQQPSPAKPSAQQ 553
Score = 37.0 bits (84), Expect = 0.028
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 13/68 (19%)
Query: 12 PLDPGETPPPDALEPGT--PPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPK 69
P P P A +PGT PP P + PP +P P++P + T S K
Sbjct: 332 PAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQ-----------QTGSEK 380
Query: 70 PLVPRPGP 77
P +PGP
Sbjct: 381 PSSEQPGP 388
Score = 35.0 bits (79), Expect = 0.11
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 15 PGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLVPR 74
PG+T P PP P + PP + P++P P+ G S KP +
Sbjct: 456 PGKTSAQQT-GPTKPPSQLPGPAKPPPQQPGPAKPPPQQ-PGSAKPPSQQPGSTKPPPQQ 513
Query: 75 PGPAPPRLSLDTLFSPITQQ 94
PGPA P P +QQ
Sbjct: 514 PGPAKPSPQQPGSTKPPSQQ 533
Score = 32.0 bits (71), Expect = 0.91
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Query: 16 GETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSS-PKPLVPR 74
GE+ P P PP P+ PP + +P E ++ A+ A S KPL +
Sbjct: 291 GESVKPSLPSPSKPPIQQPTPGKPPAQ-----QPGHEKSQPGPAKPPAQPSGLTKPLAQQ 345
Query: 75 PGPAPPRLSLDTLFSPITQQL 95
PG P + P Q L
Sbjct: 346 PGTVKPPVQPPGTTKPPAQPL 366
Score = 32.0 bits (71), Expect = 0.91
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 18 TPPPDALEPG--TPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLVPRP 75
TP P A +PG +P TP +PG P + G+ + + + P +P P
Sbjct: 417 TPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGP 476
Query: 76 GPAPPR 81
PP+
Sbjct: 477 AKPPPQ 482
Score = 32.0 bits (71), Expect = 0.91
Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 11/96 (11%)
Query: 15 PGETPPP---------DALEPGT--PPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARA 63
PG T PP +PG+ PP P + P + +P++P + + +++ +
Sbjct: 504 PGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGS 563
Query: 64 STSSPKPLVPRPGPAPPRLSLDTLFSPITQQLRYLL 99
P V PP L P+ LL
Sbjct: 564 GKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLL 599
Score = 29.3 bits (64), Expect = 5.9
Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 11/76 (14%)
Query: 15 PGETPPPDALEPGTPP--CGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARA--------S 64
PG PP + GTP P +P PG P + G++ +A
Sbjct: 405 PGPAKPPTQ-QVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQ 463
Query: 65 TSSPKPLVPRPGPAPP 80
T KP PGPA P
Sbjct: 464 TGPTKPPSQLPGPAKP 479
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 42.0 bits (97), Expect = 9e-04
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 12 PLDPGETPPPDALEPGT--PPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPK 69
P PG PP +PG+ PP P + PP + P++P P+ G S K
Sbjct: 481 PQQPGPAKPPPQ-QPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQ-PGSTKPPSQQPGSAK 538
Query: 70 PLVPRPGPAPPRLSLDTLFSPITQ 93
P +P PA P T P++Q
Sbjct: 539 PSAQQPSPAKPSAQQST--KPVSQ 560
Score = 38.1 bits (87), Expect = 0.013
Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Query: 19 PPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLVPRPGPA 78
PPP P PP P + PP + ++P P+ G + S KP +PG A
Sbjct: 479 PPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQ-PGPAKPSPQQPGSTKPPSQQPGSA 537
Query: 79 PPRLSLDTLFSPITQQ 94
P + P QQ
Sbjct: 538 KPSAQQPSPAKPSAQQ 553
Score = 37.0 bits (84), Expect = 0.028
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 13/68 (19%)
Query: 12 PLDPGETPPPDALEPGT--PPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPK 69
P P P A +PGT PP P + PP +P P++P + T S K
Sbjct: 332 PAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQ-----------QTGSEK 380
Query: 70 PLVPRPGP 77
P +PGP
Sbjct: 381 PSSEQPGP 388
Score = 35.0 bits (79), Expect = 0.11
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 15 PGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLVPR 74
PG+T P PP P + PP + P++P P+ G S KP +
Sbjct: 456 PGKTSAQQT-GPTKPPSQLPGPAKPPPQQPGPAKPPPQQ-PGSAKPPSQQPGSTKPPPQQ 513
Query: 75 PGPAPPRLSLDTLFSPITQQ 94
PGPA P P +QQ
Sbjct: 514 PGPAKPSPQQPGSTKPPSQQ 533
Score = 32.0 bits (71), Expect = 0.91
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Query: 16 GETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSS-PKPLVPR 74
GE+ P P PP P+ PP + +P E ++ A+ A S KPL +
Sbjct: 291 GESVKPSLPSPSKPPIQQPTPGKPPAQ-----QPGHEKSQPGPAKPPAQPSGLTKPLAQQ 345
Query: 75 PGPAPPRLSLDTLFSPITQQL 95
PG P + P Q L
Sbjct: 346 PGTVKPPVQPPGTTKPPAQPL 366
Score = 32.0 bits (71), Expect = 0.91
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 18 TPPPDALEPG--TPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLVPRP 75
TP P A +PG +P TP +PG P + G+ + + + P +P P
Sbjct: 417 TPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGP 476
Query: 76 GPAPPR 81
PP+
Sbjct: 477 AKPPPQ 482
Score = 32.0 bits (71), Expect = 0.91
Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 11/96 (11%)
Query: 15 PGETPPP---------DALEPGT--PPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARA 63
PG T PP +PG+ PP P + P + +P++P + + +++ +
Sbjct: 504 PGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGS 563
Query: 64 STSSPKPLVPRPGPAPPRLSLDTLFSPITQQLRYLL 99
P V PP L P+ LL
Sbjct: 564 GKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLL 599
Score = 29.3 bits (64), Expect = 5.9
Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 11/76 (14%)
Query: 15 PGETPPPDALEPGTPP--CGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARA--------S 64
PG PP + GTP P +P PG P + G++ +A
Sbjct: 405 PGPAKPPTQ-QVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQ 463
Query: 65 TSSPKPLVPRPGPAPP 80
T KP PGPA P
Sbjct: 464 TGPTKPPSQLPGPAKP 479
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 41.2 bits (95), Expect = 0.001
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 12 PLDPGETPPPDALEPGTPPCGDPSRSTPPGRP--GNPSEPDPEDAEGRLAEARASTSSPK 69
P +PG+ P P+ L P PP G+PS S G P P EP L + + S
Sbjct: 868 PEEPGQCPAPEEL-PLFPPPGEPSLSPLLGEPALSEPGEPPLSPLPEELPLSPSGEPSLS 926
Query: 70 PLVPRPGPAPPRLS 83
P + P P PP LS
Sbjct: 927 PQLMPPDPLPPPLS 940
Score = 35.8 bits (81), Expect = 0.063
Identities = 32/93 (34%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 9 GSLPLDPGETP-PPDALEPGTPPCGDPSRSTPPGRPGNPSEPD--PEDAEGRLAEAR--- 62
G P P P PP AL G P G + PP P P P P + EA+
Sbjct: 4280 GPRPQGPPRLPAPPGALSTG-PVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLPP 4338
Query: 63 ASTSSPKPLVPRPGPAPPRLS------LDTLFS 89
+PKP P P P R+S DTLFS
Sbjct: 4339 THPGTPKPQGPTLEPPPGRVSPAAAQLADTLFS 4371
Score = 33.5 bits (75), Expect = 0.31
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 18 TPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPED--AEGRLAEARASTSSPKPLVPRP 75
TP +EP +P G + PP + PS P D G + A PL PRP
Sbjct: 2332 TPRASQVEPQSPGLGLRPQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQ----PPLTPRP 2387
Query: 76 GPAPP 80
P PP
Sbjct: 2388 QPPPP 2392
Score = 32.0 bits (71), Expect = 0.91
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 12 PLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPL 71
P + PP P +PP + SR +PP +P P PE++ S SP P+
Sbjct: 602 PFEESPLSPPPEESPLSPP-PEASRLSPPPED-SPMSPPPEESP-MSPPPEVSRLSPLPV 658
Query: 72 VPRPGPAP 79
V R P P
Sbjct: 659 VSRLSPPP 666
Score = 32.0 bits (71), Expect = 0.91
Identities = 29/86 (33%), Positives = 34/86 (39%), Gaps = 22/86 (25%)
Query: 11 LPLDPGETPPPDALEPGTPPCGDPSR--------STPPGRPGNPSEPDPE---------- 52
L L P E PP AL P P D R + PP P P P PE
Sbjct: 2345 LGLRPQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQPPLTP-RPQPPPPESCCALPPRSL 2403
Query: 53 --DAEGRL-AEARASTSSPKPLVPRP 75
D R+ A ++ +SS PL PRP
Sbjct: 2404 PSDPFSRVPASPQSQSSSQSPLTPRP 2429
Score = 31.6 bits (70), Expect = 1.2
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 15 PGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSP---KPL 71
P E+PP ALE P + S +PP +P P PE+ + S P P+
Sbjct: 523 PEESPPSPALETPLSPPPEASPLSPPFEE-SPLSPPPEELPTSPPPEASRLSPPPEESPM 581
Query: 72 VPRP--GPAPPRLSLDTLFSPITQ 93
P P P P LF P +
Sbjct: 582 SPPPEESPMSPPPEASRLFPPFEE 605
Score = 29.6 bits (65), Expect = 4.5
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 12 PLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDA 54
P + +PPP+A PP P T P +P+ P PED+
Sbjct: 675 PEESPTSPPPEASRLSPPPEDSP---TSPPPEDSPASPPPEDS 714
Score = 29.3 bits (64), Expect = 5.9
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 9/74 (12%)
Query: 11 LPLDPGETPPPDALEPGTPPCGDPSRSTP------PGRPGNPSEPDPEDAEGRLAEARAS 64
LP+ +PPP+ PP P+ P P +P+ P PED+ +
Sbjct: 656 LPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSL 715
Query: 65 TSSP---KPLVPRP 75
S P PL+P P
Sbjct: 716 MSLPLEESPLLPLP 729
Score = 28.9 bits (63), Expect = 7.7
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 10 SLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPK 69
S P + T PP P +PP D S P +P P PE+ + + SP+
Sbjct: 690 SPPPEDSPTSPPPEDSPASPPPEDSLMSLP--LEESPLLPLPEEPQ-LCPRSEGPHLSPR 746
Query: 70 PLVPR--PGPAPPRLS 83
P P P P P LS
Sbjct: 747 PEEPHLSPRPEEPHLS 762
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 41.2 bits (95), Expect = 0.001
Identities = 22/66 (33%), Positives = 25/66 (37%)
Query: 15 PGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLVPR 74
PG PPP PG P + S PP P P P+P A + P P
Sbjct: 538 PGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGT 597
Query: 75 PGPAPP 80
GP PP
Sbjct: 598 DGPVPP 603
Score = 37.4 bits (85), Expect = 0.022
Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 1/80 (1%)
Query: 1 MATEQWFEGSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAE 60
+AT + P P +P PD L P P + PP PG PS + + A
Sbjct: 508 VATPSGGDAPTPGVPTGSPSPD-LAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAP 566
Query: 61 ARASTSSPKPLVPRPGPAPP 80
+ P P P PG PP
Sbjct: 567 PLPGSPEPPPAPPLPGDLPP 586
Score = 33.5 bits (75), Expect = 0.31
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 15 PGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRL-AEARASTSSPKPL 71
PG+ PPP P PP G PP P P P DA GR +E + KP+
Sbjct: 581 PGDLPPPPP--PPPPPPGTDGPVPPPPPPPPPPPGGPPDALGRRDSELGPGVKAKKPI 636
Score = 32.3 bits (72), Expect = 0.69
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 14/80 (17%)
Query: 11 LPLDPGETPPPDALEPGTP---------PCGDPS-RSTPPGRPGNPSEPDPEDAEGRLAE 60
LP+ DA PG P P +P+ + PP P P P P++A
Sbjct: 504 LPVAVATPSGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEA----PP 559
Query: 61 ARASTSSPKPLVPRPGPAPP 80
+ + P P P P PAPP
Sbjct: 560 SAPPQAPPLPGSPEPPPAPP 579
Score = 32.3 bits (72), Expect = 0.69
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Query: 9 GSLPLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSP 68
G LP P PPP + PP P P G P D E G A+ T
Sbjct: 582 GDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPPDALGRRDSELGPGVKAKKPIQTKFR 641
Query: 69 KPLVPRPGPAPPRLSLDTLFSPITQQ 94
PL+ P +++ T+F+ + +
Sbjct: 642 MPLLNWVALKPSQIT-GTVFTELNDE 666
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 40.4 bits (93), Expect = 0.003
Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 13/75 (17%)
Query: 19 PPPDALEPGTPPCGDPSRST-------PPGRPGNPSEPDPE---DAEGRLAEARASTSSP 68
PPP +P P PS S+ PP RPG P P D RL + S SS
Sbjct: 285 PPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSS 344
Query: 69 KPLVPRP---GPAPP 80
P +P P GP PP
Sbjct: 345 TPPLPSPGRSGPLPP 359
Score = 35.8 bits (81), Expect = 0.063
Identities = 23/83 (27%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 9 GSLPLDPGETPPPDALEPG-------TPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEA 61
G LP P E PPP +P PP + ST P P P + +
Sbjct: 355 GPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGP 414
Query: 62 RASTSSPKPLVPRPGPAPPRLSL 84
R +P P P PP S+
Sbjct: 415 RPPLPPDRPSAGAPPPPPPSTSI 437
Score = 33.5 bits (75), Expect = 0.31
Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 12/81 (14%)
Query: 10 SLPLDPGETPPPDALEPGTPPCGDPSRS-TPPGRPGNPSEPD----PEDAEGRLAEA--- 61
S P PG P P PP +P R+ PP RP S+PD P + R ++
Sbjct: 142 SPPSGPGRFPVPSPGHRSGPP--EPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPH 199
Query: 62 -RASTSSP-KPLVPRPGPAPP 80
R S P P P PGP PP
Sbjct: 200 NRGSPPVPGGPRQPSPGPTPP 220
Score = 33.1 bits (74), Expect = 0.41
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 11/76 (14%)
Query: 14 DPGETPPP--------DALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARAST 65
D G + PP + +P +PP G P R P PG+ S P PE R+ R
Sbjct: 120 DSGGSRPPLLPPGGRSTSAKPFSPPSG-PGRFPVPS-PGHRSGP-PEPQRNRMPPPRPDV 176
Query: 66 SSPKPLVPRPGPAPPR 81
S +P P P+ PR
Sbjct: 177 GSKPDSIPPPVPSTPR 192
Score = 32.3 bits (72), Expect = 0.69
Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 12/78 (15%)
Query: 10 SLPLDPGETPPPDALEPGTPPCGD-PS---RSTPPGRPGNPSEPDPEDAEGRLAEARAST 65
S LD PPP PP G+ PS + PP P N P P A ++A
Sbjct: 257 SRALDDKPPPPP-------PPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPS-ASSQAPP 308
Query: 66 SSPKPLVPRPGPAPPRLS 83
P P P P P PP S
Sbjct: 309 PPPPPSRPGPPPLPPSSS 326
Score = 31.6 bits (70), Expect = 1.2
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 28/97 (28%)
Query: 12 PLDPGETPPPDALEPGTPPCGDPSRSTPPGR-----PGNPSEPDPEDAE----------- 55
P P PD++ P P P +S+P R PG P +P P
Sbjct: 171 PPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTAL 230
Query: 56 --GRLAEARASTSSP----KPLVPRPG------PAPP 80
G + ++ S+SSP PL P P P PP
Sbjct: 231 GGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPP 267
Score = 30.4 bits (67), Expect = 2.6
Identities = 24/78 (30%), Positives = 27/78 (34%), Gaps = 20/78 (25%)
Query: 23 ALEPGTPPCGDPSRS----------------TPPGRPGNPSEPDPEDAEGRLAEARAST- 65
+L TPP P RS PPGR G P P G + A +T
Sbjct: 340 SLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATP 399
Query: 66 ---SSPKPLVPRPGPAPP 80
S PR GP PP
Sbjct: 400 QLPSRSGVDSPRSGPRPP 417
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 40.4 bits (93), Expect = 0.003
Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 13/75 (17%)
Query: 19 PPPDALEPGTPPCGDPSRST-------PPGRPGNPSEPDPE---DAEGRLAEARASTSSP 68
PPP +P P PS S+ PP RPG P P D RL + S SS
Sbjct: 285 PPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSS 344
Query: 69 KPLVPRP---GPAPP 80
P +P P GP PP
Sbjct: 345 TPPLPSPGRSGPLPP 359
Score = 35.8 bits (81), Expect = 0.063
Identities = 23/83 (27%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 9 GSLPLDPGETPPPDALEPG-------TPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEA 61
G LP P E PPP +P PP + ST P P P + +
Sbjct: 355 GPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGP 414
Query: 62 RASTSSPKPLVPRPGPAPPRLSL 84
R +P P P PP S+
Sbjct: 415 RPPLPPDRPSAGAPPPPPPSTSI 437
Score = 33.5 bits (75), Expect = 0.31
Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 12/81 (14%)
Query: 10 SLPLDPGETPPPDALEPGTPPCGDPSRS-TPPGRPGNPSEPD----PEDAEGRLAEA--- 61
S P PG P P PP +P R+ PP RP S+PD P + R ++
Sbjct: 142 SPPSGPGRFPVPSPGHRSGPP--EPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPH 199
Query: 62 -RASTSSP-KPLVPRPGPAPP 80
R S P P P PGP PP
Sbjct: 200 NRGSPPVPGGPRQPSPGPTPP 220
Score = 33.1 bits (74), Expect = 0.41
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 11/76 (14%)
Query: 14 DPGETPPP--------DALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARAST 65
D G + PP + +P +PP G P R P PG+ S P PE R+ R
Sbjct: 120 DSGGSRPPLLPPGGRSTSAKPFSPPSG-PGRFPVPS-PGHRSGP-PEPQRNRMPPPRPDV 176
Query: 66 SSPKPLVPRPGPAPPR 81
S +P P P+ PR
Sbjct: 177 GSKPDSIPPPVPSTPR 192
Score = 32.3 bits (72), Expect = 0.69
Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 12/78 (15%)
Query: 10 SLPLDPGETPPPDALEPGTPPCGD-PS---RSTPPGRPGNPSEPDPEDAEGRLAEARAST 65
S LD PPP PP G+ PS + PP P N P P A ++A
Sbjct: 257 SRALDDKPPPPP-------PPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPS-ASSQAPP 308
Query: 66 SSPKPLVPRPGPAPPRLS 83
P P P P P PP S
Sbjct: 309 PPPPPSRPGPPPLPPSSS 326
Score = 31.6 bits (70), Expect = 1.2
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 28/97 (28%)
Query: 12 PLDPGETPPPDALEPGTPPCGDPSRSTPPGR-----PGNPSEPDPEDAE----------- 55
P P PD++ P P P +S+P R PG P +P P
Sbjct: 171 PPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTAL 230
Query: 56 --GRLAEARASTSSP----KPLVPRPG------PAPP 80
G + ++ S+SSP PL P P P PP
Sbjct: 231 GGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPP 267
Score = 30.4 bits (67), Expect = 2.6
Identities = 24/78 (30%), Positives = 27/78 (34%), Gaps = 20/78 (25%)
Query: 23 ALEPGTPPCGDPSRS----------------TPPGRPGNPSEPDPEDAEGRLAEARAST- 65
+L TPP P RS PPGR G P P G + A +T
Sbjct: 340 SLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATP 399
Query: 66 ---SSPKPLVPRPGPAPP 80
S PR GP PP
Sbjct: 400 QLPSRSGVDSPRSGPRPP 417
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 40.4 bits (93), Expect = 0.003
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 11/79 (13%)
Query: 4 EQWFEGSLPLDPGETPPPDALEPGTP-PCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEAR 62
E+W + P P T P TP P S PPG P+ P P+ A
Sbjct: 570 ERWTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSA-------- 621
Query: 63 ASTSS--PKPLVPRPGPAP 79
STS P+P P PGPAP
Sbjct: 622 GSTSGPVPQPACPPPGPAP 640
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 15 PGETPPPDALEPGTPPCGDPSRST--PPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLV 72
P TP P ++P +PP G ++ T P G+ S P P+ A A T P P+
Sbjct: 591 PAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGPPGPI- 649
Query: 73 PRPGPAPPRLSLDT 86
P PAPP+++ T
Sbjct: 650 --PVPAPPQIATST 661
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 40.4 bits (93), Expect = 0.003
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 11/79 (13%)
Query: 4 EQWFEGSLPLDPGETPPPDALEPGTP-PCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEAR 62
E+W + P P T P TP P S PPG P+ P P+ A
Sbjct: 570 ERWTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSA-------- 621
Query: 63 ASTSS--PKPLVPRPGPAP 79
STS P+P P PGPAP
Sbjct: 622 GSTSGPVPQPACPPPGPAP 640
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 15 PGETPPPDALEPGTPPCGDPSRST--PPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLV 72
P TP P ++P +PP G ++ T P G+ S P P+ A A T P P+
Sbjct: 591 PAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGPPGPI- 649
Query: 73 PRPGPAPPRLSLDT 86
P PAPP+++ T
Sbjct: 650 --PVPAPPQIATST 661
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 40.4 bits (93), Expect = 0.003
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 11/79 (13%)
Query: 4 EQWFEGSLPLDPGETPPPDALEPGTP-PCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEAR 62
E+W + P P T P TP P S PPG P+ P P+ A
Sbjct: 570 ERWTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSA-------- 621
Query: 63 ASTSS--PKPLVPRPGPAP 79
STS P+P P PGPAP
Sbjct: 622 GSTSGPVPQPACPPPGPAP 640
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 15 PGETPPPDALEPGTPPCGDPSRST--PPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLV 72
P TP P ++P +PP G ++ T P G+ S P P+ A A T P P+
Sbjct: 591 PAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGPPGPI- 649
Query: 73 PRPGPAPPRLSLDT 86
P PAPP+++ T
Sbjct: 650 --PVPAPPQIATST 661
>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
sapiens]
Length = 677
Score = 40.4 bits (93), Expect = 0.003
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 11/79 (13%)
Query: 4 EQWFEGSLPLDPGETPPPDALEPGTP-PCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEAR 62
E+W + P P T P TP P S PPG P+ P P+ A
Sbjct: 431 ERWTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSA-------- 482
Query: 63 ASTSS--PKPLVPRPGPAP 79
STS P+P P PGPAP
Sbjct: 483 GSTSGPVPQPACPPPGPAP 501
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 15 PGETPPPDALEPGTPPCGDPSRST--PPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLV 72
P TP P ++P +PP G ++ T P G+ S P P+ A A T P P+
Sbjct: 452 PAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGPPGPI- 510
Query: 73 PRPGPAPPRLSLDT 86
P PAPP+++ T
Sbjct: 511 --PVPAPPQIATST 522
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 40.4 bits (93), Expect = 0.003
Identities = 39/144 (27%), Positives = 53/144 (36%), Gaps = 30/144 (20%)
Query: 12 PLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPL 71
PL PP +P PP +P RS P P EP+PE R +T +P P
Sbjct: 218 PLAATSAAPPPQPQPQPPPQPEP-RSVPQPEP----EPEPE---------REATPTPAPA 263
Query: 72 VPRPGPAPPRLSLDTLFSPITQQLRYLLKKADDFQSYLLYSRDQVQKEQLAKAMPTFLQ- 130
P PAPP T QS+ L + K A P +
Sbjct: 264 APEEPPAPPEFRCQVCGQSFT-------------QSWFLKGHMRKHKASFDHACPVCGRC 310
Query: 131 MCEPYFL--YLEAAARSIPPIYGP 152
EP+FL +++ A + P+ P
Sbjct: 311 FKEPWFLKNHMKVHASKLGPLRAP 334
>gi|156415998 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 40.4 bits (93), Expect = 0.003
Identities = 39/144 (27%), Positives = 53/144 (36%), Gaps = 30/144 (20%)
Query: 12 PLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPL 71
PL PP +P PP +P RS P P EP+PE R +T +P P
Sbjct: 218 PLAATSAAPPPQPQPQPPPQPEP-RSVPQPEP----EPEPE---------REATPTPAPA 263
Query: 72 VPRPGPAPPRLSLDTLFSPITQQLRYLLKKADDFQSYLLYSRDQVQKEQLAKAMPTFLQ- 130
P PAPP T QS+ L + K A P +
Sbjct: 264 APEEPPAPPEFRCQVCGQSFT-------------QSWFLKGHMRKHKASFDHACPVCGRC 310
Query: 131 MCEPYFL--YLEAAARSIPPIYGP 152
EP+FL +++ A + P+ P
Sbjct: 311 FKEPWFLKNHMKVHASKLGPLRAP 334
>gi|156415996 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 40.4 bits (93), Expect = 0.003
Identities = 39/144 (27%), Positives = 53/144 (36%), Gaps = 30/144 (20%)
Query: 12 PLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPL 71
PL PP +P PP +P RS P P EP+PE R +T +P P
Sbjct: 218 PLAATSAAPPPQPQPQPPPQPEP-RSVPQPEP----EPEPE---------REATPTPAPA 263
Query: 72 VPRPGPAPPRLSLDTLFSPITQQLRYLLKKADDFQSYLLYSRDQVQKEQLAKAMPTFLQ- 130
P PAPP T QS+ L + K A P +
Sbjct: 264 APEEPPAPPEFRCQVCGQSFT-------------QSWFLKGHMRKHKASFDHACPVCGRC 310
Query: 131 MCEPYFL--YLEAAARSIPPIYGP 152
EP+FL +++ A + P+ P
Sbjct: 311 FKEPWFLKNHMKVHASKLGPLRAP 334
>gi|110815800 WD repeat domain 32 [Homo sapiens]
Length = 559
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 18 TPPPDALEPGTPPCGDPSRSTPPGRPGNPS-EPDPEDAEGRLAEARASTSSPKPLVPRPG 76
T PP L PG P + P RPG PS P P E L A S+++ P P P
Sbjct: 32 TGPPSPLHPGADATHPPPPARSPRRPGAPSLSPAPRSGELGLPGAPESSTASAPGEPSP- 90
Query: 77 PAPP 80
P+PP
Sbjct: 91 PSPP 94
Score = 29.3 bits (64), Expect = 5.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 12 PLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEP 49
P P +P P + E G P + S ++ PG P PS P
Sbjct: 57 PGAPSLSPAPRSGELGLPGAPESSTASAPGEPSPPSPP 94
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 39.7 bits (91), Expect = 0.004
Identities = 27/74 (36%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 12 PLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPL 71
P + G+ PPP L PG P P PPG P P P G + P P
Sbjct: 266 PPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPP--PPVPGYGPPPGPPPPQQGPPPPPGPF 323
Query: 72 VPR-PGPAPPRLSL 84
PR PGP P L+L
Sbjct: 324 PPRPPGPLGPPLTL 337
Score = 35.0 bits (79), Expect = 0.11
Identities = 27/83 (32%), Positives = 30/83 (36%), Gaps = 5/83 (6%)
Query: 9 GSLPLDPGET-PPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSS 67
G PL P PPP G PP P + PP PG P P G L
Sbjct: 285 GQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPG----PFPPRPPGPLGPPLTLAPP 340
Query: 68 PKPLVPRPGPAPPRLSLDTLFSP 90
P P PG PP ++ F P
Sbjct: 341 PHLPGPPPGAPPPAPHVNPAFFP 363
Score = 33.5 bits (75), Expect = 0.31
Identities = 27/85 (31%), Positives = 32/85 (37%), Gaps = 15/85 (17%)
Query: 12 PLDPGETPPPDAL-------EPGTPPCGD---PSRSTPPGRPGNPSEP--DPEDAEGRLA 59
P G+TPP L PG PP G P + PP R P P P G+
Sbjct: 229 PFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPP 288
Query: 60 EARASTSSPKPLV---PRPGPAPPR 81
P P+ P PGP PP+
Sbjct: 289 LGPLPPGPPPPVPGYGPPPGPPPPQ 313
Score = 32.3 bits (72), Expect = 0.69
Identities = 24/73 (32%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Query: 9 GSLPLDPGETPPPDALEPGTP-PCGDP-SRSTPPGRPGNPSEPDPEDAEGRLAEARASTS 66
G P G PPP P P P G P + + PP PG P P A T+
Sbjct: 308 GPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTN 367
Query: 67 SPKPLVPRPGPAP 79
S P GP P
Sbjct: 368 SGMPTSDSRGPPP 380
Score = 32.3 bits (72), Expect = 0.69
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 11/90 (12%)
Query: 12 PLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPL 71
P PG PP L P G P + PP NP+ P G + + P P
Sbjct: 325 PRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGM---PTSDSRGPPPT 381
Query: 72 VP--RPGP------APPRLSLDTLFSPITQ 93
P RP P PP +DT +P+++
Sbjct: 382 DPYGRPPPYDRGDYGPPGREMDTARTPLSE 411
Score = 30.8 bits (68), Expect = 2.0
Identities = 25/72 (34%), Positives = 26/72 (36%), Gaps = 15/72 (20%)
Query: 15 PGETPPPDALEPGTPPCGDPSRSTPP----GRPGNPSEPDPEDAEGRLAEARASTSSPKP 70
PG P PG PP P+ TPP G PG P P P L P P
Sbjct: 212 PGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVL---------PPP 262
Query: 71 LV--PRPGPAPP 80
L P G PP
Sbjct: 263 LAGPPNRGDRPP 274
Score = 29.6 bits (65), Expect = 4.5
Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Query: 16 GETPPPDALEPGTPPCGDPSRSTPPGR-PGNPSEPDPEDAEGRLAEARASTSSPKPLVPR 74
G+ PP P G R PG PG P P G A + P+P +
Sbjct: 184 GKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGP 243
Query: 75 PGPAPP 80
PGP P
Sbjct: 244 PGPPGP 249
>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
Length = 1690
Score = 39.3 bits (90), Expect = 0.006
Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
Query: 22 DALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAE------ARASTSSPKPLVPRP 75
D PG P G + PPG PG+ P P A GR + P P PR
Sbjct: 1214 DPGSPGISPPGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQGPPGPDGPRG 1273
Query: 76 GPAPPRL--SLDTL 87
P PP L S+D L
Sbjct: 1274 APGPPGLPGSVDLL 1287
Score = 32.0 bits (71), Expect = 0.91
Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Query: 12 PLDPGETPPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPL 71
P PG D L CG P PPG PG P +G+ + + P P
Sbjct: 1275 PGPPGLPGSVDLLRGEPGDCGLPGPPGPPGPPGPPGYKGFPGCDGKDGQ-KGPVGFPGPQ 1333
Query: 72 VPRPGPAPP 80
P P PP
Sbjct: 1334 GPHGFPGPP 1342
Score = 30.8 bits (68), Expect = 2.0
Identities = 25/83 (30%), Positives = 27/83 (32%), Gaps = 21/83 (25%)
Query: 19 PPPDALEPGTPPC-------------------GDPSRSTPPGRPGNPSEPDPEDAEG-RL 58
PP EPG+P C G P R PPG G P P G R
Sbjct: 1083 PPGPKGEPGSPGCPGHFGASGEQGLPGIQGPRGSPGRPGPPGSSGPPGCPGDHGMPGLRG 1142
Query: 59 AEARASTSSPKPLVPRPG-PAPP 80
P+ L PG P PP
Sbjct: 1143 QPGEMGDPGPRGLQGDPGIPGPP 1165
Score = 30.0 bits (66), Expect = 3.4
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 19 PPPDALEPGTPPCGDPSRSTPPGRPGNPSEPDPEDAEGRLAEARASTSSPKPLVP-RPGP 77
PP + E G P G P + PG PG+P P + G + + P +P RPG
Sbjct: 823 PPGHSCERGAP--GIPGQPGLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGA 880
Query: 78 -APPRL 82
PP L
Sbjct: 881 HGPPGL 886
Score = 29.3 bits (64), Expect = 5.9
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 15 PGETPPPDALEPGTPPC----GDPSRSTPPGRPGNPSEPDPEDAEGR 57
PG PP P PP G P PG PG+P P+ +G+
Sbjct: 615 PGPLGPPGKAGPVGPPGLGFPGPPGERGHPGVPGHPGVRGPDGLKGQ 661
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.139 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,841,813
Number of Sequences: 37866
Number of extensions: 1144232
Number of successful extensions: 14408
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 674
Number of HSP's that attempted gapping in prelim test: 8068
Number of HSP's gapped (non-prelim): 5809
length of query: 368
length of database: 18,247,518
effective HSP length: 104
effective length of query: 264
effective length of database: 14,309,454
effective search space: 3777695856
effective search space used: 3777695856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.