Guide to the Human Genome
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Name: TAS2R4 Sequence: fasta or formatted (299aa) NCBI GI: 8394402
Description:

taste receptor T2R4

Referenced in:

Taste Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         14           1
 C cysteine            2.3          7           1
 D aspartate           1.0          3           1
 E glutamate           1.3          4           1
 F phenylalanine       8.0         24           2
 G glycine             3.0          9           1
 H histidine           2.3          7           1
 I isoleucine         10.0         30           3
 K lysine              5.0         15           2
 L leucine            14.7         44           3
 M methionine          3.0          9           1
 N asparagine          4.7         14           2
 P proline             3.0          9           1
 Q glutamine           2.3          7           1
 R arginine            3.3         10           2
 S serine             11.0         33           3
 T threonine           7.4         22           2
 V valine              8.0         24           2
 W tryptophan          1.0          3           1
 Y tyrosine            3.7         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   taste receptor T2R4 
TAS2R7                0.211   taste receptor, type 2, member 7 
TAS2R39               0.202   taste receptor, type 2, member 39 
TAS2R3                0.195   taste receptor T2R3 
TAS2R40               0.188   taste receptor, type 2, member 40 
TAS2R41               0.182   taste receptor, type 2, member 41 
TAS2R8                0.168   taste receptor, type 2, member 8 
TAS2R10               0.159   taste receptor, type 2, member 10 
TAS2R20               0.159   taste receptor, type 2, member 20 
TAS2R9                0.157   taste receptor, type 2, member 9 
TAS2R1                0.148   taste receptor T2R1 
TAS2R38               0.148   taste receptor, type 2, member 38 
TAS2R13               0.145   taste receptor, type 2, member 13 
TAS2R43               0.143   taste receptor, type 2, member 43 
TAS2R31               0.141   taste receptor, type 2, member 31 
TAS2R45               0.136   taste receptor, type 2, member 45 
TAS2R5                0.136   taste receptor T2R5 
TAS2R46               0.134   taste receptor, type 2, member 46 
TAS2R50               0.134   taste receptor, type 2, member 50 
TAS2R42               0.132   taste receptor, type 2, member 42 
TAS2R14               0.132   taste receptor, type 2, member 14 
TAS2R60               0.132   taste receptor, type 2, member 60 
TAS2R30               0.123   type 2 taste receptor member 30 
TAS2R19               0.120   taste receptor, type 2, member 19 
TAS2R16               0.098   taste receptor T2R16 
ABCA8                 0.013   ATP-binding cassette, sub-family A member 8 
NHEDC2                0.013   Na+/H+ exchanger domain containing 2 
GPR161                0.013   G protein-coupled receptor 161 isoform 2 
OPN4                  0.011   opsin 4 isoform 1 
GPR17                 0.011   G protein-coupled receptor 17 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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