Search of human proteins with 82546847

Search of human proteins with 82546847

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|82546847 hypothetical protein LOC9907 [Homo sapiens]
         (807 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|82546847 hypothetical protein LOC9907 [Homo sapiens]              1578   0.0  
gi|117320531 nuclear factor of kappa light polypeptide gene enha...    33   0.81 
gi|117320540 nuclear factor of kappa light polypeptide gene enha...    33   0.81 
gi|117320527 nuclear factor of kappa light polypeptide gene enha...    33   0.81 
gi|66880553 Fanconi anemia, complementation group A isoform a [H...    33   0.81 
gi|239740825 PREDICTED: hypothetical protein XP_002344066 [Homo ...    31   5.2  
gi|4507691 transformation/transcription domain-associated protei...    31   5.2  
gi|4758532 ral guanine nucleotide dissociation stimulator-like 2...    31   5.2  
gi|199560438 hypothetical protein LOC283643 isoform 2 [Homo sapi...    30   6.8  
gi|239740775 PREDICTED: hypothetical protein [Homo sapiens]            30   8.9  
gi|199560536 hypothetical protein LOC283643 isoform 4 [Homo sapi...    30   8.9  
gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]           30   8.9  
gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens]           30   8.9  

>gi|82546847 hypothetical protein LOC9907 [Homo sapiens]
          Length = 807

 Score = 1578 bits (4086), Expect = 0.0
 Identities = 807/807 (100%), Positives = 807/807 (100%)

Query: 1   MFSAGAESLLHQAREIQDEELKKFCSRICKLLQAEDLGPDTLDSLQRLFLIISATKYSRR 60
           MFSAGAESLLHQAREIQDEELKKFCSRICKLLQAEDLGPDTLDSLQRLFLIISATKYSRR
Sbjct: 1   MFSAGAESLLHQAREIQDEELKKFCSRICKLLQAEDLGPDTLDSLQRLFLIISATKYSRR 60

Query: 61  LEKTCVDLLQATLGLPACPEQLQVLCAAILREMSPSDSLSLAWDHTQNSRQLSLVASVLL 120
           LEKTCVDLLQATLGLPACPEQLQVLCAAILREMSPSDSLSLAWDHTQNSRQLSLVASVLL
Sbjct: 61  LEKTCVDLLQATLGLPACPEQLQVLCAAILREMSPSDSLSLAWDHTQNSRQLSLVASVLL 120

Query: 121 AQGDRNEEVRAVGQGVLRALESRQPEGPSLRHLLPVMAKVVVLSPGTLQEDQATLLSKRL 180
           AQGDRNEEVRAVGQGVLRALESRQPEGPSLRHLLPVMAKVVVLSPGTLQEDQATLLSKRL
Sbjct: 121 AQGDRNEEVRAVGQGVLRALESRQPEGPSLRHLLPVMAKVVVLSPGTLQEDQATLLSKRL 180

Query: 181 VDWLRYASLQQGLPHSGGFFSTPRARQPGPVTEVDGAVATDFFTVLSSGHRFTDDQWLNV 240
           VDWLRYASLQQGLPHSGGFFSTPRARQPGPVTEVDGAVATDFFTVLSSGHRFTDDQWLNV
Sbjct: 181 VDWLRYASLQQGLPHSGGFFSTPRARQPGPVTEVDGAVATDFFTVLSSGHRFTDDQWLNV 240

Query: 241 QAFSMLRAWLLHSGPEGPGTLDTDDRSEQEGSTLSVISATSSAGRLLPPRERLREVAFEY 300
           QAFSMLRAWLLHSGPEGPGTLDTDDRSEQEGSTLSVISATSSAGRLLPPRERLREVAFEY
Sbjct: 241 QAFSMLRAWLLHSGPEGPGTLDTDDRSEQEGSTLSVISATSSAGRLLPPRERLREVAFEY 300

Query: 301 CQRLIEQSNRRALRKGDSDLQKACLVEAVLVLDVLCRQDPSFLYRSLSCLKALHGRVRGD 360
           CQRLIEQSNRRALRKGDSDLQKACLVEAVLVLDVLCRQDPSFLYRSLSCLKALHGRVRGD
Sbjct: 301 CQRLIEQSNRRALRKGDSDLQKACLVEAVLVLDVLCRQDPSFLYRSLSCLKALHGRVRGD 360

Query: 361 PASVRVLLPLAHFFLSHGEAAAVDSEAVYQHLFTRIPVEQFHSPMLAFEFIQFCRDNLHL 420
           PASVRVLLPLAHFFLSHGEAAAVDSEAVYQHLFTRIPVEQFHSPMLAFEFIQFCRDNLHL
Sbjct: 361 PASVRVLLPLAHFFLSHGEAAAVDSEAVYQHLFTRIPVEQFHSPMLAFEFIQFCRDNLHL 420

Query: 421 FSGHLSTLRLSFPNLFKFLAWNSPPLTSEFVALLPALVDAGTALEMLHALLDLPCLTAVL 480
           FSGHLSTLRLSFPNLFKFLAWNSPPLTSEFVALLPALVDAGTALEMLHALLDLPCLTAVL
Sbjct: 421 FSGHLSTLRLSFPNLFKFLAWNSPPLTSEFVALLPALVDAGTALEMLHALLDLPCLTAVL 480

Query: 481 DLQLRSAPAASERPLWDTSLRAPSCLEAFRDPQFQGLFQYLLRPKASGATERLAPLHQLL 540
           DLQLRSAPAASERPLWDTSLRAPSCLEAFRDPQFQGLFQYLLRPKASGATERLAPLHQLL
Sbjct: 481 DLQLRSAPAASERPLWDTSLRAPSCLEAFRDPQFQGLFQYLLRPKASGATERLAPLHQLL 540

Query: 541 QPMAGCARVAQCAQAVPTLLQAFFSAVTQVADGSLINQLALLLLGRSDSLYPAPGYAAGV 600
           QPMAGCARVAQCAQAVPTLLQAFFSAVTQVADGSLINQLALLLLGRSDSLYPAPGYAAGV
Sbjct: 541 QPMAGCARVAQCAQAVPTLLQAFFSAVTQVADGSLINQLALLLLGRSDSLYPAPGYAAGV 600

Query: 601 HSVLSSQFLALCTLKPSLVVELARDLLEFLGSVNGLCSRASLVTSVVWAIGEYLSVTYDR 660
           HSVLSSQFLALCTLKPSLVVELARDLLEFLGSVNGLCSRASLVTSVVWAIGEYLSVTYDR
Sbjct: 601 HSVLSSQFLALCTLKPSLVVELARDLLEFLGSVNGLCSRASLVTSVVWAIGEYLSVTYDR 660

Query: 661 RCTVEQINKFFEALEALLFEVTQCRPSAALPRCPPQVVTVLMTTLTKLASRSQDLIPRAS 720
           RCTVEQINKFFEALEALLFEVTQCRPSAALPRCPPQVVTVLMTTLTKLASRSQDLIPRAS
Sbjct: 661 RCTVEQINKFFEALEALLFEVTQCRPSAALPRCPPQVVTVLMTTLTKLASRSQDLIPRAS 720

Query: 721 LLLSKMRTLAHSPATSSTHSEEGAEAIRTRATELLTLLKMPSVAQFVLTPSTEVCSPRYH 780
           LLLSKMRTLAHSPATSSTHSEEGAEAIRTRATELLTLLKMPSVAQFVLTPSTEVCSPRYH
Sbjct: 721 LLLSKMRTLAHSPATSSTHSEEGAEAIRTRATELLTLLKMPSVAQFVLTPSTEVCSPRYH 780

Query: 781 RDANTALPLALRTVSRLVEREAGLMPG 807
           RDANTALPLALRTVSRLVEREAGLMPG
Sbjct: 781 RDANTALPLALRTVSRLVEREAGLMPG 807


>gi|117320531 nuclear factor of kappa light polypeptide gene
           enhancer in B-cells 2 isoform a [Homo sapiens]
          Length = 900

 Score = 33.5 bits (75), Expect = 0.81
 Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 468 HALLDLPCLTAVLDLQLRSAPAASERPLWDTSLRAPSCLEAFRDPQFQGLFQYLLRPKAS 527
           H  LDL C T V  L L +A    E PL   S   P    +  D   Q L Q L  P+A 
Sbjct: 731 HTPLDLTCSTKVKTLLLNAAQNTMEPPLTPPSPAGPGL--SLGDTALQNLEQLLDGPEAQ 788

Query: 528 GATERLA 534
           G+   LA
Sbjct: 789 GSWAELA 795


>gi|117320540 nuclear factor of kappa light polypeptide gene
           enhancer in B-cells 2 isoform b [Homo sapiens]
          Length = 899

 Score = 33.5 bits (75), Expect = 0.81
 Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 468 HALLDLPCLTAVLDLQLRSAPAASERPLWDTSLRAPSCLEAFRDPQFQGLFQYLLRPKAS 527
           H  LDL C T V  L L +A    E PL   S   P    +  D   Q L Q L  P+A 
Sbjct: 731 HTPLDLTCSTKVKTLLLNAAQNTMEPPLTPPSPAGPGL--SLGDTALQNLEQLLDGPEAQ 788

Query: 528 GATERLA 534
           G+   LA
Sbjct: 789 GSWAELA 795


>gi|117320527 nuclear factor of kappa light polypeptide gene
           enhancer in B-cells 2 isoform b [Homo sapiens]
          Length = 899

 Score = 33.5 bits (75), Expect = 0.81
 Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 468 HALLDLPCLTAVLDLQLRSAPAASERPLWDTSLRAPSCLEAFRDPQFQGLFQYLLRPKAS 527
           H  LDL C T V  L L +A    E PL   S   P    +  D   Q L Q L  P+A 
Sbjct: 731 HTPLDLTCSTKVKTLLLNAAQNTMEPPLTPPSPAGPGL--SLGDTALQNLEQLLDGPEAQ 788

Query: 528 GATERLA 534
           G+   LA
Sbjct: 789 GSWAELA 795


>gi|66880553 Fanconi anemia, complementation group A isoform a [Homo
           sapiens]
          Length = 1455

 Score = 33.5 bits (75), Expect = 0.81
 Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 9/140 (6%)

Query: 296 VAFEYCQRLIEQSNRRALRKGDSDLQKACLVEAVLVLDVLCRQDPSFLYRSLSCLKALHG 355
           V F   Q+L+E    R + +     Q   +V A LV+     + PS         KA  G
Sbjct: 398 VCFPEAQQLLEDWVARLMAQAFESCQLDSMVTAFLVVRQAALEGPSAFLSYADWFKASFG 457

Query: 356 RVRGDPASVRVLLPLAHFFLSHGEAAAVDSEAVYQHLFTRIPVEQFHSPMLAFEFIQFCR 415
             RG     +  L     FLS  E    +S    Q       V   H P++  ++     
Sbjct: 458 STRGYHGCSKKALVFLFTFLS--ELVPFESPRYLQ-------VHILHPPLVPGKYRSLLT 508

Query: 416 DNLHLFSGHLSTLRLSFPNL 435
           D + L    L+ L++S  N+
Sbjct: 509 DYISLAKTRLADLKVSIENM 528


>gi|239740825 PREDICTED: hypothetical protein XP_002344066 [Homo
           sapiens]
          Length = 514

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 52/183 (28%), Positives = 71/183 (38%), Gaps = 28/183 (15%)

Query: 446 LTSEFVALLPALVDAGTALEMLHALLDLPCLTAVLDLQLRSAPAASERPLWDTSLRAPSC 505
           L SE VA+L  L    T LE     +  P L  VLD +L + PA  E  L    +   + 
Sbjct: 253 LDSELVAVLAPL---DTVLESELVAVLAP-LEVVLDSELVAVPAPLEVVLDSELVAVLAP 308

Query: 506 LEAFRDPQFQGLFQYLLRPKASGATERLAPLHQLLQPMAGCARVAQCAQAVPTLLQAFFS 565
           LE   D +   +   L     S     LAPL  +L      A +A     + + L A  +
Sbjct: 309 LEVVLDSELVAVLALLDTVLDSELVAVLAPLEVVLDSEL-VAVLAPLEVVLESELVAVLA 367

Query: 566 AVTQVADGSLINQLALLLLGRSDSLYPAPGYAAGVHSVLSSQFLAL-----CTLKPSLVV 620
            +  V D  L+  LALL                   +VL S+ +A+      TL P LV 
Sbjct: 368 PLESVLDSELVAVLALL------------------DTVLDSELVAVLAPLEVTLDPELVT 409

Query: 621 ELA 623
            LA
Sbjct: 410 VLA 412


>gi|4507691 transformation/transcription domain-associated protein
            [Homo sapiens]
          Length = 3830

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 21/141 (14%)

Query: 120  LAQGDRNEEVRAVGQGVLRALESRQPEGPSLRHLLPVMAKVVVLSPGT-LQEDQATLLSK 178
            L +  R E V  + + +   LE R+    + RHL   + +VV +SP   L ED  + LS 
Sbjct: 3507 LTESRREERVLQLLRLLNPCLEKRKET--TKRHLFFTVPRVVAVSPQMRLVEDNPSSLS- 3563

Query: 179  RLVDWLRYASLQQGLPHSGGFFSTPRARQPGPVTEVDGAVATDFFTVLSSGHRFTDDQWL 238
             LV+  +    ++G+ H              P++     +AT       + H+   D   
Sbjct: 3564 -LVEIYKQRCAKKGIEHDN------------PISRYYDRLATVQARGTQASHQVLRDILK 3610

Query: 239  NVQAF----SMLRAWLLHSGP 255
             VQ+     SML+ W LH+ P
Sbjct: 3611 EVQSNMVPRSMLKEWALHTFP 3631


>gi|4758532 ral guanine nucleotide dissociation stimulator-like 2
           [Homo sapiens]
          Length = 777

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 39/153 (25%), Positives = 55/153 (35%), Gaps = 22/153 (14%)

Query: 80  EQLQVLCAAILREMSPSDSLSLAWDHTQNSRQLSLVASVLLAQGDRNEEVRAVGQGVLRA 139
           EQL +L A +   + PS  L   W H        L  SV       N+   AV   VL A
Sbjct: 249 EQLTLLDAELFLNLIPSQCLGGLWGHRDRPGHSHLCPSVRATVTQFNKVAGAVVSSVLGA 308

Query: 140 LESRQPEGP-SLRHLLPVMAKVVVLSPGTLQEDQATLLSKRLVDWLRYASLQQGLPHSGG 198
             + +  G  ++R L P                +A LL K    W+R A   + L +   
Sbjct: 309 TSTGEGPGEVTIRPLRP--------------PQRARLLEK----WIRVAEECRLLRNFSS 350

Query: 199 FFSTPRARQPGPVTEVD---GAVATDFFTVLSS 228
            ++   A Q  P+  +    G    D   V SS
Sbjct: 351 VYAVVSALQSSPIHRLRAAWGEATRDSLRVFSS 383


>gi|199560438 hypothetical protein LOC283643 isoform 2 [Homo
           sapiens]
          Length = 393

 Score = 30.4 bits (67), Expect = 6.8
 Identities = 43/162 (26%), Positives = 62/162 (38%), Gaps = 31/162 (19%)

Query: 39  PDTLDSL-QRLFLIISATKYSRRLEKTCVDLLQATLGLPACPEQLQVLCAAILREMSPSD 97
           P+   +L Q LF ++S       L    +++    +    C +    L  A L E     
Sbjct: 47  PEATSALWQLLFRVLSPLPAGNALASLALEVQARLVKSALCSQGYPRLALAQLPE----- 101

Query: 98  SLSLAWDHTQNSRQLSLVASVLLAQGDRNEEVRAVGQGVL---------RALESRQPEGP 148
                 D +Q SR+L L  S LLA+G   E++ A  +  L          AL S  P  P
Sbjct: 102 ------DGSQGSRELLLALSWLLARGPVPEQMLAQARVPLGDEMTVCQCEALASPGPPAP 155

Query: 149 SLRHLLPVMAKVVVLSPGTL----------QEDQATLLSKRL 180
            +    PV  + V    G L          Q++Q  LLSK L
Sbjct: 156 HMEAEGPVDVRHVQWLMGKLRFRWRQLVSSQQEQCALLSKLL 197


>gi|239740775 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 454

 Score = 30.0 bits (66), Expect = 8.9
 Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 11/191 (5%)

Query: 446 LTSEFVALLPALVDAGTALEMLHALLDLPCLTAVLDLQLRSAPAASERPLWDTSLRAPSC 505
           L SE VA+L  L +     E++  L+ L     VLD +L + PA  E  L    +  P+ 
Sbjct: 178 LDSELVAVLAPL-EGVLDSELVTVLIPLD---TVLDSELVAVPAPLEVVLDSELVAVPAP 233

Query: 506 LEAFRDPQFQGLFQYLLRPKASGATERLAPLHQLLQPMAGCARVAQCAQAVPTLLQAFFS 565
           LE   D +   +   L     S      APL  +L      A +A     + + L A  +
Sbjct: 234 LEGVLDSELVAVLAPLEVVLDSELVAVPAPLEVVLDSEL-VAVLAPLEVVLDSELVAVLA 292

Query: 566 AVTQVADGSLINQLALLLLGRSDSLYPAPGYAAGVHSVLSSQFLALCTLKPSLVVELARD 625
            +  V D  L+  LA L +     L       A +  VL S+ +A+  L P L V L  +
Sbjct: 293 LLDTVLDSELVTVLAPLEVVLDSELV---AVLASLEVVLESELVAV--LAP-LEVVLESE 346

Query: 626 LLEFLGSVNGL 636
           L+  L  + G+
Sbjct: 347 LVAVLAPLEGV 357


>gi|199560536 hypothetical protein LOC283643 isoform 4 [Homo
           sapiens]
          Length = 352

 Score = 30.0 bits (66), Expect = 8.9
 Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 20/120 (16%)

Query: 81  QLQVLCAAILREMSPSDSLS-LAWDHTQNSRQLSLVASVLLAQGDRNEEVRAVGQGVL-- 137
           Q +++ +A+  +  P  +L+ L  D +Q SR+L L  S LLA+G   E++ A  +  L  
Sbjct: 37  QARLVKSALCSQGYPRLALAQLPEDGSQGSRELLLALSWLLARGPVPEQMLAQARVPLGD 96

Query: 138 -------RALESRQPEGPSLRHLLPVMAKVVVLSPGTL----------QEDQATLLSKRL 180
                   AL S  P  P +    PV  + V    G L          Q++Q  LLSK L
Sbjct: 97  EMTVCQCEALASPGPPAPHMEAEGPVDVRHVQWLMGKLRFRWRQLVSSQQEQCALLSKLL 156


>gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]
          Length = 1127

 Score = 30.0 bits (66), Expect = 8.9
 Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 5/71 (7%)

Query: 5   GAESLLHQAREIQDEELKKFCSRICKLLQAEDLGPDTLDSLQRLFLIISATKYSRRLEKT 64
           G   L H+ R I+ ++LK    +  +L   E L PD L+++++   ++   ++++ L+KT
Sbjct: 125 GLICLKHKIRNIEKKKLKLEDYKD-RLKSGEHLNPDQLEAVEKYEEVLHNLEFAKELQKT 183

Query: 65  ----CVDLLQA 71
                +DLL+A
Sbjct: 184 FSGLSLDLLKA 194


>gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens]
          Length = 1077

 Score = 30.0 bits (66), Expect = 8.9
 Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 5/71 (7%)

Query: 5   GAESLLHQAREIQDEELKKFCSRICKLLQAEDLGPDTLDSLQRLFLIISATKYSRRLEKT 64
           G   L H+ R I+ ++LK    +  +L   E L PD L+++++   ++   ++++ L+KT
Sbjct: 125 GLICLKHKIRNIEKKKLKLEDYKD-RLKSGEHLNPDQLEAVEKYEEVLHNLEFAKELQKT 183

Query: 65  ----CVDLLQA 71
                +DLL+A
Sbjct: 184 FSGLSLDLLKA 194


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.134    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,091,821
Number of Sequences: 37866
Number of extensions: 1306936
Number of successful extensions: 3317
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3313
Number of HSP's gapped (non-prelim): 17
length of query: 807
length of database: 18,247,518
effective HSP length: 110
effective length of query: 697
effective length of database: 14,082,258
effective search space: 9815333826
effective search space used: 9815333826
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.