Guide to the Human Genome
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Name: MBTPS2 Sequence: fasta or formatted (519aa) NCBI GI: 7706693
Description:

membrane-bound transcription factor peptidase, site 2

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         29           2
 C cysteine            2.3         12           2
 D aspartate           3.7         19           1
 E glutamate           2.5         13           1
 F phenylalanine       6.6         34           2
 G glycine             6.0         31           2
 H histidine           2.9         15           1
 I isoleucine          6.7         35           2
 K lysine              2.7         14           2
 L leucine            11.9         62           2
 M methionine          1.7          9           2
 N asparagine          4.2         22           2
 P proline             4.2         22           2
 Q glutamine           3.7         19           2
 R arginine            3.5         18           2
 S serine             11.2         58          23
 T threonine           5.6         29           2
 V valine             10.0         52           5
 W tryptophan          1.7          9           1
 Y tyrosine            3.3         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   membrane-bound transcription factor peptidase, site 2... 
KCNMA1                0.022   large conductance calcium-activated potassium chann...
KCNMA1                0.022   large conductance calcium-activated potassium chann...
KCNMA1                0.022   large conductance calcium-activated potassium channe...
KCNMA1                0.022   large conductance calcium-activated potassium channe...
TNRC18                0.022   trinucleotide repeat containing 18 
LOC100133142          0.020   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.020   PREDICTED: similar to zinc finger protein 208 [Homo...
SETD1A                0.020   SET domain containing 1A 
MLLT3                 0.020   myeloid/lymphoid or mixed-lineage leukemia (trithor...
SRRM2                 0.020   splicing coactivator subunit SRm300 
DACH1                 0.019   dachshund homolog 1 isoform b 
DACH1                 0.019   dachshund homolog 1 isoform a 
DACH1                 0.019   dachshund homolog 1 isoform c 
NFE2L1                0.018   nuclear factor erythroid 2-like 1 
ZBTB4                 0.017   zinc finger and BTB domain containing 4 
ZBTB4                 0.017   zinc finger and BTB domain containing 4 
RLIM                  0.016   ring finger protein, LIM domain interacting 
RLIM                  0.016   ring finger protein, LIM domain interacting 
CHD9                  0.016   chromodomain helicase DNA binding protein 9 
ARL6IP4               0.016   SRp25 nuclear protein isoform 4 
ARL6IP4               0.016   SRp25 nuclear protein isoform 3 
ARL6IP4               0.016   SRp25 nuclear protein isoform 2 
ARL6IP4               0.016   SRp25 nuclear protein isoform 1 
NRG2                  0.015   neuregulin 2 isoform 2 
NRG2                  0.015   neuregulin 2 isoform 4 
NRG2                  0.015   neuregulin 2 isoform 3 
NRG2                  0.015   neuregulin 2 isoform 1 
TMEM40                0.015   transmembrane protein 40 
PRDM2                 0.014   retinoblastoma protein-binding zinc finger protein i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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