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Search of human proteins with 7706683
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7706683 Rh family, C glycoprotein [Homo sapiens]
(479 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7706683 Rh family, C glycoprotein [Homo sapiens] 977 0.0
gi|224548945 Rhesus blood group, B glycoprotein [Homo sapiens] 512 e-145
gi|156627565 Rh-associated glycoprotein [Homo sapiens] 451 e-127
gi|20336225 Rh blood group D antigen isoform 1 [Homo sapiens] 218 7e-57
gi|66346664 Rhesus blood group, CcEe antigens isoform 1 [Homo sa... 211 9e-55
gi|189095266 Rh blood group D antigen isoform 2 [Homo sapiens] 193 3e-49
gi|66346670 Rhesus blood group, CcEe antigens isoform 2 [Homo sa... 184 2e-46
gi|66346666 Rhesus blood group, CcEe antigens isoform 3 [Homo sa... 87 3e-17
gi|66346668 Rhesus blood group, CcEe antigens isoform 4 [Homo sa... 86 7e-17
gi|14602439 Williams Beuren syndrome chromosome region 14 isofor... 33 0.57
gi|14602437 Williams Beuren syndrome chromosome region 14 isofor... 33 0.57
gi|14602435 Williams Beuren syndrome chromosome region 14 isofor... 33 0.57
gi|14602433 Williams Beuren syndrome chromosome region 14 isofor... 33 0.57
gi|45504357 surfactant associated protein G precursor [Homo sapi... 32 1.3
gi|94536864 hypothetical protein LOC138724 isoform D [Homo sapiens] 30 3.7
gi|94536862 hypothetical protein LOC138724 isoform C [Homo sapiens] 30 3.7
gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens] 30 3.7
gi|94681096 hypothetical protein LOC138724 isoform A [Homo sapiens] 30 3.7
gi|12707562 period 2 [Homo sapiens] 30 4.8
gi|19923345 RNA binding motif protein 12 [Homo sapiens] 30 4.8
gi|23510462 RNA binding motif protein 12 [Homo sapiens] 30 4.8
gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens] 30 6.3
gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens] 30 6.3
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 29 8.3
gi|40807465 zinc finger protein 341 [Homo sapiens] 29 8.3
>gi|7706683 Rh family, C glycoprotein [Homo sapiens]
Length = 479
Score = 977 bits (2525), Expect = 0.0
Identities = 479/479 (100%), Positives = 479/479 (100%)
Query: 1 MAWNTNLRWRLPLTCLLLQVIMVILFGVFVRYDFEADAHWWSERTHKNLSDMENEFYYRY 60
MAWNTNLRWRLPLTCLLLQVIMVILFGVFVRYDFEADAHWWSERTHKNLSDMENEFYYRY
Sbjct: 1 MAWNTNLRWRLPLTCLLLQVIMVILFGVFVRYDFEADAHWWSERTHKNLSDMENEFYYRY 60
Query: 61 PSFQDVHVMVFVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVV 120
PSFQDVHVMVFVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVV
Sbjct: 61 PSFQDVHVMVFVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVV 120
Query: 121 GVENLINADFCVASVCVAFGAVLGKVSPIQLLIMTFFQVTLFAVNEFILLNLLKVKDAGG 180
GVENLINADFCVASVCVAFGAVLGKVSPIQLLIMTFFQVTLFAVNEFILLNLLKVKDAGG
Sbjct: 121 GVENLINADFCVASVCVAFGAVLGKVSPIQLLIMTFFQVTLFAVNEFILLNLLKVKDAGG 180
Query: 181 SMTIHTFGAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAIS 240
SMTIHTFGAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAIS
Sbjct: 181 SMTIHTFGAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAIS 240
Query: 241 YHGDSQHRAAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMM 300
YHGDSQHRAAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMM
Sbjct: 241 YHGDSQHRAAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMM 300
Query: 301 LMPYGALIIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGIIGGIVGAVTAA 360
LMPYGALIIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGIIGGIVGAVTAA
Sbjct: 301 LMPYGALIIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGIIGGIVGAVTAA 360
Query: 361 SASLEVYGKEGLVHSFDFQGFNGDWTARTQGKFQIYGLLVTLAMALMGGIIVGLILRLPF 420
SASLEVYGKEGLVHSFDFQGFNGDWTARTQGKFQIYGLLVTLAMALMGGIIVGLILRLPF
Sbjct: 361 SASLEVYGKEGLVHSFDFQGFNGDWTARTQGKFQIYGLLVTLAMALMGGIIVGLILRLPF 420
Query: 421 WGQPSDENCFEDAVYWEMPEGNSTVYIPEDPTFKPSGPSVPSVPMVSPLPMASSVPLVP 479
WGQPSDENCFEDAVYWEMPEGNSTVYIPEDPTFKPSGPSVPSVPMVSPLPMASSVPLVP
Sbjct: 421 WGQPSDENCFEDAVYWEMPEGNSTVYIPEDPTFKPSGPSVPSVPMVSPLPMASSVPLVP 479
>gi|224548945 Rhesus blood group, B glycoprotein [Homo sapiens]
Length = 458
Score = 512 bits (1318), Expect = e-145
Identities = 248/432 (57%), Positives = 319/432 (73%), Gaps = 5/432 (1%)
Query: 8 RWRLPLTCLLLQVIMVILFGVFVRYDFEADAHWWSERTHKNLSDMENEFYYRYPSFQDVH 67
R +LPL CL LQ +LF VFVRY+ + DA W H N +NEFY+RYPSFQDVH
Sbjct: 12 RLQLPLLCLFLQGATAVLFAVFVRYNHKTDAALWHRSNHSNA---DNEFYFRYPSFQDVH 68
Query: 68 VMVFVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVVGVENLIN 127
MVFVGFGFLM FLQRYGFS+VGF FLLAAF +QW+ L+QG+ H +I VGVE++IN
Sbjct: 69 AMVFVGFGFLMVFLQRYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIHVGVESMIN 128
Query: 128 ADFCVASVCVAFGAVLGKVSPIQLLIMTFFQVTLFAVNEFILLNLLKVKDAGGSMTIHTF 187
ADFC +V ++FGAVLGK P QLL+M +V LF +NEF+LL+LL V+DAGGSMTIHTF
Sbjct: 129 ADFCAGAVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHLLGVRDAGGSMTIHTF 188
Query: 188 GAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDSQH 247
GAYFGL ++R+LYR LE+SK RQ SVY SDLFAMIGT+FLW++WPSFN+A++ G QH
Sbjct: 189 GAYFGLVLSRVLYRPQLEKSKHRQGSVYHSDLFAMIGTIFLWIFWPSFNAALTALGAGQH 248
Query: 248 RAAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYGAL 307
R A+NTY SLAA L + A+S+ + + G+LDMVHIQNA LAGGV VGT++EMML P+GAL
Sbjct: 249 RTALNTYYSLAASTLGTFALSALVGEDGRLDMVHIQNAALAGGVVVGTSSEMMLTPFGAL 308
Query: 308 IIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGIIGGIVGAVTAASASLEVY 367
GF+ G +STLG+ + TP LES+ +QDTCG++NLHG+PG++G ++G + A A+ E Y
Sbjct: 309 AAGFLAGTVSTLGYKFFTPILESKFKVQDTCGVHNLHGMPGVLGALLGVLVAGLATHEAY 368
Query: 368 GKEGLVHSFDFQGFNGDWTARTQGKFQIYGLLVTLAMALMGGIIVGLILRLPFWGQPSDE 427
G +GL F G +A +Q Q++GL VTL A +GG + GL+L+LPF P D
Sbjct: 369 G-DGLESVFPLIA-EGQRSATSQAMHQLFGLFVTLMFASVGGGLGGLLLKLPFLDSPPDS 426
Query: 428 NCFEDAVYWEMP 439
+ED V+W++P
Sbjct: 427 QHYEDQVHWQVP 438
>gi|156627565 Rh-associated glycoprotein [Homo sapiens]
Length = 409
Score = 451 bits (1159), Expect = e-127
Identities = 220/434 (50%), Positives = 298/434 (68%), Gaps = 27/434 (6%)
Query: 7 LRWRLPLTCLLLQVIMVILFGVFVRYDFEADAHWWSERTHKNLSDMENEFYYRYPSFQDV 66
+R+ PL ++L++ M++LFG+FV Y E D + +DM F+ YP FQDV
Sbjct: 1 MRFTFPLMAIVLEIAMIVLFGLFVEY--ETDQTVLEQLNITKPTDM-GIFFELYPLFQDV 57
Query: 67 HVMVFVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVVGVENLI 126
HVM+FVGFGFLMTFL++YGFS+VG N L+AA G+QW ++QG Q + +G++N+I
Sbjct: 58 HVMIFVGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIVQGILQS-QGQKFNIGIKNMI 116
Query: 127 NADFCVASVCVAFGAVLGKVSPIQLLIMTFFQVTLFAVNEFILLNLLKVKDAGGSMTIHT 186
NADF A+V ++FGAVLGK SP Q+LIMT ++ FA NE+++ + K D G SMTIH
Sbjct: 117 NADFSAATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIFKASDIGASMTIHA 176
Query: 187 FGAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDSQ 246
FGAYFGL V ILYR L + E + S Y SDLFAMIGTLFLWM+WPSFNSAI+ GD Q
Sbjct: 177 FGAYFGLAVAGILYRSGLRKGHENEESAYYSDLFAMIGTLFLWMFWPSFNSAIAEPGDKQ 236
Query: 247 HRAAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYGA 306
RA +NTY SLAACVLT+ A SS + +GKL+MVHIQNATLAGGVAVGT A+M + P+G+
Sbjct: 237 CRAIVNTYFSLAACVLTAFAFSSLVEHRGKLNMVHIQNATLAGGVAVGTCADMAIHPFGS 296
Query: 307 LIIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGIIGGIVGAVTAASASLEV 366
+IIG + G++S LG+ +LTP ++L I DTCG++NLHG+PG++GG+ G V A +
Sbjct: 297 MIIGSIAGMVSVLGYKFLTPLFTTKLRIHDTCGVHNLHGLPGVVGGLAGIVAVAMGA--- 353
Query: 367 YGKEGLVHSFDFQGFNGDWTARTQGKFQIYGLLVTLAMALMGGIIVGLILRLPFWGQPSD 426
+ T Q L ++ A++GG++ GLIL+LP WGQPSD
Sbjct: 354 --------------------SNTSMAMQAAALGSSIGTAVVGGLMTGLILKLPLWGQPSD 393
Query: 427 ENCFEDAVYWEMPE 440
+NC++D+VYW++P+
Sbjct: 394 QNCYDDSVYWKVPK 407
>gi|20336225 Rh blood group D antigen isoform 1 [Homo sapiens]
Length = 417
Score = 218 bits (556), Expect = 7e-57
Identities = 135/434 (31%), Positives = 218/434 (50%), Gaps = 30/434 (6%)
Query: 6 NLRWRLPLTCLLLQVIMVILFGVFVRYDFEADAHWWSERTHKNLSDMENEFYYRYPSFQD 65
++R LPL L L+ +++LF F YD +L D + Y QD
Sbjct: 8 SVRRCLPLWALTLEAALILLFYFFTHYD-------------ASLEDQKG-LVASYQVGQD 53
Query: 66 VHVMVFVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVVGVENL 125
+ VM +G GFL + +R+ +S+V FN + A G+QWA+L+ G+ +V+ + ++
Sbjct: 54 LTVMAAIGLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSI 113
Query: 126 INADFCVASVCVAFGAVLGKVSPIQLLIMTFFQVTLFAVNEFILLNLLKVKDAGGSMTIH 185
A SV ++ AVLGKV+ QL++M +VT ++ N+ M I+
Sbjct: 114 RLATMSALSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIY 173
Query: 186 TFGAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDS 245
F AYFGL+V L + E ++++ + L AM+G LFLWM+WPSFNSA+
Sbjct: 174 VFAAYFGLSVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIE 233
Query: 246 QHRAAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYG 305
+ A NTY ++A V+T+++ SS H +GK+ ++ +A LAGGVAVGT+ ++ P+
Sbjct: 234 RKNAVFNTYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWL 293
Query: 306 ALIIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGIIGGIVGAVTAASASLE 365
A+++G V G+IS G YL L I + + + G++G I+ V L+
Sbjct: 294 AMVLGLVAGLISVGGAKYLPGCCNRVLGIPHSSIMGYNFSLLGLLGEIIYIVLLV---LD 350
Query: 366 VYGKEGLVHSFDFQGFNGDWTARTQGKFQIYGLLVTLAMALMGGIIVGLILRLPFWGQPS 425
G G+ Q I L + + +AL G++ GL+L L W P
Sbjct: 351 TVGA-------------GNGMIGFQVLLSIGELSLAIVIALTSGLLTGLLLNLKIWKAPH 397
Query: 426 DENCFEDAVYWEMP 439
+ F+D V+W+ P
Sbjct: 398 EAKYFDDQVFWKFP 411
>gi|66346664 Rhesus blood group, CcEe antigens isoform 1 [Homo
sapiens]
Length = 417
Score = 211 bits (538), Expect = 9e-55
Identities = 133/434 (30%), Positives = 216/434 (49%), Gaps = 30/434 (6%)
Query: 6 NLRWRLPLTCLLLQVIMVILFGVFVRYDFEADAHWWSERTHKNLSDMENEFYYRYPSFQD 65
++R LPL L L+ +++LF F YD +L D + Y QD
Sbjct: 8 SVRRCLPLCALTLEAALILLFYFFTHYD-------------ASLEDQKG-LVASYQVGQD 53
Query: 66 VHVMVFVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVVGVENL 125
+ VM +G GFL + +R+ +S+V FN + A G+QWA+L+ G+ +V+ + ++
Sbjct: 54 LTVMAALGLGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSI 113
Query: 126 INADFCVASVCVAFGAVLGKVSPIQLLIMTFFQVTLFAVNEFILLNLLKVKDAGGSMTIH 185
A SV ++ GAVLGKV+ QL++M +VT ++ N+ +
Sbjct: 114 RLATMSAMSVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNIFNTDYHMNLRHFY 173
Query: 186 TFGAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDS 245
F AYFGLTV L + + +++ L AM+G LFLWM+WPS NSA+
Sbjct: 174 VFAAYFGLTVAWCLPKPLPKGTEDNDQRATIPSLSAMLGALFLWMFWPSVNSALLRSPIQ 233
Query: 246 QHRAAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYG 305
+ A NTY +LA V+T+++ SS H + K+ M ++ +A LAGGVAVGT+ ++ P+
Sbjct: 234 RKNAMFNTYYALAVSVVTAISGSSLAHPQRKISMTYVHSAVLAGGVAVGTSCHLIPSPWL 293
Query: 306 ALIIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGIIGGIVGAVTAASASLE 365
A+++G V G+IS G L L I ++++ + G++G I V
Sbjct: 294 AMVLGLVAGLISIGGAKCLPVCCNRVLGIHHISVMHSIFSLLGLLGEITYIVLL------ 347
Query: 366 VYGKEGLVHSFDFQGFNGDWTARTQGKFQIYGLLVTLAMALMGGIIVGLILRLPFWGQPS 425
++H+ +NG+ Q I L + + +AL G++ GL+L L W P
Sbjct: 348 ------VLHTV----WNGNGMIGFQVLLSIGELSLAIVIALTSGLLTGLLLNLKIWKAPH 397
Query: 426 DENCFEDAVYWEMP 439
F+D V+W+ P
Sbjct: 398 VAKYFDDQVFWKFP 411
>gi|189095266 Rh blood group D antigen isoform 2 [Homo sapiens]
Length = 321
Score = 193 bits (490), Expect = 3e-49
Identities = 111/322 (34%), Positives = 176/322 (54%), Gaps = 15/322 (4%)
Query: 6 NLRWRLPLTCLLLQVIMVILFGVFVRYDFEADAHWWSERTHKNLSDMENEFYYRYPSFQD 65
++R LPL L L+ +++LF F YD +L D + Y QD
Sbjct: 8 SVRRCLPLWALTLEAALILLFYFFTHYD-------------ASLEDQKG-LVASYQVGQD 53
Query: 66 VHVMVFVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVVGVENL 125
+ VM +G GFL + +R+ +S+V FN + A G+QWA+L+ G+ +V+ + ++
Sbjct: 54 LTVMAAIGLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSI 113
Query: 126 INADFCVASVCVAFGAVLGKVSPIQLLIMTFFQVTLFAVNEFILLNLLKVKDAGGSMTIH 185
A SV ++ AVLGKV+ QL++M +VT ++ N+ M I+
Sbjct: 114 RLATMSALSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIY 173
Query: 186 TFGAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDS 245
F AYFGL+V L + E ++++ + L AM+G LFLWM+WPSFNSA+
Sbjct: 174 VFAAYFGLSVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIE 233
Query: 246 QHRAAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYG 305
+ A NTY ++A V+T+++ SS H +GK+ ++ +A LAGGVAVGT+ ++ P+
Sbjct: 234 RKNAVFNTYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWL 293
Query: 306 ALIIGFVCGIISTLGFVYLTPF 327
A+++G V G+IS G YL PF
Sbjct: 294 AMVLGLVAGLISVGGAKYL-PF 314
>gi|66346670 Rhesus blood group, CcEe antigens isoform 2 [Homo
sapiens]
Length = 354
Score = 184 bits (466), Expect = 2e-46
Identities = 108/323 (33%), Positives = 171/323 (52%), Gaps = 14/323 (4%)
Query: 6 NLRWRLPLTCLLLQVIMVILFGVFVRYDFEADAHWWSERTHKNLSDMENEFYYRYPSFQD 65
++R LPL L L+ +++LF F YD +L D + Y QD
Sbjct: 8 SVRRCLPLCALTLEAALILLFYFFTHYD-------------ASLEDQKG-LVASYQVGQD 53
Query: 66 VHVMVFVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVVGVENL 125
+ VM +G GFL + +R+ +S+V FN + A G+QWA+L+ G+ +V+ + ++
Sbjct: 54 LTVMAALGLGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSI 113
Query: 126 INADFCVASVCVAFGAVLGKVSPIQLLIMTFFQVTLFAVNEFILLNLLKVKDAGGSMTIH 185
A SV ++ GAVLGKV+ QL++M +VT ++ N+ +
Sbjct: 114 RLATMSAMSVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNIFNTDYHMNLRHFY 173
Query: 186 TFGAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDS 245
F AYFGLTV L + + +++ L AM+G LFLWM+WPS NSA+
Sbjct: 174 VFAAYFGLTVAWCLPKPLPKGTEDNDQRATIPSLSAMLGALFLWMFWPSVNSALLRSPIQ 233
Query: 246 QHRAAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYG 305
+ A NTY +LA V+T+++ SS H + K+ M ++ +A LAGGVAVGT+ ++ P+
Sbjct: 234 RKNAMFNTYYALAVSVVTAISGSSLAHPQRKISMTYVHSAVLAGGVAVGTSCHLIPSPWL 293
Query: 306 ALIIGFVCGIISTLGFVYLTPFL 328
A+++G V G+IS G L +L
Sbjct: 294 AMVLGLVAGLISIGGAKCLPDWL 316
>gi|66346666 Rhesus blood group, CcEe antigens isoform 3 [Homo
sapiens]
Length = 266
Score = 87.4 bits (215), Expect = 3e-17
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 14/170 (8%)
Query: 6 NLRWRLPLTCLLLQVIMVILFGVFVRYDFEADAHWWSERTHKNLSDMENEFYYRYPSFQD 65
++R LPL L L+ +++LF F YD +L D + Y QD
Sbjct: 8 SVRRCLPLCALTLEAALILLFYFFTHYD-------------ASLEDQKG-LVASYQVGQD 53
Query: 66 VHVMVFVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVVGVENL 125
+ VM +G GFL + +R+ +S+V FN + A G+QWA+L+ G+ +V+ + ++
Sbjct: 54 LTVMAALGLGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSI 113
Query: 126 INADFCVASVCVAFGAVLGKVSPIQLLIMTFFQVTLFAVNEFILLNLLKV 175
A SV ++ GAVLGKV+ QL++M +VT ++ N+ V
Sbjct: 114 RLATMSAMSVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNIFNV 163
Score = 40.8 bits (94), Expect = 0.003
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 381 FNGDWTARTQGKFQIYGLLVTLAMALMGGIIVGLILRLPFWGQPSDENCFEDAVYWEMP 439
+NG+ Q I L + + +AL G++ GL+L L W P F+D V+W+ P
Sbjct: 202 WNGNGMIGFQVLLSIGELSLAIVIALTSGLLTGLLLNLKIWKAPHVAKYFDDQVFWKFP 260
>gi|66346668 Rhesus blood group, CcEe antigens isoform 4 [Homo
sapiens]
Length = 267
Score = 85.9 bits (211), Expect = 7e-17
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 14/167 (8%)
Query: 6 NLRWRLPLTCLLLQVIMVILFGVFVRYDFEADAHWWSERTHKNLSDMENEFYYRYPSFQD 65
++R LPL L L+ +++LF F YD +L D + Y QD
Sbjct: 8 SVRRCLPLCALTLEAALILLFYFFTHYD-------------ASLEDQKG-LVASYQVGQD 53
Query: 66 VHVMVFVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVVGVENL 125
+ VM +G GFL + +R+ +S+V FN + A G+QWA+L+ G+ +V+ + ++
Sbjct: 54 LTVMAALGLGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSI 113
Query: 126 INADFCVASVCVAFGAVLGKVSPIQLLIMTFFQVTLFAVNEFILLNL 172
A SV ++ GAVLGKV+ QL++M +VT ++ N+
Sbjct: 114 RLATMSAMSVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNI 160
Score = 45.1 bits (105), Expect = 1e-04
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 281 HIQNATLAGGVAVGTAAEMMLMPYGALIIGFVCGIISTLGFVYLTPFLESRLHIQDTCGI 340
++ +A LAGGVAVGT+ ++ P+ A+++G V G+IS G L L I +
Sbjct: 164 YVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLVAGLISIGGAKCLPVCCNRVLGIHHISVM 223
Query: 341 NNLHGIPGIIGGI 353
+++ + G++G I
Sbjct: 224 HSIFSLLGLLGEI 236
>gi|14602439 Williams Beuren syndrome chromosome region 14 isoform
delta [Homo sapiens]
Length = 831
Score = 33.1 bits (74), Expect = 0.57
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 439 PEGNSTVYIPEDPTFKPSGP--SVPSVPMVSPLPMASSVPLVP 479
P T + E+P F P P +VP P VSPLP ++ P P
Sbjct: 417 PMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLPAPAAFPPTP 459
>gi|14602437 Williams Beuren syndrome chromosome region 14 isoform
gamma [Homo sapiens]
Length = 850
Score = 33.1 bits (74), Expect = 0.57
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 439 PEGNSTVYIPEDPTFKPSGP--SVPSVPMVSPLPMASSVPLVP 479
P T + E+P F P P +VP P VSPLP ++ P P
Sbjct: 417 PMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLPAPAAFPPTP 459
>gi|14602435 Williams Beuren syndrome chromosome region 14 isoform
beta [Homo sapiens]
Length = 833
Score = 33.1 bits (74), Expect = 0.57
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 439 PEGNSTVYIPEDPTFKPSGP--SVPSVPMVSPLPMASSVPLVP 479
P T + E+P F P P +VP P VSPLP ++ P P
Sbjct: 417 PMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLPAPAAFPPTP 459
>gi|14602433 Williams Beuren syndrome chromosome region 14 isoform
alpha [Homo sapiens]
Length = 852
Score = 33.1 bits (74), Expect = 0.57
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 439 PEGNSTVYIPEDPTFKPSGP--SVPSVPMVSPLPMASSVPLVP 479
P T + E+P F P P +VP P VSPLP ++ P P
Sbjct: 417 PMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLPAPAAFPPTP 459
>gi|45504357 surfactant associated protein G precursor [Homo
sapiens]
Length = 78
Score = 32.0 bits (71), Expect = 1.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 212 NSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDSQHRAAINT 253
NS Y+S ++ L L ++ PS S +H SQH NT
Sbjct: 37 NSSYESSFLELLEKLCLLLHLPSGTSVTLHHARSQHHVVCNT 78
>gi|94536864 hypothetical protein LOC138724 isoform D [Homo sapiens]
Length = 1031
Score = 30.4 bits (67), Expect = 3.7
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 436 WEMPEGNSTVYIPEDPTFKPSGPSVPSVPMVSPLPM 471
W+ + +++P DP S PS+PSVP++ L M
Sbjct: 405 WKGMQSRENIWVPADPV---SPPSLPSVPLLESLVM 437
>gi|94536862 hypothetical protein LOC138724 isoform C [Homo sapiens]
Length = 1006
Score = 30.4 bits (67), Expect = 3.7
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 436 WEMPEGNSTVYIPEDPTFKPSGPSVPSVPMVSPLPM 471
W+ + +++P DP S PS+PSVP++ L M
Sbjct: 380 WKGMQSRENIWVPADPV---SPPSLPSVPLLESLVM 412
>gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens]
Length = 1044
Score = 30.4 bits (67), Expect = 3.7
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 436 WEMPEGNSTVYIPEDPTFKPSGPSVPSVPMVSPLPM 471
W+ + +++P DP S PS+PSVP++ L M
Sbjct: 418 WKGMQSRENIWVPADPV---SPPSLPSVPLLESLVM 450
>gi|94681096 hypothetical protein LOC138724 isoform A [Homo sapiens]
Length = 1079
Score = 30.4 bits (67), Expect = 3.7
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 436 WEMPEGNSTVYIPEDPTFKPSGPSVPSVPMVSPLPM 471
W+ + +++P DP S PS+PSVP++ L M
Sbjct: 453 WKGMQSRENIWVPADPV---SPPSLPSVPLLESLVM 485
>gi|12707562 period 2 [Homo sapiens]
Length = 1255
Score = 30.0 bits (66), Expect = 4.8
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 442 NSTVYIPEDPTFKPSGPSVPSVPMVSPLPMASSVPLVP 479
N+T + P D S S P+VP +P+P A S+P+ P
Sbjct: 827 NATAWSPSDT----SQSSCPAVPFPAPVPAAYSLPVFP 860
>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 30.0 bits (66), Expect = 4.8
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 447 IPEDPTFKPSGPSVPSVPMVSPLPMASSVPLVP 479
IP P+ P PS+P +P+ P+P VP VP
Sbjct: 193 IPAMPSLPPM-PSIPPIPVPPPVPTLPPVPPVP 224
Score = 29.6 bits (65), Expect = 6.3
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 443 STVYIPEDPTFKPSGPSVPSVPMVSPLPMASSVPLVP 479
+TV P P P+ PS+P +P + P+P+ VP +P
Sbjct: 183 NTVPPPPIPPI-PAMPSLPPMPSIPPIPVPPPVPTLP 218
>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 30.0 bits (66), Expect = 4.8
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 447 IPEDPTFKPSGPSVPSVPMVSPLPMASSVPLVP 479
IP P+ P PS+P +P+ P+P VP VP
Sbjct: 193 IPAMPSLPPM-PSIPPIPVPPPVPTLPPVPPVP 224
Score = 29.6 bits (65), Expect = 6.3
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 443 STVYIPEDPTFKPSGPSVPSVPMVSPLPMASSVPLVP 479
+TV P P P+ PS+P +P + P+P+ VP +P
Sbjct: 183 NTVPPPPIPPI-PAMPSLPPMPSIPPIPVPPPVPTLP 218
>gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens]
Length = 922
Score = 29.6 bits (65), Expect = 6.3
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 431 EDAVYWEMPEGNSTVYIPEDPTFKPSGPSVPSVPMVSPLPMASSVPLV 478
ED P N T P F P G S PS P +P+P AS V +
Sbjct: 224 EDLSNPSKPIQNQTFSTPASQLFSPHG-SNPSTPAATPVPTASPVKAI 270
>gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens]
Length = 944
Score = 29.6 bits (65), Expect = 6.3
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 431 EDAVYWEMPEGNSTVYIPEDPTFKPSGPSVPSVPMVSPLPMASSVPLV 478
ED P N T P F P G S PS P +P+P AS V +
Sbjct: 246 EDLSNPSKPIQNQTFSTPASQLFSPHG-SNPSTPAATPVPTASPVKAI 292
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 29.3 bits (64), Expect = 8.3
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 442 NSTVYIPEDPTFKPSGPSV-PSVPMVSP 468
+S Y P+ PT+ PS PS PS P SP
Sbjct: 1807 SSPRYTPQSPTYTPSSPSYSPSSPSYSP 1834
>gi|40807465 zinc finger protein 341 [Homo sapiens]
Length = 847
Score = 29.3 bits (64), Expect = 8.3
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 391 GKFQIYGLLVTLAMALMGGIIVGLILRLPFWGQPSDENCFEDAVYWEMPEGNSTVYIPED 450
G ++Y LA + G + + + P+ C E VY TVY P
Sbjct: 216 GVVEVYSAAAPLAGS--GTVEIQALGMQPYPPLEVPNQCVEPPVY-----PTPTVYSPGK 268
Query: 451 PTFKPSGPSVPSVPMVS 467
FKP GP+ P+ PM S
Sbjct: 269 QGFKPKGPN-PAAPMTS 284
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.141 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,026,778
Number of Sequences: 37866
Number of extensions: 729923
Number of successful extensions: 2822
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2741
Number of HSP's gapped (non-prelim): 81
length of query: 479
length of database: 18,247,518
effective HSP length: 106
effective length of query: 373
effective length of database: 14,233,722
effective search space: 5309178306
effective search space used: 5309178306
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.