Search of human proteins with 7706284

Search of human proteins with 7706284

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7706284 HMP19 protein [Homo sapiens]
         (171 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7706284 HMP19 protein [Homo sapiens]                               350   4e-97
gi|7657003 brain neuron cytoplasmic protein 1 [Homo sapiens]          203   7e-53
gi|91932788 brain neuron cytoplasmic protein 1 [Homo sapiens]         203   7e-53
gi|7656955 dopamine receptor D1 interacting protein [Homo sapiens]    102   1e-22
gi|189083742 neutrophil cytosolic factor 2 [Homo sapiens]              30   1.0  
gi|67189970 neutrophil cytosolic factor 2 [Homo sapiens]               30   1.0  
gi|225543118 solute carrier organic anion transporter family, me...    29   2.3  
gi|225543114 solute carrier organic anion transporter family, me...    29   2.3  
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]    28   3.0  
gi|58331246 glutamate decarboxylase 1 isoform GAD67 [Homo sapiens]     28   5.0  
gi|150378498 fragile site-associated protein [Homo sapiens]            28   5.0  
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]       27   6.6  
gi|65506328 protein phosphatase 1J (PP2C domain containing) [Hom...    27   6.6  
gi|118572606 hemicentin 1 [Homo sapiens]                               27   8.6  
gi|163937854 ataxin 7-like 1 isoform 1 [Homo sapiens]                  27   8.6  
gi|211971080 ataxin 7-like 1 isoform 3 [Homo sapiens]                  27   8.6  
gi|32967599 ankyrin 3 isoform 2 [Homo sapiens]                         27   8.6  
gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]                         27   8.6  
gi|44681484 cell division cycle associated 2 [Homo sapiens]            27   8.6  

>gi|7706284 HMP19 protein [Homo sapiens]
          Length = 171

 Score =  350 bits (897), Expect = 4e-97
 Identities = 171/171 (100%), Positives = 171/171 (100%)

Query: 1   MVKLNSNPSEKGTKPPSVEDGFQTVPLITPLEVNHLQLPAPEKVIVKTRTEYQPEQKNKG 60
           MVKLNSNPSEKGTKPPSVEDGFQTVPLITPLEVNHLQLPAPEKVIVKTRTEYQPEQKNKG
Sbjct: 1   MVKLNSNPSEKGTKPPSVEDGFQTVPLITPLEVNHLQLPAPEKVIVKTRTEYQPEQKNKG 60

Query: 61  KFRVPKIAEFTVTILVSLALAFLACIVFLVVYKAFTYDHSCPEGFVYKHKRCIPASLDAY 120
           KFRVPKIAEFTVTILVSLALAFLACIVFLVVYKAFTYDHSCPEGFVYKHKRCIPASLDAY
Sbjct: 61  KFRVPKIAEFTVTILVSLALAFLACIVFLVVYKAFTYDHSCPEGFVYKHKRCIPASLDAY 120

Query: 121 YSSQDPNSRSRFYTVISHYSVAKQSTARAIGPWLSAAAVIHEPKPPKTQGH 171
           YSSQDPNSRSRFYTVISHYSVAKQSTARAIGPWLSAAAVIHEPKPPKTQGH
Sbjct: 121 YSSQDPNSRSRFYTVISHYSVAKQSTARAIGPWLSAAAVIHEPKPPKTQGH 171


>gi|7657003 brain neuron cytoplasmic protein 1 [Homo sapiens]
          Length = 185

 Score =  203 bits (516), Expect = 7e-53
 Identities = 96/167 (57%), Positives = 128/167 (76%), Gaps = 13/167 (7%)

Query: 1   MVKLNSNPSEKGTKPPSVEDGFQTVPLITPLEVNHLQLPAPEKVIVKTRTEYQPEQKNKG 60
           MVKL +N +EKGTK P +EDGF T+PL+TPL+VN LQ P P+KV+VKT+TEY+P++K KG
Sbjct: 1   MVKLGNNFAEKGTKQPLLEDGFDTIPLMTPLDVNQLQFPPPDKVVVKTKTEYEPDRK-KG 59

Query: 61  KFRVPKIAEFTVTI------------LVSLALAFLACIVFLVVYKAFTYDHSCPEGFVYK 108
           K R P+IAEFTV+I            LV  ALAFL C+VFLVVYK + YD +CP+GFV K
Sbjct: 60  KARPPQIAEFTVSITEGVTERFKVSVLVLFALAFLTCVVFLVVYKVYKYDRACPDGFVLK 119

Query: 109 HKRCIPASLDAYYSSQDPNSRSRFYTVISHYSVAKQSTARAIGPWLS 155
           + +CIP  L++YY+ QD ++R +FYTVI+HY++AKQS  R++ PW+S
Sbjct: 120 NTQCIPEGLESYYAEQDSSAREKFYTVINHYNLAKQSITRSVSPWMS 166


>gi|91932788 brain neuron cytoplasmic protein 1 [Homo sapiens]
          Length = 185

 Score =  203 bits (516), Expect = 7e-53
 Identities = 96/167 (57%), Positives = 128/167 (76%), Gaps = 13/167 (7%)

Query: 1   MVKLNSNPSEKGTKPPSVEDGFQTVPLITPLEVNHLQLPAPEKVIVKTRTEYQPEQKNKG 60
           MVKL +N +EKGTK P +EDGF T+PL+TPL+VN LQ P P+KV+VKT+TEY+P++K KG
Sbjct: 1   MVKLGNNFAEKGTKQPLLEDGFDTIPLMTPLDVNQLQFPPPDKVVVKTKTEYEPDRK-KG 59

Query: 61  KFRVPKIAEFTVTI------------LVSLALAFLACIVFLVVYKAFTYDHSCPEGFVYK 108
           K R P+IAEFTV+I            LV  ALAFL C+VFLVVYK + YD +CP+GFV K
Sbjct: 60  KARPPQIAEFTVSITEGVTERFKVSVLVLFALAFLTCVVFLVVYKVYKYDRACPDGFVLK 119

Query: 109 HKRCIPASLDAYYSSQDPNSRSRFYTVISHYSVAKQSTARAIGPWLS 155
           + +CIP  L++YY+ QD ++R +FYTVI+HY++AKQS  R++ PW+S
Sbjct: 120 NTQCIPEGLESYYAEQDSSAREKFYTVINHYNLAKQSITRSVSPWMS 166


>gi|7656955 dopamine receptor D1 interacting protein [Homo sapiens]
          Length = 217

 Score =  102 bits (255), Expect = 1e-22
 Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 16/183 (8%)

Query: 1   MVKLNSNPSEKGTKPPSVEDG--FQTVPLITPLEVNHLQLPAPEKVIVKTRTEYQ---PE 55
           MVKL  + S K  K P  +DG    +VPLI+PL+++ LQ P P++V++KT+TEYQ   P+
Sbjct: 1   MVKLGCSFSGKPGKDPGDQDGAAMDSVPLISPLDISQLQPPLPDQVVIKTQTEYQLSSPD 60

Query: 56  QKNKGKFRVPKI--------AEFTVTILVSLALAFLACIVFLVVYKAFTYDH-SCPEGFV 106
           Q+N       ++               +++ A+A L C+  L++YKA  YD  +CP+GF+
Sbjct: 61  QQNFPDLEGQRLNCSHPEEGRRLPTARMIAFAMALLGCV--LIMYKAIWYDQFTCPDGFL 118

Query: 107 YKHKRCIPASLDAYYSSQDPNSRSRFYTVISHYSVAKQSTARAIGPWLSAAAVIHEPKPP 166
            +HK C P +L+ YY+  DP         I  Y ++++        W        E +  
Sbjct: 119 LRHKICTPLTLEMYYTEMDPERHRSILAAIGAYPLSRKHGTETPAAWGDGYRAAKEERKG 178

Query: 167 KTQ 169
            TQ
Sbjct: 179 PTQ 181


>gi|189083742 neutrophil cytosolic factor 2 [Homo sapiens]
          Length = 526

 Score = 30.0 bits (66), Expect = 1.0
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 5/53 (9%)

Query: 103 EGFVYKHKRCIPASLDAYYSSQDPNSRSRF-----YTVISHYSVAKQSTARAI 150
           EG +   K+    +LDA+ + QDP+SR  F     YT++ + + A+++  R+I
Sbjct: 12  EGVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSI 64


>gi|67189970 neutrophil cytosolic factor 2 [Homo sapiens]
          Length = 526

 Score = 30.0 bits (66), Expect = 1.0
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 5/53 (9%)

Query: 103 EGFVYKHKRCIPASLDAYYSSQDPNSRSRF-----YTVISHYSVAKQSTARAI 150
           EG +   K+    +LDA+ + QDP+SR  F     YT++ + + A+++  R+I
Sbjct: 12  EGVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSI 64


>gi|225543118 solute carrier organic anion transporter family,
           member 1C1 isoform 1 [Homo sapiens]
          Length = 730

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 42  EKVIVKTRTEYQPEQKNKGKFRVPK 66
           EK+  KT+  Y  E+KN G +++PK
Sbjct: 700 EKLCFKTQKFYNQERKNNGVYKIPK 724


>gi|225543114 solute carrier organic anion transporter family,
           member 1C1 isoform 4 [Homo sapiens]
          Length = 612

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 42  EKVIVKTRTEYQPEQKNKGKFRVPK 66
           EK+  KT+  Y  E+KN G +++PK
Sbjct: 582 EKLCFKTQKFYNQERKNNGVYKIPK 606


>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
          Length = 1462

 Score = 28.5 bits (62), Expect = 3.0
 Identities = 13/19 (68%), Positives = 15/19 (78%)

Query: 122  SSQDPNSRSRFYTVISHYS 140
            SS DP+SRSR YT  S+YS
Sbjct: 1391 SSYDPHSRSRSYTYDSYYS 1409


>gi|58331246 glutamate decarboxylase 1 isoform GAD67 [Homo sapiens]
          Length = 594

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 45  IVKTRTEYQPEQKNKGKFRVPKIAEFT 71
           I+  R +Y PE K KG   VPK+  FT
Sbjct: 260 IMAARYKYFPEVKTKGMAAVPKLVLFT 286


>gi|150378498 fragile site-associated protein [Homo sapiens]
          Length = 5005

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 19/95 (20%)

Query: 2    VKLNSNPSEKGTKP---PSVEDGFQTVPLITPLEVNHLQLPAPEKVIVKTRTEYQPEQKN 58
            V L S P E    P     +E   +T+P ITP+E N+              T    + ++
Sbjct: 3967 VALQSLPEEMVISPCLLDFLEKALETIP-ITPVERNY--------------TAVSSQDED 4011

Query: 59   KGKFRVPKIAEFTVTILVSLAL-AFLACIVFLVVY 92
             G F +P   E + T LVS +  A+ +  V +VVY
Sbjct: 4012 MGHFEIPDPMEESTTSLVSSSTSAYSSFPVDVVVY 4046


>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
          Length = 1243

 Score = 27.3 bits (59), Expect = 6.6
 Identities = 15/66 (22%), Positives = 29/66 (43%)

Query: 4    LNSNPSEKGTKPPSVEDGFQTVPLITPLEVNHLQLPAPEKVIVKTRTEYQPEQKNKGKFR 63
            L+ +P      PP+      ++PL  P+     + P+P    V++     P +   G+ R
Sbjct: 942  LSPSPGLLSQSPPAPPSPLPSLPLPPPVAPGGQESPSPHTAEVESEASPPPARPLPGEAR 1001

Query: 64   VPKIAE 69
            +  I+E
Sbjct: 1002 LAPISE 1007


>gi|65506328 protein phosphatase 1J (PP2C domain containing) [Homo
           sapiens]
          Length = 505

 Score = 27.3 bits (59), Expect = 6.6
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 10/79 (12%)

Query: 82  FLACIVFLVVYKAFTYDHSCPE--------GFVYKHKRC-IPASLDAYYSSQDPNSRSRF 132
           FL+C   + VY    Y+H CP+        G       C + A++D   S+ +PN  SR+
Sbjct: 400 FLSCFPEVRVYDLTQYEH-CPDDVLVLGTDGLWDVTTDCEVAATVDRVLSAYEPNDHSRY 458

Query: 133 YTVISHYSVAKQSTARAIG 151
             +     +  + T R  G
Sbjct: 459 TALAQALVLGARGTPRDRG 477


>gi|118572606 hemicentin 1 [Homo sapiens]
          Length = 5635

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 8    PSEKGTKPPSVEDGFQTVPLITPLEVNHLQLPAPEKVIVKTRT 50
            P E  + PP +    +   LI+P    H  LP+    I +TRT
Sbjct: 1100 PCEVKSLPPPIITWAKETQLISPFSPRHTFLPSGSMKITETRT 1142


>gi|163937854 ataxin 7-like 1 isoform 1 [Homo sapiens]
          Length = 861

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 13/44 (29%), Positives = 23/44 (52%)

Query: 2   VKLNSNPSEKGTKPPSVEDGFQTVPLITPLEVNHLQLPAPEKVI 45
           VK+NS  +   +   +      T PLI P+ ++    P+PEK++
Sbjct: 215 VKMNSTTTTAVSASSTSSSAVSTPPLIKPVLMSKSVPPSPEKIL 258


>gi|211971080 ataxin 7-like 1 isoform 3 [Homo sapiens]
          Length = 738

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 13/44 (29%), Positives = 23/44 (52%)

Query: 2   VKLNSNPSEKGTKPPSVEDGFQTVPLITPLEVNHLQLPAPEKVI 45
           VK+NS  +   +   +      T PLI P+ ++    P+PEK++
Sbjct: 91  VKMNSTTTTAVSASSTSSSAVSTPPLIKPVLMSKSVPPSPEKIL 134


>gi|32967599 ankyrin 3 isoform 2 [Homo sapiens]
          Length = 1001

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 126 PNSRSRFYTVISHYSVAKQSTARAIGPWLSAAAVIHEPKPP 166
           P ++++ Y   S   V KQST   + P +  +  + EP  P
Sbjct: 883 PEAKTKSYFPESQNDVGKQSTKETLKPKIHGSGHVEEPASP 923


>gi|32967601 ankyrin 3 isoform 1 [Homo sapiens]
          Length = 4377

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 126  PNSRSRFYTVISHYSVAKQSTARAIGPWLSAAAVIHEPKPP 166
            P ++++ Y   S   V KQST   + P +  +  + EP  P
Sbjct: 4259 PEAKTKSYFPESQNDVGKQSTKETLKPKIHGSGHVEEPASP 4299


>gi|44681484 cell division cycle associated 2 [Homo sapiens]
          Length = 1023

 Score = 26.9 bits (58), Expect = 8.6
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 4   LNSNPSEKGTKPPSVEDGFQTVPLITPLEVNHLQLPAPEKVIVK---TRTEYQPEQKNKG 60
           L  +P  +    P  +D  + +  I PL+V+   L +P K  +    + T+      N  
Sbjct: 434 LEQSPVPEPLPQPDFDDKGENLENIEPLQVSFAVLSSPNKSSISETLSGTDTFSSSNNHE 493

Query: 61  KFRVPKIAEFTVT 73
           K   PK+   T T
Sbjct: 494 KISSPKVGRITRT 506


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,185,847
Number of Sequences: 37866
Number of extensions: 297088
Number of successful extensions: 782
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 761
Number of HSP's gapped (non-prelim): 21
length of query: 171
length of database: 18,247,518
effective HSP length: 95
effective length of query: 76
effective length of database: 14,650,248
effective search space: 1113418848
effective search space used: 1113418848
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.