Guide to the Human Genome
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Name: LACTB2 Sequence: fasta or formatted (288aa) NCBI GI: 7705793
Description:

lactamase, beta 2

Referenced in:

Additional Enzymes and Related Sequences

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         13           2
 C cysteine            1.7          5           1
 D aspartate           4.9         14           2
 E glutamate           8.3         24           3
 F phenylalanine       2.4          7           1
 G glycine             6.9         20           2
 H histidine           4.2         12           1
 I isoleucine          9.0         26           2
 K lysine              7.3         21           2
 L leucine            10.4         30           3
 M methionine          2.1          6           1
 N asparagine          5.9         17           2
 P proline             4.2         12           1
 Q glutamine           3.8         11           2
 R arginine            4.5         13           2
 S serine              3.1          9           1
 T threonine           6.9         20           2
 V valine              5.2         15           2
 W tryptophan          0.7          2           1
 Y tyrosine            3.8         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lactamase, beta 2 
ETHE1                 0.046   ETHE1 protein 
PNKD                  0.046   myofibrillogenesis regulator 1 isoform 2 
PNKD                  0.046   myofibrillogenesis regulator 1 isoform 1 
MBLAC2                0.044   beta-lactamase-like 
HAGHL                 0.027   hydroxyacylglutathione hydrolase-like isoform 1 [Hom...
HAGHL                 0.027   hydroxyacylglutathione hydrolase-like isoform 2 [Hom...
MBLAC1                0.023   metallo-beta-lactamase domain containing 1 
HAGH                  0.021   hydroxyacylglutathione hydrolase isoform 2 
HAGH                  0.021   hydroxyacylglutathione hydrolase isoform 1 
SIRPD                 0.012   signal-regulatory protein delta 
RALBP1                0.011   ralA binding protein 1 
SPRYD5                0.007   SPRY domain containing 5 
RLF                   0.007   rearranged L-myc fusion 
FEM1B                 0.005   fem-1 homolog b 
PPTC7                 0.005   T-cell activation protein phosphatase 2C 
CENPE                 0.005   centromere protein E 
ABCA9                 0.005   ATP-binding cassette, sub-family A, member 9 
RPL24                 0.005   ribosomal protein L24 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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