Guide to the Human Genome
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Name: TRMT112 Sequence: fasta or formatted (125aa) NCBI GI: 7705477
Description:

tRNA methyltransferase 11-2 homolog

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0          5           2
 C cysteine            1.6          2           1
 D aspartate           0.8          1           1
 E glutamate          13.6         17           3
 F phenylalanine       4.8          6           1
 G glycine             6.4          8           1
 H histidine           3.2          4           2
 I isoleucine          4.8          6           1
 K lysine              2.4          3           1
 L leucine            12.8         16           3
 M methionine          4.0          5           1
 N asparagine          4.8          6           1
 P proline             7.2          9           1
 Q glutamine           2.4          3           1
 R arginine            7.2          9           1
 S serine              6.4          8           2
 T threonine           4.0          5           1
 V valine              8.0         10           1
 W tryptophan          0.8          1           1
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tRNA methyltransferase 11-2 homolog 
LOC391358             0.908   PREDICTED: similar to CG12975 
LOC391358             0.908   PREDICTED: similar to CG12975 
LOC391358             0.908   PREDICTED: similar to CG12975 
LOC100132229          0.018   PREDICTED: hypothetical protein 
LOC100132229          0.018   PREDICTED: UPF0607 protein ENSP00000382826-like [Ho...
LOC100132229          0.018   PREDICTED: UPF0607 protein ENSP00000382826-like [Ho...
ZNF860                0.018   zinc finger protein 860 
SMG5                  0.009   SMG5 homolog nonsense mediated mRNA decay factor [H...
C11orf2               0.004   chromosome 11 open reading frame2 
TTC30A                0.004   tetratricopeptide repeat domain 30A 
CFDP1                 0.004   craniofacial development protein 1 
C10orf67              0.004   hypothetical protein LOC256815 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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