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Search of human proteins with 14042943
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14042943 TatD DNase domain containing 1 isoform a [Homo
sapiens]
(297 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14042943 TatD DNase domain containing 1 isoform a [Homo sapiens] 613 e-176
gi|225903439 TatD DNase domain containing 1 isoform b [Homo sapi... 520 e-148
gi|225903424 TatD DNase domain containing 2 [Homo sapiens] 69 4e-12
gi|110349730 TatD DNase domain containing 3 isoform 1 [Homo sapi... 69 4e-12
gi|110349734 TatD DNase domain containing 3 isoform 2 [Homo sapi... 66 4e-11
gi|226061853 TatD DNase domain containing 3 isoform 5 [Homo sapi... 64 2e-10
gi|226061595 TatD DNase domain containing 3 isoform 3 [Homo sapi... 61 1e-09
gi|226061614 TatD DNase domain containing 3 isoform 4 [Homo sapi... 48 1e-05
gi|157671947 hypothetical protein LOC79974 isoform 2 [Homo sapiens] 30 3.3
gi|157671945 hypothetical protein LOC79974 isoform 1 [Homo sapiens] 30 3.3
gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens] 29 4.4
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens] 29 4.4
gi|145309330 zinc finger protein 792 [Homo sapiens] 29 4.4
gi|4507157 sortilin-related receptor containing LDLR class A rep... 28 7.4
>gi|14042943 TatD DNase domain containing 1 isoform a [Homo sapiens]
Length = 297
Score = 613 bits (1582), Expect = e-176
Identities = 297/297 (100%), Positives = 297/297 (100%)
Query: 1 MSRFKFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDA 60
MSRFKFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDA
Sbjct: 1 MSRFKFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDA 60
Query: 61 LHLAQTNGMFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRL 120
LHLAQTNGMFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRL
Sbjct: 61 LHLAQTNGMFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRL 120
Query: 121 QFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMKRNRDRCVGGVVHSFDGTK 180
QFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMKRNRDRCVGGVVHSFDGTK
Sbjct: 121 QFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMKRNRDRCVGGVVHSFDGTK 180
Query: 181 EAAAALIDLDLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRT 240
EAAAALIDLDLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRT
Sbjct: 181 EAAAALIDLDLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRT 240
Query: 241 AFPTKKKWESGHCLKDRNEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKVFFPGI 297
AFPTKKKWESGHCLKDRNEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKVFFPGI
Sbjct: 241 AFPTKKKWESGHCLKDRNEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKVFFPGI 297
>gi|225903439 TatD DNase domain containing 1 isoform b [Homo
sapiens]
Length = 250
Score = 520 bits (1339), Expect = e-148
Identities = 250/250 (100%), Positives = 250/250 (100%)
Query: 48 MITGGNLQDSKDALHLAQTNGMFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKV 107
MITGGNLQDSKDALHLAQTNGMFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKV
Sbjct: 1 MITGGNLQDSKDALHLAQTNGMFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKV 60
Query: 108 VAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMKRNRDR 167
VAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMKRNRDR
Sbjct: 61 VAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMKRNRDR 120
Query: 168 CVGGVVHSFDGTKEAAAALIDLDLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCG 227
CVGGVVHSFDGTKEAAAALIDLDLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCG
Sbjct: 121 CVGGVVHSFDGTKEAAAALIDLDLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCG 180
Query: 228 VKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQILEIMSAVRDEDPLELANTLYN 287
VKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQILEIMSAVRDEDPLELANTLYN
Sbjct: 181 VKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQILEIMSAVRDEDPLELANTLYN 240
Query: 288 NTIKVFFPGI 297
NTIKVFFPGI
Sbjct: 241 NTIKVFFPGI 250
>gi|225903424 TatD DNase domain containing 2 [Homo sapiens]
Length = 761
Score = 69.3 bits (168), Expect = 4e-12
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 69 MFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQ 128
+ + GCHP + ++ L+ L + K VA GE GLD+ P Q
Sbjct: 556 LVWGAFGCHPHFARYYSESQERNLLQALRH------PKAVAFGEMGLDYSYKCTTPVPEQ 609
Query: 129 LKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMKRNRDRCVGGVVHSFDGTKEAAAALID 188
K FE+Q +L+ K P+ +HCR + + L+IMK+ H F G+ L+
Sbjct: 610 HKVFERQLQLAVSLKKPLVIHCREADEDLLEIMKKFVPPDYKIHRHCFTGSYPVIEPLLK 669
Query: 189 L--DLYIGFNGCSLKTEA--NLEVLKSIPSEKLMIETDAPW 225
++ +GF + A E L+ IP E++++ETDAP+
Sbjct: 670 YFPNMSVGFTAVLTYSSAWEAREALRQIPLERIIVETDAPY 710
>gi|110349730 TatD DNase domain containing 3 isoform 1 [Homo
sapiens]
Length = 274
Score = 69.3 bits (168), Expect = 4e-12
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 36/271 (13%)
Query: 31 DLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLAQT-NGMFFSTVGCHPTRCGEFEKNNP 89
DL DV+ +A + V + + + + + L++ NG +G HP + G ++
Sbjct: 23 DLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPVQ-GLPPEDQR 81
Query: 90 DLYLKEL---LNLAENNKGKVVAIGECGLDFDRLQFC----PKDTQLKYFEKQFELSEQT 142
+ LK+L L + EN K +++AIGE GLDF +F K+ Q + +Q +L+++
Sbjct: 82 SVTLKDLDVALPIIENYKDRLLAIGEVGLDFSP-RFAGTGEQKEEQRQVLIRQIQLAKRL 140
Query: 143 KLPMFLHCRNSHAEFLDIMKRNRDRCVGGVVHSFDGTKEAAAALIDLDLYIGFNGCSLKT 202
LP+ +H R++ +++++ V ++H+FDG A + + +++
Sbjct: 141 NLPVNVHSRSAGRPTINLLQEQGAEKV--LLHAFDGRPSVAMEGVRAGYFFSIPPSIIRS 198
Query: 203 EANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCH 262
+++K +P + +ETD+P G P K+ RNEP +
Sbjct: 199 GQKQKLVKQLPLTSICLETDSPALG---------------PEKQV---------RNEPWN 234
Query: 263 IIQILEIMSAVRDEDPLELANTLYNNTIKVF 293
I E ++ V+ E+ N +K+F
Sbjct: 235 ISISAEYIAQVKGISVEEVIEVTTQNALKLF 265
>gi|110349734 TatD DNase domain containing 3 isoform 2 [Homo
sapiens]
Length = 273
Score = 65.9 bits (159), Expect = 4e-11
Identities = 64/271 (23%), Positives = 122/271 (45%), Gaps = 37/271 (13%)
Query: 31 DLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLAQT-NGMFFSTVGCHPTRCGEFEKNNP 89
DL DV+ +A + V + + + + + L++ NG +G HP + G ++
Sbjct: 23 DLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPVQ-GLPPEDQR 81
Query: 90 DLYLKEL---LNLAENNKGKVVAIGECGLDFDRLQFC----PKDTQLKYFEKQFELSEQT 142
+ LK+L L + EN K +++AIGE GLDF +F K+ Q + +Q +L+++
Sbjct: 82 SVTLKDLDVALPIIENYKDRLLAIGEVGLDFSP-RFAGTGEQKEEQRQVLIRQIQLAKRL 140
Query: 143 KLPMFLHCRNSHAEFLDIMKRNRDRCVGGVVHSFDGTKEAAAALIDLDLYIGFNGCSLKT 202
LP+ +H R++ +++++ V ++H+FDG A + + S+
Sbjct: 141 NLPVNVHSRSAGRPTINLLQEQGAEKV--LLHAFDGRPSVAMEGVRAGYFFSIPP-SIIR 197
Query: 203 EANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCH 262
+++K +P + +ETD+P G P K+ RNEP +
Sbjct: 198 SGQQKLVKQLPLTSICLETDSPALG---------------PEKQV---------RNEPWN 233
Query: 263 IIQILEIMSAVRDEDPLELANTLYNNTIKVF 293
I E ++ V+ E+ N +K+F
Sbjct: 234 ISISAEYIAQVKGISVEEVIEVTTQNALKLF 264
>gi|226061853 TatD DNase domain containing 3 isoform 5 [Homo
sapiens]
Length = 281
Score = 63.5 bits (153), Expect = 2e-10
Identities = 64/278 (23%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 31 DLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLAQT-NGMFFSTVGCHPTRCGEFEKNNP 89
DL DV+ +A + V + + + + + L++ NG +G HP + G ++
Sbjct: 23 DLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPVQ-GLPPEDQR 81
Query: 90 DLYLKEL---LNLAENNKGKVVAIGECGLDFDRLQFC----PKDTQLKYFEKQFELSEQT 142
+ LK+L L + EN K +++AIGE GLDF +F K+ Q + +Q +L+++
Sbjct: 82 SVTLKDLDVALPIIENYKDRLLAIGEVGLDFSP-RFAGTGEQKEEQRQVLIRQIQLAKRL 140
Query: 143 KLPMFLHCRNSHAEFLDIMKRNRDRCVGGVVHSFDGTKEAAAALIDLDLYIGFNGCSLKT 202
LP+ +H R++ +++++ V ++H+FDG A + + +++
Sbjct: 141 NLPVNVHSRSAGRPTINLLQEQGAEKV--LLHAFDGRPSVAMEGVRAGYFFSIPPSIIRS 198
Query: 203 EANL-------EVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLK 255
L +++K +P + +ETD+P G P K+
Sbjct: 199 GQLLSLFSKKQKLVKQLPLTSICLETDSPALG---------------PEKQV-------- 235
Query: 256 DRNEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKVF 293
RNEP +I E ++ V+ E+ N +K+F
Sbjct: 236 -RNEPWNISISAEYIAQVKGISVEEVIEVTTQNALKLF 272
>gi|226061595 TatD DNase domain containing 3 isoform 3 [Homo
sapiens]
Length = 240
Score = 61.2 bits (147), Expect = 1e-09
Identities = 51/212 (24%), Positives = 103/212 (48%), Gaps = 19/212 (8%)
Query: 31 DLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLAQT-NGMFFSTVGCHPTRCGEFEKNNP 89
DL DV+ +A + V + + + + + L++ NG +G HP + G ++
Sbjct: 23 DLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPVQ-GLPPEDQR 81
Query: 90 DLYLKEL---LNLAENNKGKVVAIGECGLDFDRLQFC----PKDTQLKYFEKQFELSEQT 142
+ LK+L L + EN K +++AIGE GLDF +F K+ Q + +Q +L+++
Sbjct: 82 SVTLKDLDVALPIIENYKDRLLAIGEVGLDFSP-RFAGTGEQKEEQRQVLIRQIQLAKRL 140
Query: 143 KLPMFLHCRNSHAEFLDIMKRNRDRCVGGVVHSFDGTKEAAAALIDLDLYIGFNGCSLKT 202
LP+ +H R++ +++++ V ++H+FDG A + + +++
Sbjct: 141 NLPVNVHSRSAGRPTINLLQEQGAEKV--LLHAFDGRPSVAMEGVRAGYFFSIPPSIIRS 198
Query: 203 EANL-------EVLKSIPSEKLMIETDAPWCG 227
L +++K +P + +ETD+P G
Sbjct: 199 GQLLSLFSKKQKLVKQLPLTSICLETDSPALG 230
>gi|226061614 TatD DNase domain containing 3 isoform 4 [Homo
sapiens]
Length = 253
Score = 47.8 bits (112), Expect = 1e-05
Identities = 53/264 (20%), Positives = 109/264 (41%), Gaps = 43/264 (16%)
Query: 31 DLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLAQT-NGMFFSTVGCHPTRCGEFEKNNP 89
DL DV+ +A + V + + + + + L++ NG +G HP + G ++
Sbjct: 23 DLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPVQ-GLPPEDQR 81
Query: 90 DLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLH 149
+ LK L+ + G GE K+ Q + +Q +L+++ LP+ +H
Sbjct: 82 SVTLKVGLDFSPRFAGT----GE-----------QKEEQRQVLIRQIQLAKRLNLPVNVH 126
Query: 150 CRNSHAEFLDIMKRNRDRCVGGVVHSFDGTKEAAAALIDLDLYIGFNGCSLKTEANLEVL 209
R++ +++++ V ++H+FDG A + + +++ +++
Sbjct: 127 SRSAGRPTINLLQEQGAEKV--LLHAFDGRPSVAMEGVRAGYFFSIPPSIIRSGQKQKLV 184
Query: 210 KSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQILEI 269
K +P + +ETD+P G P K+ RNEP +I E
Sbjct: 185 KQLPLTSICLETDSPALG---------------PEKQV---------RNEPWNISISAEY 220
Query: 270 MSAVRDEDPLELANTLYNNTIKVF 293
++ V+ E+ N +K+F
Sbjct: 221 IAQVKGISVEEVIEVTTQNALKLF 244
>gi|157671947 hypothetical protein LOC79974 isoform 2 [Homo sapiens]
Length = 783
Score = 29.6 bits (65), Expect = 3.3
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 189 LDLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKW 248
L+++ F + KT+ + S +K + + P+ +++ A I K +
Sbjct: 506 LNVFEQFQFMNKKTQPHPLEWNSFTEDKNIEKPQVPFDAIENKKAAVPQI------KNEN 559
Query: 249 ESGHCLKDRNEPCHIIQI 266
+ HC D N PCHI QI
Sbjct: 560 KEIHCSDDENTPCHIKQI 577
>gi|157671945 hypothetical protein LOC79974 isoform 1 [Homo sapiens]
Length = 1026
Score = 29.6 bits (65), Expect = 3.3
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 189 LDLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKW 248
L+++ F + KT+ + S +K + + P+ +++ A I K +
Sbjct: 506 LNVFEQFQFMNKKTQPHPLEWNSFTEDKNIEKPQVPFDAIENKKAAVPQI------KNEN 559
Query: 249 ESGHCLKDRNEPCHIIQI 266
+ HC D N PCHI QI
Sbjct: 560 KEIHCSDDENTPCHIKQI 577
>gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens]
Length = 436
Score = 29.3 bits (64), Expect = 4.4
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 133 EKQFELSEQTKLPMFLHCRNSHAEFLDIMKRNRDRCVGGVVHSFDGTKEAAAALIDLDLY 192
E+ ++++ T + + +HC L + D G+ H +G A A L++
Sbjct: 307 EECVQITDSTLIQLSIHCPRLQVLSLSHCELITD---DGIRHLGNG----ACAHDQLEV- 358
Query: 193 IGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKK 246
I + C L T+A+LE LKS S + + D + T AG K +RT P K
Sbjct: 359 IELDNCPLITDASLEHLKSCHSLERIELYDCQ----QITRAGIKRLRTHLPNIK 408
>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
Length = 1317
Score = 29.3 bits (64), Expect = 4.4
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 99 LAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFL 158
L E + V + E DF++++ P + +L+Y E+Q + Q LP L + E L
Sbjct: 874 LLEKHDESVTDVTEVPQDFEKIK--PVEYRLQYKERQLQYLLQNHLPTLLEEKQRAFEIL 931
Query: 159 D 159
D
Sbjct: 932 D 932
>gi|145309330 zinc finger protein 792 [Homo sapiens]
Length = 632
Score = 29.3 bits (64), Expect = 4.4
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 81 CGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSE 140
CG+F + L ++++ E G GECG F R K ++ E+ +E +E
Sbjct: 427 CGKFFSHIASLIQHQIVHTGERPHG----CGECGKAFSRSSDLMKHQRVHTGERPYECNE 482
Query: 141 QTKLPMFLHCRNSH 154
KL NSH
Sbjct: 483 CGKLFSQSSSLNSH 496
>gi|4507157 sortilin-related receptor containing LDLR class A repeats
preproprotein [Homo sapiens]
Length = 2214
Score = 28.5 bits (62), Expect = 7.4
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 16/61 (26%)
Query: 149 HCRNSHAEFLDIMKRNRDRCV------GGVVHSFDGTKEAAAALIDLDLYIGFNGCSLKT 202
HC F+D + +NR +C+ G++ DG+ E AA F GCS
Sbjct: 1270 HCEPLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDAA----------FAGCSQDP 1319
Query: 203 E 203
E
Sbjct: 1320 E 1320
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,832,002
Number of Sequences: 37866
Number of extensions: 458526
Number of successful extensions: 965
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 945
Number of HSP's gapped (non-prelim): 15
length of query: 297
length of database: 18,247,518
effective HSP length: 102
effective length of query: 195
effective length of database: 14,385,186
effective search space: 2805111270
effective search space used: 2805111270
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.