Search of human proteins with 13994261

Search of human proteins with 13994261

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13994261 mitochondrial ribosomal protein L32 [Homo sapiens]
         (188 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13994261 mitochondrial ribosomal protein L32 [Homo sapiens]        394   e-110
gi|209977097 tripartite motif-containing 66 [Homo sapiens]             35   0.050
gi|189571667 zinc finger protein 696 [Homo sapiens]                    30   1.6  
gi|154426272 hypothetical protein LOC54540 [Homo sapiens]              29   2.7  
gi|23397456 IQ motif containing K [Homo sapiens]                       29   2.7  
gi|5454140 tumor susceptibility gene 101 [Homo sapiens]                28   3.6  
gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2...    28   4.7  
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1...    28   4.7  
gi|41152076 steroid-sensitive protein 1 [Homo sapiens]                 28   4.7  
gi|41152074 steroid-sensitive protein 1 [Homo sapiens]                 28   4.7  
gi|167234405 hypothetical protein LOC284325 [Homo sapiens]             28   4.7  
gi|150417973 supervillin isoform 2 [Homo sapiens]                      28   6.1  
gi|126507091 LATS, large tumor suppressor, homolog 2 [Homo sapiens]    28   6.1  
gi|120587019 zinc finger protein 318 [Homo sapiens]                    28   6.1  
gi|94966752 elongation factor Tu GTP binding domain containing 1...    28   6.1  
gi|94966754 elongation factor Tu GTP binding domain containing 1...    28   6.1  
gi|195972903 zinc finger protein 385A isoform a [Homo sapiens]         27   7.9  
gi|24308079 zinc finger protein 385A isoform c [Homo sapiens]          27   7.9  

>gi|13994261 mitochondrial ribosomal protein L32 [Homo sapiens]
          Length = 188

 Score =  394 bits (1011), Expect = e-110
 Identities = 188/188 (100%), Positives = 188/188 (100%)

Query: 1   MALAMLVLVVSPWSAARGVLRNYWERLLRKLPQSRPGFPSPPWGPALAVQGPAMFTEPAN 60
           MALAMLVLVVSPWSAARGVLRNYWERLLRKLPQSRPGFPSPPWGPALAVQGPAMFTEPAN
Sbjct: 1   MALAMLVLVVSPWSAARGVLRNYWERLLRKLPQSRPGFPSPPWGPALAVQGPAMFTEPAN 60

Query: 61  DTSGSKENSSLLDSIFWMAAPKNRRTIEVNRCRRRNPQKLIKVKNNIDVCPECGHLKQKH 120
           DTSGSKENSSLLDSIFWMAAPKNRRTIEVNRCRRRNPQKLIKVKNNIDVCPECGHLKQKH
Sbjct: 61  DTSGSKENSSLLDSIFWMAAPKNRRTIEVNRCRRRNPQKLIKVKNNIDVCPECGHLKQKH 120

Query: 121 VLCAYCYEKVCKETAEIRRQIGKQEGGPFKAPTIETVVLYTGETPSEQDQGKRIIERDRK 180
           VLCAYCYEKVCKETAEIRRQIGKQEGGPFKAPTIETVVLYTGETPSEQDQGKRIIERDRK
Sbjct: 121 VLCAYCYEKVCKETAEIRRQIGKQEGGPFKAPTIETVVLYTGETPSEQDQGKRIIERDRK 180

Query: 181 RPSWFTQN 188
           RPSWFTQN
Sbjct: 181 RPSWFTQN 188


>gi|209977097 tripartite motif-containing 66 [Homo sapiens]
          Length = 1216

 Score = 34.7 bits (78), Expect = 0.050
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 110 CPECGHLKQKHVLCAYCYEKVCKETAEIRRQIGKQEGGPF 149
           C EC   +  H+LC YC   +C    E  R      GGPF
Sbjct: 5   CSECKEKRAAHILCTYCNRWLCSSCTEEHRH-SPVPGGPF 43


>gi|189571667 zinc finger protein 696 [Homo sapiens]
          Length = 374

 Score = 29.6 bits (65), Expect = 1.6
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 6/47 (12%)

Query: 57 EPANDTSGSKENSSLLDSI------FWMAAPKNRRTIEVNRCRRRNP 97
          EP  + +G+KE+S+L++S+      F   AP   R+ EV   +   P
Sbjct: 2  EPGGEPTGAKESSTLMESLAAVKAAFLAQAPSGSRSAEVQAAQSTEP 48


>gi|154426272 hypothetical protein LOC54540 [Homo sapiens]
          Length = 789

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 20/77 (25%), Positives = 28/77 (36%), Gaps = 14/77 (18%)

Query: 36  PGFPSPPWG-------PALAVQGPAMFTEPANDTSGSKENSSLLDSIFWMAAPK------ 82
           PG P+PPW        P   V+GP     P N           L  + W+  PK      
Sbjct: 517 PGEPAPPWAEMRGPHPPWTEVRGPPPGIVPENGLVRRLNTVPNLSRVIWVKTPKPGYPSS 576

Query: 83  -NRRTIEVNRCRRRNPQ 98
               + EV  C++  P+
Sbjct: 577 EEPSSKEVPSCKQELPE 593


>gi|23397456 IQ motif containing K [Homo sapiens]
          Length = 287

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 1  MALAMLVLVVSPWSAARGVLRNYWERLLRKLPQSRPGFP 39
          ++LA   L VS W       +N WE++ ++    +P FP
Sbjct: 32 VSLASRELPVSSWQVTEPSSKNLWEQICKEYEAEQPPFP 70


>gi|5454140 tumor susceptibility gene 101 [Homo sapiens]
          Length = 390

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 20/97 (20%)

Query: 32  PQSRPGFPSPPWGPALAV-------QGPAMFTEPANDTSGSKEN------SSLLDSIFW- 77
           P   PG P PP GP  A        Q P     P+ D + S++       S++ D + W 
Sbjct: 182 PSGYPGCPYPPGGPYPATTSSQYPSQPPVTTVGPSRDGTISEDTIRASLISAVSDKLRWR 241

Query: 78  MAAPKNRRTIEVNRCRR------RNPQKLIKVKNNID 108
           M    +R   E+N  +R      +  QKL ++   +D
Sbjct: 242 MKEEMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLD 278


>gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2
           [Homo sapiens]
          Length = 1481

 Score = 28.1 bits (61), Expect = 4.7
 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 8/86 (9%)

Query: 32  PQSRPGFPSPPWGPALAVQGPAMFTEPANDTSGSKENSSLLDSIFWMAAPKNRRTIEVNR 91
           PQ+ P  P PP  PAL  Q P   ++PA     +   S+L  S        + +T  V+ 
Sbjct: 546 PQTPPLPPLPPI-PALPQQPPLPPSQPAFSQVPASSTSTLPPS-------THSKTSAVSS 597

Query: 92  CRRRNPQKLIKVKNNIDVCPECGHLK 117
                P   + VK  + V     HLK
Sbjct: 598 QANSQPPVQVSVKTQVSVTAAIPHLK 623


>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
           [Homo sapiens]
          Length = 1490

 Score = 28.1 bits (61), Expect = 4.7
 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 8/86 (9%)

Query: 32  PQSRPGFPSPPWGPALAVQGPAMFTEPANDTSGSKENSSLLDSIFWMAAPKNRRTIEVNR 91
           PQ+ P  P PP  PAL  Q P   ++PA     +   S+L  S        + +T  V+ 
Sbjct: 546 PQTPPLPPLPPI-PALPQQPPLPPSQPAFSQVPASSTSTLPPS-------THSKTSAVSS 597

Query: 92  CRRRNPQKLIKVKNNIDVCPECGHLK 117
                P   + VK  + V     HLK
Sbjct: 598 QANSQPPVQVSVKTQVSVTAAIPHLK 623


>gi|41152076 steroid-sensitive protein 1 [Homo sapiens]
          Length = 950

 Score = 28.1 bits (61), Expect = 4.7
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 26  RLLRKLPQSRPGFPSPPWGPALAVQGPAMFTEPANDTS 63
           ++LRKL  + P  P PP  P      PA  T     TS
Sbjct: 329 KVLRKLAATAPALPQPPSTPRATTLPPAPATTVTRSTS 366


>gi|41152074 steroid-sensitive protein 1 [Homo sapiens]
          Length = 950

 Score = 28.1 bits (61), Expect = 4.7
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 26  RLLRKLPQSRPGFPSPPWGPALAVQGPAMFTEPANDTS 63
           ++LRKL  + P  P PP  P      PA  T     TS
Sbjct: 329 KVLRKLAATAPALPQPPSTPRATTLPPAPATTVTRSTS 366


>gi|167234405 hypothetical protein LOC284325 [Homo sapiens]
          Length = 351

 Score = 28.1 bits (61), Expect = 4.7
 Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 6/66 (9%)

Query: 32  PQSRPGFPSPPWG------PALAVQGPAMFTEPANDTSGSKENSSLLDSIFWMAAPKNRR 85
           P      PSPPW       P L +  P   T PA       E S LL   F  A P  + 
Sbjct: 35  PLDFSALPSPPWSQQTPVPPPLPLPPPPAATGPAPRHVFGLEKSQLLKEAFDKAGPVPKG 94

Query: 86  TIEVNR 91
             +V R
Sbjct: 95  REDVKR 100


>gi|150417973 supervillin isoform 2 [Homo sapiens]
          Length = 2214

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 33  QSRPGFPSPPWGPALAVQGPAMFTE---PANDTSGSKENSSLLDSIFWMAAPKNRRTIEV 89
           +S   F  PP   AL  + PA   E   P++ T G     S+LD+   +A  ++      
Sbjct: 546 RSLSDFTGPPQLQALKYKDPASRRELELPSSKTEGPYGEISMLDTKVSVAQLRSAFLASA 605

Query: 90  NRCRR 94
           N CRR
Sbjct: 606 NACRR 610


>gi|126507091 LATS, large tumor suppressor, homolog 2 [Homo sapiens]
          Length = 1088

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 26  RLLRKLPQSRPGFPSPPWGPALAVQGPAMFTEPANDTSGSKENSSL 71
           R+LR  PQ+  G   P W PA A   PA    PA +   +KE  +L
Sbjct: 448 RVLRPEPQTAVGPSHPAWVPAPA-PAPAPAPAPAAEGLDAKEEHAL 492


>gi|120587019 zinc finger protein 318 [Homo sapiens]
          Length = 2279

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 13/24 (54%), Positives = 15/24 (62%)

Query: 32  PQSRPGFPSPPWGPALAVQGPAMF 55
           P++R G PSPP G  L   GPA F
Sbjct: 83  PRARRGSPSPPRGRRLFPPGPAGF 106


>gi|94966752 elongation factor Tu GTP binding domain containing 1
            isoform 2 [Homo sapiens]
          Length = 1069

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 148  PFKAPTIETVVLYTGETPSEQDQGKRIIERDRKRPSWFTQ 187
            PF  PT E   L+ GE    ++Q ++ +   RKR   + +
Sbjct: 1013 PFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKGLYVE 1052


>gi|94966754 elongation factor Tu GTP binding domain containing 1
            isoform 1 [Homo sapiens]
          Length = 1120

 Score = 27.7 bits (60), Expect = 6.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 148  PFKAPTIETVVLYTGETPSEQDQGKRIIERDRKRPSWFTQ 187
            PF  PT E   L+ GE    ++Q ++ +   RKR   + +
Sbjct: 1064 PFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKGLYVE 1103


>gi|195972903 zinc finger protein 385A isoform a [Homo sapiens]
          Length = 386

 Score = 27.3 bits (59), Expect = 7.9
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 3/54 (5%)

Query: 32  PQSRPGFPSPPWGPAL---AVQGPAMFTEPANDTSGSKENSSLLDSIFWMAAPK 82
           P+ +PG PSPP  P       +G      PA+   GSKE       + + A  K
Sbjct: 154 PEKQPGSPSPPSIPETGQGVTKGEGGTPAPASLPGGSKEEEEKAKRLLYCALCK 207


>gi|24308079 zinc finger protein 385A isoform c [Homo sapiens]
          Length = 366

 Score = 27.3 bits (59), Expect = 7.9
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 3/54 (5%)

Query: 32  PQSRPGFPSPPWGPAL---AVQGPAMFTEPANDTSGSKENSSLLDSIFWMAAPK 82
           P+ +PG PSPP  P       +G      PA+   GSKE       + + A  K
Sbjct: 134 PEKQPGSPSPPSIPETGQGVTKGEGGTPAPASLPGGSKEEEEKAKRLLYCALCK 187


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,344,050
Number of Sequences: 37866
Number of extensions: 409815
Number of successful extensions: 1514
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1505
Number of HSP's gapped (non-prelim): 21
length of query: 188
length of database: 18,247,518
effective HSP length: 96
effective length of query: 92
effective length of database: 14,612,382
effective search space: 1344339144
effective search space used: 1344339144
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.