Search of human proteins with 7662502

Search of human proteins with 7662502

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7662502 malignant T cell amplified sequence 1 isoform 1
[Homo sapiens]
         (181 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7662502 malignant T cell amplified sequence 1 isoform 1 [Homo...   375   e-104
gi|212276121 malignant T cell amplified sequence 1 isoform 2 [Ho...   367   e-102
gi|56699485 ligatin [Homo sapiens]                                     62   4e-10
gi|194272176 phospholipase D1 isoform b [Homo sapiens]                 29   1.9  
gi|4505873 phospholipase D1 isoform a [Homo sapiens]                   29   1.9  
gi|49574498 hypothetical protein LOC118461 isoform 2 [Homo sapiens]    29   2.5  
gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo sapi...    29   2.5  
gi|225543094 matrix metalloproteinase 1 isoform 2 [Homo sapiens]       27   7.3  
gi|4505215 matrix metalloproteinase 1 isoform 1 preproprotein [H...    27   7.3  

>gi|7662502 malignant T cell amplified sequence 1 isoform 1 [Homo
           sapiens]
          Length = 181

 Score =  375 bits (962), Expect = e-104
 Identities = 181/181 (100%), Positives = 181/181 (100%)

Query: 1   MFKKFDEKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIE 60
           MFKKFDEKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIE
Sbjct: 1   MFKKFDEKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIE 60

Query: 61  ILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPG 120
           ILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPG
Sbjct: 61  ILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPG 120

Query: 121 AKLYPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKTY 180
           AKLYPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKTY
Sbjct: 121 AKLYPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKTY 180

Query: 181 K 181
           K
Sbjct: 181 K 181


>gi|212276121 malignant T cell amplified sequence 1 isoform 2 [Homo
           sapiens]
          Length = 182

 Score =  367 bits (943), Expect = e-102
 Identities = 177/178 (99%), Positives = 178/178 (100%)

Query: 4   KFDEKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILT 63
           +FDEKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILT
Sbjct: 5   RFDEKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDPVKIVRCHEHIEILT 64

Query: 64  VNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKL 123
           VNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKL
Sbjct: 65  VNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKL 124

Query: 124 YPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKTYK 181
           YPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKTYK
Sbjct: 125 YPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKTYK 182


>gi|56699485 ligatin [Homo sapiens]
          Length = 584

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 11/179 (6%)

Query: 3   KKFDEKENVSNCIQLKTSVIKGIKNQLIEQFPGI-EPWLNQIMPKKDPVKIVRCHEH--- 58
           K F  K N +    +K S  + ++  +   FP +    +++++P K+ + IV+ + H   
Sbjct: 4   KAFRVKSNTA----IKGSDRRKLRADVTTAFPTLGTDQVSELVPGKEELNIVKLYAHKGD 59

Query: 59  -IEILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLT 117
            + +    G  + F + E   YPT+  L  YP +LP        ++ ++ GA++M PGL 
Sbjct: 60  AVTVYVSGGNPILF-ELEKNLYPTVYTLWSYPDLLPTFTTWPLVLEKLVGGADLMLPGLV 118

Query: 118 SPGAKLYPAAVDTIVAIMAEGKQHALCVGVMKMS-AEDIEKVNKGIGIENIHYLNDGLW 175
            P A L       + AI   G +  + +GV  MS AE +    KG G   +H   D LW
Sbjct: 119 MPPAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSGLKGRGFSVLHTYQDHLW 177


>gi|194272176 phospholipase D1 isoform b [Homo sapiens]
          Length = 1036

 Score = 29.3 bits (64), Expect = 1.9
 Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 9/70 (12%)

Query: 94  HQQVDKGAIKFVLSGANIMCPGLTSPGAKLYPAAVDTIVAIMAEGKQHALCVGVMKMSAE 153
           H+  D G++K V SG ++           L PAA++++ ++  + K   +    ++ S +
Sbjct: 492 HRLTDVGSVKRVTSGPSL---------GSLPPAAMESMESLRLKDKNEPVQNLPIQKSID 542

Query: 154 DIEKVNKGIG 163
           D++   KGIG
Sbjct: 543 DVDSKLKGIG 552


>gi|4505873 phospholipase D1 isoform a [Homo sapiens]
          Length = 1074

 Score = 29.3 bits (64), Expect = 1.9
 Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 9/70 (12%)

Query: 94  HQQVDKGAIKFVLSGANIMCPGLTSPGAKLYPAAVDTIVAIMAEGKQHALCVGVMKMSAE 153
           H+  D G++K V SG ++           L PAA++++ ++  + K   +    ++ S +
Sbjct: 492 HRLTDVGSVKRVTSGPSL---------GSLPPAAMESMESLRLKDKNEPVQNLPIQKSID 542

Query: 154 DIEKVNKGIG 163
           D++   KGIG
Sbjct: 543 DVDSKLKGIG 552


>gi|49574498 hypothetical protein LOC118461 isoform 2 [Homo sapiens]
          Length = 719

 Score = 28.9 bits (63), Expect = 2.5
 Identities = 14/43 (32%), Positives = 25/43 (58%)

Query: 7   EKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDP 49
           ++E VSN + L   + +   N+L ++ P  +P  + I P+KDP
Sbjct: 534 KQEPVSNGVILPNGLEESPPNELSKERPADDPTASHINPQKDP 576


>gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo
           sapiens]
          Length = 1435

 Score = 28.9 bits (63), Expect = 2.5
 Identities = 14/43 (32%), Positives = 25/43 (58%)

Query: 7   EKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMPKKDP 49
           ++E VSN + L   + +   N+L ++ P  +P  + I P+KDP
Sbjct: 534 KQEPVSNGVILPNGLEESPPNELSKERPADDPTASHINPQKDP 576


>gi|225543094 matrix metalloproteinase 1 isoform 2 [Homo sapiens]
          Length = 403

 Score = 27.3 bits (59), Expect = 7.3
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)

Query: 61  ILTVNGELLFFR----QREGPFYPTLRL 84
           I T+ GE++FF+     R  PFYP + L
Sbjct: 221 ITTIRGEVMFFKDRFYMRTNPFYPEVEL 248


>gi|4505215 matrix metalloproteinase 1 isoform 1 preproprotein [Homo
           sapiens]
          Length = 469

 Score = 27.3 bits (59), Expect = 7.3
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)

Query: 61  ILTVNGELLFFR----QREGPFYPTLRL 84
           I T+ GE++FF+     R  PFYP + L
Sbjct: 287 ITTIRGEVMFFKDRFYMRTNPFYPEVEL 314


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.140    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,896,244
Number of Sequences: 37866
Number of extensions: 284970
Number of successful extensions: 540
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 533
Number of HSP's gapped (non-prelim): 11
length of query: 181
length of database: 18,247,518
effective HSP length: 96
effective length of query: 85
effective length of database: 14,612,382
effective search space: 1242052470
effective search space used: 1242052470
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.