Guide to the Human Genome
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Name: MCTS1 Sequence: fasta or formatted (181aa) NCBI GI: 7662502
Description:

malignant T cell amplified sequence 1 isoform 1

Referenced in:

Translation Factors

Other entries for this name:
alt prot [182aa] malignant T cell amplified sequence 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0          9           2
 C cysteine            2.2          4           1
 D aspartate           3.3          6           1
 E glutamate           6.6         12           1
 F phenylalanine       4.4          8           2
 G glycine             7.2         13           1
 H histidine           3.9          7           1
 I isoleucine          9.9         18           1
 K lysine             10.5         19           2
 L leucine             8.8         16           2
 M methionine          3.9          7           1
 N asparagine          5.0          9           1
 P proline             6.1         11           1
 Q glutamine           4.4          8           2
 R arginine            2.2          4           1
 S serine              2.8          5           1
 T threonine           3.3          6           1
 V valine              6.6         12           1
 W tryptophan          1.1          2           1
 Y tyrosine            2.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   malignant T cell amplified sequence 1 isoform 1 [Homo... 
MCTS1                 0.977   malignant T cell amplified sequence 1 isoform 2 [Ho...
LGTN                  0.106   ligatin 
PLD1                  0.011   phospholipase D1 isoform b 
PLD1                  0.011   phospholipase D1 isoform a 
C10orf71              0.011   hypothetical protein LOC118461 isoform 2 
C10orf71              0.011   hypothetical protein LOC118461 isoform 1 
MMP1                  0.006   matrix metalloproteinase 1 isoform 2 
MMP1                  0.006   matrix metalloproteinase 1 isoform 1 preproprotein [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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