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Search of human proteins with 7657003
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7657003 brain neuron cytoplasmic protein 1 [Homo sapiens]
(185 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7657003 brain neuron cytoplasmic protein 1 [Homo sapiens] 371 e-103
gi|91932788 brain neuron cytoplasmic protein 1 [Homo sapiens] 371 e-103
gi|7706284 HMP19 protein [Homo sapiens] 203 8e-53
gi|7656955 dopamine receptor D1 interacting protein [Homo sapiens] 105 2e-23
gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithora... 35 0.037
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora... 35 0.037
gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithora... 33 0.18
gi|239755070 PREDICTED: similar to proprotein convertase subtili... 32 0.41
gi|239749596 PREDICTED: hypothetical protein XP_002347099 [Homo ... 32 0.41
gi|239743863 PREDICTED: hypothetical protein XP_002342982 [Homo ... 32 0.41
gi|47132553 fibronectin 1 isoform 5 preproprotein [Homo sapiens] 31 0.53
gi|47132549 fibronectin 1 isoform 6 preproprotein [Homo sapiens] 31 0.53
gi|237858656 ring finger protein 170 isoform b [Homo sapiens] 29 2.6
gi|237858654 ring finger protein 170 isoform a [Homo sapiens] 29 2.6
gi|237858650 ring finger protein 170 isoform a [Homo sapiens] 29 2.6
gi|167621456 kinase suppressor of ras 2 [Homo sapiens] 28 5.9
gi|10190748 CEGP1 protein [Homo sapiens] 27 7.7
gi|108773804 Fraser syndrome 1 [Homo sapiens] 27 7.7
>gi|7657003 brain neuron cytoplasmic protein 1 [Homo sapiens]
Length = 185
Score = 371 bits (952), Expect = e-103
Identities = 185/185 (100%), Positives = 185/185 (100%)
Query: 1 MVKLGNNFAEKGTKQPLLEDGFDTIPLMTPLDVNQLQFPPPDKVVVKTKTEYEPDRKKGK 60
MVKLGNNFAEKGTKQPLLEDGFDTIPLMTPLDVNQLQFPPPDKVVVKTKTEYEPDRKKGK
Sbjct: 1 MVKLGNNFAEKGTKQPLLEDGFDTIPLMTPLDVNQLQFPPPDKVVVKTKTEYEPDRKKGK 60
Query: 61 ARPPQIAEFTVSITEGVTERFKVSVLVLFALAFLTCVVFLVVYKVYKYDRACPDGFVLKN 120
ARPPQIAEFTVSITEGVTERFKVSVLVLFALAFLTCVVFLVVYKVYKYDRACPDGFVLKN
Sbjct: 61 ARPPQIAEFTVSITEGVTERFKVSVLVLFALAFLTCVVFLVVYKVYKYDRACPDGFVLKN 120
Query: 121 TQCIPEGLESYYAEQDSSAREKFYTVINHYNLAKQSITRSVSPWMSVLSEEKLSEQETEA 180
TQCIPEGLESYYAEQDSSAREKFYTVINHYNLAKQSITRSVSPWMSVLSEEKLSEQETEA
Sbjct: 121 TQCIPEGLESYYAEQDSSAREKFYTVINHYNLAKQSITRSVSPWMSVLSEEKLSEQETEA 180
Query: 181 AEKSA 185
AEKSA
Sbjct: 181 AEKSA 185
>gi|91932788 brain neuron cytoplasmic protein 1 [Homo sapiens]
Length = 185
Score = 371 bits (952), Expect = e-103
Identities = 185/185 (100%), Positives = 185/185 (100%)
Query: 1 MVKLGNNFAEKGTKQPLLEDGFDTIPLMTPLDVNQLQFPPPDKVVVKTKTEYEPDRKKGK 60
MVKLGNNFAEKGTKQPLLEDGFDTIPLMTPLDVNQLQFPPPDKVVVKTKTEYEPDRKKGK
Sbjct: 1 MVKLGNNFAEKGTKQPLLEDGFDTIPLMTPLDVNQLQFPPPDKVVVKTKTEYEPDRKKGK 60
Query: 61 ARPPQIAEFTVSITEGVTERFKVSVLVLFALAFLTCVVFLVVYKVYKYDRACPDGFVLKN 120
ARPPQIAEFTVSITEGVTERFKVSVLVLFALAFLTCVVFLVVYKVYKYDRACPDGFVLKN
Sbjct: 61 ARPPQIAEFTVSITEGVTERFKVSVLVLFALAFLTCVVFLVVYKVYKYDRACPDGFVLKN 120
Query: 121 TQCIPEGLESYYAEQDSSAREKFYTVINHYNLAKQSITRSVSPWMSVLSEEKLSEQETEA 180
TQCIPEGLESYYAEQDSSAREKFYTVINHYNLAKQSITRSVSPWMSVLSEEKLSEQETEA
Sbjct: 121 TQCIPEGLESYYAEQDSSAREKFYTVINHYNLAKQSITRSVSPWMSVLSEEKLSEQETEA 180
Query: 181 AEKSA 185
AEKSA
Sbjct: 181 AEKSA 185
>gi|7706284 HMP19 protein [Homo sapiens]
Length = 171
Score = 203 bits (516), Expect = 8e-53
Identities = 96/167 (57%), Positives = 128/167 (76%), Gaps = 13/167 (7%)
Query: 1 MVKLGNNFAEKGTKQPLLEDGFDTIPLMTPLDVNQLQFPPPDKVVVKTKTEYEPDRK-KG 59
MVKL +N +EKGTK P +EDGF T+PL+TPL+VN LQ P P+KV+VKT+TEY+P++K KG
Sbjct: 1 MVKLNSNPSEKGTKPPSVEDGFQTVPLITPLEVNHLQLPAPEKVIVKTRTEYQPEQKNKG 60
Query: 60 KARPPQIAEFTVSITEGVTERFKVSVLVLFALAFLTCVVFLVVYKVYKYDRACPDGFVLK 119
K R P+IAEFTV+I LV ALAFL C+VFLVVYK + YD +CP+GFV K
Sbjct: 61 KFRVPKIAEFTVTI------------LVSLALAFLACIVFLVVYKAFTYDHSCPEGFVYK 108
Query: 120 NTQCIPEGLESYYAEQDSSAREKFYTVINHYNLAKQSITRSVSPWMS 166
+ +CIP L++YY+ QD ++R +FYTVI+HY++AKQS R++ PW+S
Sbjct: 109 HKRCIPASLDAYYSSQDPNSRSRFYTVISHYSVAKQSTARAIGPWLS 155
>gi|7656955 dopamine receptor D1 interacting protein [Homo sapiens]
Length = 217
Score = 105 bits (263), Expect = 2e-23
Identities = 62/167 (37%), Positives = 92/167 (55%), Gaps = 5/167 (2%)
Query: 1 MVKLGNNFAEKGTKQPLLEDG--FDTIPLMTPLDVNQLQFPPPDKVVVKTKTEYEPDRKK 58
MVKLG +F+ K K P +DG D++PL++PLD++QLQ P PD+VV+KT+TEY+
Sbjct: 1 MVKLGCSFSGKPGKDPGDQDGAAMDSVPLISPLDISQLQPPLPDQVVIKTQTEYQLSSPD 60
Query: 59 GKARPPQIAEFTVSITEGVTERFKVSVLVLFALAFLTCVVFLVVYKVYKYDR-ACPDGFV 117
+ P + R + ++ FA+A L CV L++YK YD+ CPDGF+
Sbjct: 61 QQNFPDLEGQRLNCSHPEEGRRLPTARMIAFAMALLGCV--LIMYKAIWYDQFTCPDGFL 118
Query: 118 LKNTQCIPEGLESYYAEQDSSAREKFYTVINHYNLAKQSITRSVSPW 164
L++ C P LE YY E D I Y L+++ T + + W
Sbjct: 119 LRHKICTPLTLEMYYTEMDPERHRSILAAIGAYPLSRKHGTETPAAW 165
>gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 1 [Homo
sapiens]
Length = 1834
Score = 35.0 bits (79), Expect = 0.037
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 20/90 (22%)
Query: 10 EKGTKQPLLEDGFDTIPLMT----PLD----VNQLQFPPPDKVVVKTKTEYEPDRKKGKA 61
EKG K+ +L+D D PL P D V QL+ PPD + KTK E KGK
Sbjct: 310 EKGAKEIILDD--DECPLQIFREWPSDKGILVFQLKRRPPDHIPKKTKKHLEGKTPKGKE 367
Query: 62 R----------PPQIAEFTVSITEGVTERF 81
R PP+ + V ++ G F
Sbjct: 368 RADGSGYGSTLPPEKLPYLVELSPGRRNHF 397
>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 2 [Homo
sapiens]
Length = 1651
Score = 35.0 bits (79), Expect = 0.037
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 20/90 (22%)
Query: 10 EKGTKQPLLEDGFDTIPLMT----PLD----VNQLQFPPPDKVVVKTKTEYEPDRKKGKA 61
EKG K+ +L+D D PL P D V QL+ PPD + KTK E KGK
Sbjct: 311 EKGAKEIILDD--DECPLQIFREWPSDKGILVFQLKRRPPDHIPKKTKKHLEGKTPKGKE 368
Query: 62 R----------PPQIAEFTVSITEGVTERF 81
R PP+ + V ++ G F
Sbjct: 369 RADGSGYGSTLPPEKLPYLVELSPGRRNHF 398
>gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 3 [Homo
sapiens]
Length = 1612
Score = 32.7 bits (73), Expect = 0.18
Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Query: 10 EKGTKQPLLEDGFDTIPLMT----PLD----VNQLQFPPPDKVVVKTKTEYEPDRKKGKA 61
EKG K+ +L+D D PL P D V QL+ PPD + KTK E KGK
Sbjct: 310 EKGAKEIILDD--DECPLQIFREWPSDKGILVFQLKRRPPDHIPKKTKKHLEGKTPKGKE 367
Query: 62 R 62
R
Sbjct: 368 R 368
>gi|239755070 PREDICTED: similar to proprotein convertase
subtilisin/kexin type 5 [Homo sapiens]
Length = 853
Score = 31.6 bits (70), Expect = 0.41
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 110 RACPDGFVLKNTQCIPEGLESYYAEQDSS 138
+ CP +L NT C+ + E YYA++DS+
Sbjct: 480 QTCPMNSLLLNTTCVKDCPEGYYADEDSN 508
>gi|239749596 PREDICTED: hypothetical protein XP_002347099 [Homo
sapiens]
Length = 853
Score = 31.6 bits (70), Expect = 0.41
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 110 RACPDGFVLKNTQCIPEGLESYYAEQDSS 138
+ CP +L NT C+ + E YYA++DS+
Sbjct: 480 QTCPMNSLLLNTTCVKDCPEGYYADEDSN 508
>gi|239743863 PREDICTED: hypothetical protein XP_002342982 [Homo
sapiens]
Length = 853
Score = 31.6 bits (70), Expect = 0.41
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 110 RACPDGFVLKNTQCIPEGLESYYAEQDSS 138
+ CP +L NT C+ + E YYA++DS+
Sbjct: 480 QTCPMNSLLLNTTCVKDCPEGYYADEDSN 508
>gi|47132553 fibronectin 1 isoform 5 preproprotein [Homo sapiens]
Length = 2296
Score = 31.2 bits (69), Expect = 0.53
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 12 GTKQPLLEDGFDTIPLMTPLDVNQL-------QFPPPDKVVVKTKTEYEPDRKKGKARPP 64
G QPL++ TIP T L Q+ Q+ PP+ + + P K G +
Sbjct: 1619 GESQPLVQTAVTTIPAPTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI 1678
Query: 65 QIAEFTVSITEG---VTERFKVSVLVL 88
+A + S+ V +++VSV L
Sbjct: 1679 NLAPDSSSVVVSGLMVATKYEVSVYAL 1705
>gi|47132549 fibronectin 1 isoform 6 preproprotein [Homo sapiens]
Length = 2176
Score = 31.2 bits (69), Expect = 0.53
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 12 GTKQPLLEDGFDTIPLMTPLDVNQL-------QFPPPDKVVVKTKTEYEPDRKKGKARPP 64
G QPL++ TIP T L Q+ Q+ PP+ + + P K G +
Sbjct: 1619 GESQPLVQTAVTTIPAPTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI 1678
Query: 65 QIAEFTVSITEG---VTERFKVSVLVL 88
+A + S+ V +++VSV L
Sbjct: 1679 NLAPDSSSVVVSGLMVATKYEVSVYAL 1705
>gi|237858656 ring finger protein 170 isoform b [Homo sapiens]
Length = 200
Score = 28.9 bits (63), Expect = 2.6
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 72 SITEGVTERFKVSVLVLFALAFLTCVVFLVVYKVYKYDRACPDGFVLKNTQCIPEGLESY 131
S+ EGV+++ V+V+V FA L+ VY R +N + + E
Sbjct: 17 SVIEGVSDQVLVAVVVSFA---------LIATLVYALFRNVHQNIHPENQELVRVLREQL 67
Query: 132 YAEQDSSA--REKFYT 145
EQD+ A R++FYT
Sbjct: 68 QTEQDAPAATRQQFYT 83
>gi|237858654 ring finger protein 170 isoform a [Homo sapiens]
Length = 258
Score = 28.9 bits (63), Expect = 2.6
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 72 SITEGVTERFKVSVLVLFALAFLTCVVFLVVYKVYKYDRACPDGFVLKNTQCIPEGLESY 131
S+ EGV+++ V+V+V FA L+ VY R +N + + E
Sbjct: 17 SVIEGVSDQVLVAVVVSFA---------LIATLVYALFRNVHQNIHPENQELVRVLREQL 67
Query: 132 YAEQDSSA--REKFYT 145
EQD+ A R++FYT
Sbjct: 68 QTEQDAPAATRQQFYT 83
>gi|237858650 ring finger protein 170 isoform a [Homo sapiens]
Length = 258
Score = 28.9 bits (63), Expect = 2.6
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 72 SITEGVTERFKVSVLVLFALAFLTCVVFLVVYKVYKYDRACPDGFVLKNTQCIPEGLESY 131
S+ EGV+++ V+V+V FA L+ VY R +N + + E
Sbjct: 17 SVIEGVSDQVLVAVVVSFA---------LIATLVYALFRNVHQNIHPENQELVRVLREQL 67
Query: 132 YAEQDSSA--REKFYT 145
EQD+ A R++FYT
Sbjct: 68 QTEQDAPAATRQQFYT 83
>gi|167621456 kinase suppressor of ras 2 [Homo sapiens]
Length = 921
Score = 27.7 bits (60), Expect = 5.9
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 16 PLLEDGFDTIPLMTPLDVNQLQFPP--PDKVVVKTKTEYEPDRKKGKARPP 64
P LE G ++P +P + ++ PP P+ V T P RKK K +PP
Sbjct: 210 PPLESGHRSLP-PSPRQRHAVRTPPRTPNIVTTVTPPGTPPMRKKNKLKPP 259
>gi|10190748 CEGP1 protein [Homo sapiens]
Length = 999
Score = 27.3 bits (59), Expect = 7.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 118 LKNTQCIPEGLESYYAEQDSSAREKF 143
LKN + PEGL E+ SS +E F
Sbjct: 502 LKNAELFPEGLRPALPEKHSSVKESF 527
>gi|108773804 Fraser syndrome 1 [Homo sapiens]
Length = 4011
Score = 27.3 bits (59), Expect = 7.7
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Query: 112 CPDGFVLKNTQCIPEGLESYYAEQDS 137
C DG+VL++ C+ + L S+Y QDS
Sbjct: 976 CMDGYVLQDGACVEQCLSSFY--QDS 999
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,884,705
Number of Sequences: 37866
Number of extensions: 293497
Number of successful extensions: 913
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 890
Number of HSP's gapped (non-prelim): 29
length of query: 185
length of database: 18,247,518
effective HSP length: 96
effective length of query: 89
effective length of database: 14,612,382
effective search space: 1300501998
effective search space used: 1300501998
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.