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Search of human proteins with 74229021
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|74229021 2'-5'-oligoadenylate synthetase 2 isoform 3 [Homo
sapiens]
(172 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|74229021 2'-5'-oligoadenylate synthetase 2 isoform 3 [Homo sa... 353 5e-98
gi|74229017 2'-5'-oligoadenylate synthetase 2 isoform 2 [Homo sa... 304 3e-83
gi|74229019 2'-5'-oligoadenylate synthetase 2 isoform 1 [Homo sa... 304 3e-83
gi|74229015 2',5'-oligoadenylate synthetase 1 isoform 3 [Homo sa... 73 1e-13
gi|74229013 2',5'-oligoadenylate synthetase 1 isoform 1 [Homo sa... 73 1e-13
gi|74229011 2',5'-oligoadenylate synthetase 1 isoform 2 [Homo sa... 73 1e-13
gi|45007007 2'-5'oligoadenylate synthetase 3 [Homo sapiens] 71 5e-13
gi|38016930 2'-5'-oligoadenylate synthetase-like isoform b [Homo... 48 4e-06
gi|11321577 2'-5'-oligoadenylate synthetase-like isoform a [Homo... 48 4e-06
gi|156142186 cytokine receptor-like factor 3 [Homo sapiens] 33 0.16
gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens] 30 0.79
gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens] 30 0.79
gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens] 30 0.79
gi|33186882 testis serine protease 2 [Homo sapiens] 30 0.79
gi|50658071 phosphodiesterase 4D interacting protein isoform 5 [... 29 2.3
gi|148596957 myosin binding protein C, cardiac [Homo sapiens] 28 5.1
>gi|74229021 2'-5'-oligoadenylate synthetase 2 isoform 3 [Homo
sapiens]
Length = 172
Score = 353 bits (905), Expect = 5e-98
Identities = 172/172 (100%), Positives = 172/172 (100%)
Query: 1 MGNGESQLSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEPEQFPLVQGVAIG 60
MGNGESQLSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEPEQFPLVQGVAIG
Sbjct: 1 MGNGESQLSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEPEQFPLVQGVAIG 60
Query: 61 GSYGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEI 120
GSYGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEI
Sbjct: 61 GSYGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEI 120
Query: 121 QKSLDGFTIQVFTKNQRISFEVLAAFNALSKHCWVSGEKSQRSGCQTALCNL 172
QKSLDGFTIQVFTKNQRISFEVLAAFNALSKHCWVSGEKSQRSGCQTALCNL
Sbjct: 121 QKSLDGFTIQVFTKNQRISFEVLAAFNALSKHCWVSGEKSQRSGCQTALCNL 172
>gi|74229017 2'-5'-oligoadenylate synthetase 2 isoform 2 [Homo
sapiens]
Length = 687
Score = 304 bits (778), Expect = 3e-83
Identities = 150/150 (100%), Positives = 150/150 (100%)
Query: 1 MGNGESQLSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEPEQFPLVQGVAIG 60
MGNGESQLSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEPEQFPLVQGVAIG
Sbjct: 1 MGNGESQLSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEPEQFPLVQGVAIG 60
Query: 61 GSYGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEI 120
GSYGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEI
Sbjct: 61 GSYGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEI 120
Query: 121 QKSLDGFTIQVFTKNQRISFEVLAAFNALS 150
QKSLDGFTIQVFTKNQRISFEVLAAFNALS
Sbjct: 121 QKSLDGFTIQVFTKNQRISFEVLAAFNALS 150
Score = 63.5 bits (153), Expect = 8e-11
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Query: 8 LSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEP--EQFPLVQGVAIGGSYGR 65
L + P L FI+E+L+P + ID VN I L+E Q + GGS +
Sbjct: 340 LFTTPGHLLDKFIKEFLQPNKCFLEQIDSAVNIIRTFLKENCFRQSTAKIQIVRGGSTAK 399
Query: 66 KTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEIQKSLD 125
T L+ SD LV+F + LK + QK + I+ + ++LK W + E++ S +
Sbjct: 400 GTALKTGSDADLVVFHNSLKSYTSQKNERHKIVKEIHEQLK----AFWREKEEELEVSFE 455
Query: 126 ----------GFTIQVFTKNQRISFEVLAAFNALSK 151
F+++ N+ +SF+VL AFNAL +
Sbjct: 456 PPKWKAPRVLSFSLKSKVLNESVSFDVLPAFNALGQ 491
>gi|74229019 2'-5'-oligoadenylate synthetase 2 isoform 1 [Homo
sapiens]
Length = 719
Score = 304 bits (778), Expect = 3e-83
Identities = 150/150 (100%), Positives = 150/150 (100%)
Query: 1 MGNGESQLSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEPEQFPLVQGVAIG 60
MGNGESQLSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEPEQFPLVQGVAIG
Sbjct: 1 MGNGESQLSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEPEQFPLVQGVAIG 60
Query: 61 GSYGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEI 120
GSYGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEI
Sbjct: 61 GSYGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEI 120
Query: 121 QKSLDGFTIQVFTKNQRISFEVLAAFNALS 150
QKSLDGFTIQVFTKNQRISFEVLAAFNALS
Sbjct: 121 QKSLDGFTIQVFTKNQRISFEVLAAFNALS 150
Score = 63.5 bits (153), Expect = 8e-11
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Query: 8 LSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEP--EQFPLVQGVAIGGSYGR 65
L + P L FI+E+L+P + ID VN I L+E Q + GGS +
Sbjct: 340 LFTTPGHLLDKFIKEFLQPNKCFLEQIDSAVNIIRTFLKENCFRQSTAKIQIVRGGSTAK 399
Query: 66 KTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEIQKSLD 125
T L+ SD LV+F + LK + QK + I+ + ++LK W + E++ S +
Sbjct: 400 GTALKTGSDADLVVFHNSLKSYTSQKNERHKIVKEIHEQLK----AFWREKEEELEVSFE 455
Query: 126 ----------GFTIQVFTKNQRISFEVLAAFNALSK 151
F+++ N+ +SF+VL AFNAL +
Sbjct: 456 PPKWKAPRVLSFSLKSKVLNESVSFDVLPAFNALGQ 491
>gi|74229015 2',5'-oligoadenylate synthetase 1 isoform 3 [Homo
sapiens]
Length = 414
Score = 73.2 bits (178), Expect = 1e-13
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 8 LSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEP----EQFPL-VQGVAIGGS 62
L + PA+ L FI++YL P + I+ ++ IC L+E +P+ V V GGS
Sbjct: 4 LRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVKGGS 63
Query: 63 YGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEIQK 122
G+ T LRG SD LV+F S L FQDQ + + + + +L+ C + FE+Q
Sbjct: 64 SGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFEVQA 123
Query: 123 SLDG------FTIQVFTKNQRISFEVLAAFNALSK 151
G F + + + F+VL AF+AL +
Sbjct: 124 PRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQ 158
>gi|74229013 2',5'-oligoadenylate synthetase 1 isoform 1 [Homo
sapiens]
Length = 400
Score = 73.2 bits (178), Expect = 1e-13
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 8 LSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEP----EQFPL-VQGVAIGGS 62
L + PA+ L FI++YL P + I+ ++ IC L+E +P+ V V GGS
Sbjct: 4 LRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVKGGS 63
Query: 63 YGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEIQK 122
G+ T LRG SD LV+F S L FQDQ + + + + +L+ C + FE+Q
Sbjct: 64 SGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFEVQA 123
Query: 123 SLDG------FTIQVFTKNQRISFEVLAAFNALSK 151
G F + + + F+VL AF+AL +
Sbjct: 124 PRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQ 158
>gi|74229011 2',5'-oligoadenylate synthetase 1 isoform 2 [Homo
sapiens]
Length = 364
Score = 73.2 bits (178), Expect = 1e-13
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 8 LSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEP----EQFPL-VQGVAIGGS 62
L + PA+ L FI++YL P + I+ ++ IC L+E +P+ V V GGS
Sbjct: 4 LRNTPAKSLDKFIEDYLLPDTCFRMQINHAIDIICGFLKERCFRGSSYPVCVSKVVKGGS 63
Query: 63 YGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEIQK 122
G+ T LRG SD LV+F S L FQDQ + + + + +L+ C + FE+Q
Sbjct: 64 SGKGTTLRGRSDADLVVFLSPLTTFQDQLNRRGEFIQEIRRQLEACQRERAFSVKFEVQA 123
Query: 123 SLDG------FTIQVFTKNQRISFEVLAAFNALSK 151
G F + + + F+VL AF+AL +
Sbjct: 124 PRWGNPRALSFVLSSLQLGEGVEFDVLPAFDALGQ 158
>gi|45007007 2'-5'oligoadenylate synthetase 3 [Homo sapiens]
Length = 1087
Score = 70.9 bits (172), Expect = 5e-13
Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 10/160 (6%)
Query: 8 LSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEP--EQFPL-VQGVAIGGSYG 64
L PA L FI E+L+P + +++ V+TIC L+E P+ V V GGS
Sbjct: 747 LYQTPAGDLDKFISEFLQPNRQFLAQVNKAVDTICSFLKENCFRNSPIKVIKVVKGGSSA 806
Query: 65 RKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEIQK-- 122
+ T LRG SD LV+F S QF +Q + +I+ + +L+ C + + FE+ K
Sbjct: 807 KGTALRGRSDADLVVFLSCFSQFTEQGNKRAEIISEIRAQLEACQQERQFEVKFEVSKWE 866
Query: 123 --SLDGFTIQVFTK-NQRISFEVLAAFNALSKHCWVSGEK 159
+ F++ T +Q + F+VL AF+AL + VSG +
Sbjct: 867 NPRVLSFSLTSQTMLDQSVDFDVLPAFDALGQ--LVSGSR 904
Score = 53.5 bits (127), Expect = 9e-08
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 8 LSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEPEQFPLVQGVAIGGSYGRKT 67
LS +P ++L FIQ++LKP + Q + + ++ I L E V+ GGS+GR T
Sbjct: 408 LSQIPTKELDRFIQDHLKPSPQFQEQVKKAIDIILRCLHE-NCVHKASRVSKGGSFGRGT 466
Query: 68 VLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLK 106
LR D L++F + ++DQ + +ILD+ +L+
Sbjct: 467 DLRDGCDVELIIFLNCFTDYKDQGPRRAEILDEMRAQLE 505
Score = 43.9 bits (102), Expect = 7e-05
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 8 LSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEP-----EQFPLVQGVAIGGS 62
L S PA L F+ L+P +E + + L+E P V GGS
Sbjct: 3 LYSTPAAALDRFVARRLQPRKEFVEKARRALGALAAALRERGGRLGAAAPRVLKTVKGGS 62
Query: 63 YGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDK 100
GR T L+G D LV+F K + DQ+ + +IL +
Sbjct: 63 SGRGTALKGGCDSELVIFLDCFKSYVDQRARRAEILSE 100
>gi|38016930 2'-5'-oligoadenylate synthetase-like isoform b [Homo
sapiens]
Length = 255
Score = 48.1 bits (113), Expect = 4e-06
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 7 QLSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEP--------EQFPLVQGVA 58
+L S PA +L F+ ++L+P+ E + + + V T+ + L++ +Q V V
Sbjct: 6 ELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLKVV 65
Query: 59 IGGSYGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDIL 98
GS+G TVLR + LV F S FQ+ + +D+L
Sbjct: 66 KVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVL 105
>gi|11321577 2'-5'-oligoadenylate synthetase-like isoform a [Homo
sapiens]
Length = 514
Score = 48.1 bits (113), Expect = 4e-06
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 7 QLSSVPAQKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEP--------EQFPLVQGVA 58
+L S PA +L F+ ++L+P+ E + + + V T+ + L++ +Q V V
Sbjct: 6 ELYSTPASRLDSFVAQWLQPHREWKEEVLDAVRTVEEFLRQEHFQGKRGLDQDVRVLKVV 65
Query: 59 IGGSYGRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDIL 98
GS+G TVLR + LV F S FQ+ + +D+L
Sbjct: 66 KVGSFGNGTVLRSTREVELVAFLSCFHSFQEAAKHHKDVL 105
>gi|156142186 cytokine receptor-like factor 3 [Homo sapiens]
Length = 442
Score = 32.7 bits (73), Expect = 0.16
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 14 QKLGWFIQEYLKPYEECQTLIDEMVNTICDVLQEPE 49
Q++ QE +KP ++CQ LI+ VNT D+++E E
Sbjct: 79 QEVDTIEQETIKPLDDCQKLIEHGVNTAEDLVREGE 114
>gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens]
Length = 2725
Score = 30.4 bits (67), Expect = 0.79
Identities = 24/111 (21%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 64 GRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEIQK- 122
GRK NS TL + +L+ + + +R ++K+ +++FC + L + ++
Sbjct: 33 GRKPRQSYNSRETLHEYNQELRMNYNSQSRKRKEVEKSTQEMEFCETSHTLCSGYQTDMH 92
Query: 123 --SLDGFTIQVFTKNQRISFEVLAAFNALSKHCWVSGEKSQRSGCQTALCN 171
S G+ +++ + + + +AL W+ G KS+ S C ++ N
Sbjct: 93 SVSRHGYQLEMGSDVDTETEGAASPDHAL--RMWIRGMKSEHSSCLSSRAN 141
>gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens]
Length = 2731
Score = 30.4 bits (67), Expect = 0.79
Identities = 24/111 (21%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 64 GRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEIQK- 122
GRK NS TL + +L+ + + +R ++K+ +++FC + L + ++
Sbjct: 33 GRKPRQSYNSRETLHEYNQELRMNYNSQSRKRKEVEKSTQEMEFCETSHTLCSGYQTDMH 92
Query: 123 --SLDGFTIQVFTKNQRISFEVLAAFNALSKHCWVSGEKSQRSGCQTALCN 171
S G+ +++ + + + +AL W+ G KS+ S C ++ N
Sbjct: 93 SVSRHGYQLEMGSDVDTETEGAASPDHAL--RMWIRGMKSEHSSCLSSRAN 141
>gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens]
Length = 2732
Score = 30.4 bits (67), Expect = 0.79
Identities = 24/111 (21%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 64 GRKTVLRGNSDGTLVLFFSDLKQFQDQKRSQRDILDKTGDKLKFCLFTKWLKNNFEIQK- 122
GRK NS TL + +L+ + + +R ++K+ +++FC + L + ++
Sbjct: 33 GRKPRQSYNSRETLHEYNQELRMNYNSQSRKRKEVEKSTQEMEFCETSHTLCSGYQTDMH 92
Query: 123 --SLDGFTIQVFTKNQRISFEVLAAFNALSKHCWVSGEKSQRSGCQTALCN 171
S G+ +++ + + + +AL W+ G KS+ S C ++ N
Sbjct: 93 SVSRHGYQLEMGSDVDTETEGAASPDHAL--RMWIRGMKSEHSSCLSSRAN 141
>gi|33186882 testis serine protease 2 [Homo sapiens]
Length = 293
Score = 30.4 bits (67), Expect = 0.79
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 20 IQEYLKPYEECQTLIDEMVNTICDVLQEPEQFPLVQGVAIGGSYGRKTVLRGNSDGTLVL 79
+ +Y+ YEEC +I + +++ DV +++G+ G K +G+S G L
Sbjct: 222 VDQYIMCYEECNKIIQKALSSTKDV--------IIKGMVCGYKEQGKDSCQGDSGGRLAC 273
Query: 80 FFSD 83
++D
Sbjct: 274 EYND 277
>gi|50658071 phosphodiesterase 4D interacting protein isoform 5
[Homo sapiens]
Length = 1132
Score = 28.9 bits (63), Expect = 2.3
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 19/78 (24%)
Query: 91 KRSQRDILDKTGDKLKFCLFTKWLKNNFEIQKSLDGFTIQVFTKNQRISFEVL--AAFNA 148
+R Q+ +L+K D+LKFC+ + + KNN D ++ N + VL A ++A
Sbjct: 77 ERLQKLLLEK--DRLKFCIASMYRKNN-------DDSGAEIKAGNGTVDMSVLPDARYSA 127
Query: 149 LSK--------HCWVSGE 158
L + CWV E
Sbjct: 128 LLQEDFAYSGFECWVENE 145
>gi|148596957 myosin binding protein C, cardiac [Homo sapiens]
Length = 1274
Score = 27.7 bits (60), Expect = 5.1
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 112 KWLKNNFEIQKSLDGFTIQVFTKNQRISFEVLAAFNALSKHCWVSGEKSQRSGCQTAL 169
KWLKN EIQ S + + + ++ + + + C V GEK C T L
Sbjct: 395 KWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGGEK-----CSTEL 447
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,236,494
Number of Sequences: 37866
Number of extensions: 236059
Number of successful extensions: 598
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 568
Number of HSP's gapped (non-prelim): 20
length of query: 172
length of database: 18,247,518
effective HSP length: 95
effective length of query: 77
effective length of database: 14,650,248
effective search space: 1128069096
effective search space used: 1128069096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.