Search of human proteins with 7305303

Search of human proteins with 7305303

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7305303 NCK-associated protein 1 isoform 1 [Homo sapiens]
         (1128 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7305303 NCK-associated protein 1 isoform 1 [Homo sapiens]         2226   0.0  
gi|45545411 NCK-associated protein 1 isoform 2 [Homo sapiens]        2219   0.0  
gi|34485727 NCK-associated protein 1-like [Homo sapiens]             1378   0.0  
gi|54792740 transmembrane and coiled-coil domain family 2 [Homo ...    32   4.4  
gi|110815815 centlein isoform 1 [Homo sapiens]                         32   4.4  
gi|38788416 laminin, alpha 1 precursor [Homo sapiens]                  31   5.8  
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs...    31   5.8  
gi|14270502 protocadherin gamma subfamily B, 6 isoform 2 precurs...    31   5.8  
gi|226053185 paternally expressed 3 isoform 3 [Homo sapiens]           30   9.9  
gi|226053169 paternally expressed 3 isoform 1 [Homo sapiens]           30   9.9  
gi|226053148 paternally expressed 3 isoform 2 [Homo sapiens]           30   9.9  
gi|226053126 paternally expressed 3 isoform 1 [Homo sapiens]           30   9.9  
gi|33354285 paternally expressed 3 isoform 1 [Homo sapiens]            30   9.9  
gi|44888835 ATPase, class I, type 8B, member 3 [Homo sapiens]          30   9.9  

>gi|7305303 NCK-associated protein 1 isoform 1 [Homo sapiens]
          Length = 1128

 Score = 2226 bits (5768), Expect = 0.0
 Identities = 1128/1128 (100%), Positives = 1128/1128 (100%)

Query: 1    MSRSVLQPSQQKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFI 60
            MSRSVLQPSQQKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFI
Sbjct: 1    MSRSVLQPSQQKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFI 60

Query: 61   VRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTIDVCQVF 120
            VRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTIDVCQVF
Sbjct: 61   VRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTIDVCQVF 120

Query: 121  FDITVNFDLTKNYLDLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDREYPRLGQ 180
            FDITVNFDLTKNYLDLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDREYPRLGQ
Sbjct: 121  FDITVNFDLTKNYLDLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDREYPRLGQ 180

Query: 181  MIVDYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLSADQWRNAQLLSLISAPSTML 240
            MIVDYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLSADQWRNAQLLSLISAPSTML
Sbjct: 181  MIVDYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLSADQWRNAQLLSLISAPSTML 240

Query: 241  NPAQSDTMPCEYLSLDAMEKWIIFGFILCHGILNTDATALNLWKLALQSSSCLSLFRDEV 300
            NPAQSDTMPCEYLSLDAMEKWIIFGFILCHGILNTDATALNLWKLALQSSSCLSLFRDEV
Sbjct: 241  NPAQSDTMPCEYLSLDAMEKWIIFGFILCHGILNTDATALNLWKLALQSSSCLSLFRDEV 300

Query: 301  FHIHKAAEDLFVNIRGYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELATVLSDQ 360
            FHIHKAAEDLFVNIRGYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELATVLSDQ
Sbjct: 301  FHIHKAAEDLFVNIRGYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELATVLSDQ 360

Query: 361  PGLLGPKALFVFMALSFARDEIIWLLRHADNMPKKSADDFIDKHIAELIFYMEELRAHVR 420
            PGLLGPKALFVFMALSFARDEIIWLLRHADNMPKKSADDFIDKHIAELIFYMEELRAHVR
Sbjct: 361  PGLLGPKALFVFMALSFARDEIIWLLRHADNMPKKSADDFIDKHIAELIFYMEELRAHVR 420

Query: 421  KYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQVEDGEV 480
            KYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQVEDGEV
Sbjct: 421  KYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQVEDGEV 480

Query: 481  FDFRGMRLDWFRLQAYTSVSKASLGLADHRELGKMMNTIIFHTKMVDSLVEMLVETSDLS 540
            FDFRGMRLDWFRLQAYTSVSKASLGLADHRELGKMMNTIIFHTKMVDSLVEMLVETSDLS
Sbjct: 481  FDFRGMRLDWFRLQAYTSVSKASLGLADHRELGKMMNTIIFHTKMVDSLVEMLVETSDLS 540

Query: 541  IFCFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCTHELCPEERHHIGDRSLSLCN 600
            IFCFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCTHELCPEERHHIGDRSLSLCN
Sbjct: 541  IFCFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCTHELCPEERHHIGDRSLSLCN 600

Query: 601  MFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKQTGKKGEPEREKP 660
            MFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKQTGKKGEPEREKP
Sbjct: 601  MFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKQTGKKGEPEREKP 660

Query: 661  GVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTKSI 720
            GVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTKSI
Sbjct: 661  GVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTKSI 720

Query: 721  VGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHG 780
            VGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHG
Sbjct: 721  VGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHG 780

Query: 781  EPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLS 840
            EPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLS
Sbjct: 781  EPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLS 840

Query: 841  ELLGPYGMKFLSESLMWHISSQVAELKKLVVENVDVLTQMRTSFDKPDQMAALFKRLSSV 900
            ELLGPYGMKFLSESLMWHISSQVAELKKLVVENVDVLTQMRTSFDKPDQMAALFKRLSSV
Sbjct: 841  ELLGPYGMKFLSESLMWHISSQVAELKKLVVENVDVLTQMRTSFDKPDQMAALFKRLSSV 900

Query: 901  DSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSSIEDFKDHIPRETDMKVAMNVYE 960
            DSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSSIEDFKDHIPRETDMKVAMNVYE
Sbjct: 901  DSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSSIEDFKDHIPRETDMKVAMNVYE 960

Query: 961  LSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQYSP 1020
            LSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQYSP
Sbjct: 961  LSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQYSP 1020

Query: 1021 AIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETDKTTTRN 1080
            AIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETDKTTTRN
Sbjct: 1021 AIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETDKTTTRN 1080

Query: 1081 RESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSVTSSA 1128
            RESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSVTSSA
Sbjct: 1081 RESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSVTSSA 1128


>gi|45545411 NCK-associated protein 1 isoform 2 [Homo sapiens]
          Length = 1134

 Score = 2219 bits (5751), Expect = 0.0
 Identities = 1128/1134 (99%), Positives = 1128/1134 (99%), Gaps = 6/1134 (0%)

Query: 1    MSRSVLQPSQQKLAEKLTILNDRGVGMLTRLYNIKK------ACGDPKAKPSYLIDKNLE 54
            MSRSVLQPSQQKLAEKLTILNDRGVGMLTRLYNIKK      ACGDPKAKPSYLIDKNLE
Sbjct: 1    MSRSVLQPSQQKLAEKLTILNDRGVGMLTRLYNIKKQGQVWKACGDPKAKPSYLIDKNLE 60

Query: 55   SAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTI 114
            SAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTI
Sbjct: 61   SAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTI 120

Query: 115  DVCQVFFDITVNFDLTKNYLDLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDRE 174
            DVCQVFFDITVNFDLTKNYLDLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDRE
Sbjct: 121  DVCQVFFDITVNFDLTKNYLDLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDRE 180

Query: 175  YPRLGQMIVDYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLSADQWRNAQLLSLIS 234
            YPRLGQMIVDYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLSADQWRNAQLLSLIS
Sbjct: 181  YPRLGQMIVDYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLSADQWRNAQLLSLIS 240

Query: 235  APSTMLNPAQSDTMPCEYLSLDAMEKWIIFGFILCHGILNTDATALNLWKLALQSSSCLS 294
            APSTMLNPAQSDTMPCEYLSLDAMEKWIIFGFILCHGILNTDATALNLWKLALQSSSCLS
Sbjct: 241  APSTMLNPAQSDTMPCEYLSLDAMEKWIIFGFILCHGILNTDATALNLWKLALQSSSCLS 300

Query: 295  LFRDEVFHIHKAAEDLFVNIRGYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELA 354
            LFRDEVFHIHKAAEDLFVNIRGYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELA
Sbjct: 301  LFRDEVFHIHKAAEDLFVNIRGYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELA 360

Query: 355  TVLSDQPGLLGPKALFVFMALSFARDEIIWLLRHADNMPKKSADDFIDKHIAELIFYMEE 414
            TVLSDQPGLLGPKALFVFMALSFARDEIIWLLRHADNMPKKSADDFIDKHIAELIFYMEE
Sbjct: 361  TVLSDQPGLLGPKALFVFMALSFARDEIIWLLRHADNMPKKSADDFIDKHIAELIFYMEE 420

Query: 415  LRAHVRKYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQ 474
            LRAHVRKYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQ
Sbjct: 421  LRAHVRKYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQ 480

Query: 475  VEDGEVFDFRGMRLDWFRLQAYTSVSKASLGLADHRELGKMMNTIIFHTKMVDSLVEMLV 534
            VEDGEVFDFRGMRLDWFRLQAYTSVSKASLGLADHRELGKMMNTIIFHTKMVDSLVEMLV
Sbjct: 481  VEDGEVFDFRGMRLDWFRLQAYTSVSKASLGLADHRELGKMMNTIIFHTKMVDSLVEMLV 540

Query: 535  ETSDLSIFCFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCTHELCPEERHHIGDR 594
            ETSDLSIFCFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCTHELCPEERHHIGDR
Sbjct: 541  ETSDLSIFCFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCTHELCPEERHHIGDR 600

Query: 595  SLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKQTGKKGE 654
            SLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKQTGKKGE
Sbjct: 601  SLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKQTGKKGE 660

Query: 655  PEREKPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEI 714
            PEREKPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEI
Sbjct: 661  PEREKPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEI 720

Query: 715  RFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQ 774
            RFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQ
Sbjct: 721  RFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQ 780

Query: 775  HLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDIS 834
            HLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDIS
Sbjct: 781  HLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDIS 840

Query: 835  EMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVVENVDVLTQMRTSFDKPDQMAALF 894
            EMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVVENVDVLTQMRTSFDKPDQMAALF
Sbjct: 841  EMRSLSELLGPYGMKFLSESLMWHISSQVAELKKLVVENVDVLTQMRTSFDKPDQMAALF 900

Query: 895  KRLSSVDSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSSIEDFKDHIPRETDMKV 954
            KRLSSVDSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSSIEDFKDHIPRETDMKV
Sbjct: 901  KRLSSVDSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSSIEDFKDHIPRETDMKV 960

Query: 955  AMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNV 1014
            AMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNV
Sbjct: 961  AMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNV 1020

Query: 1015 MSQYSPAIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETD 1074
            MSQYSPAIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETD
Sbjct: 1021 MSQYSPAIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETD 1080

Query: 1075 KTTTRNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSVTSSA 1128
            KTTTRNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSVTSSA
Sbjct: 1081 KTTTRNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSVTSSA 1134


>gi|34485727 NCK-associated protein 1-like [Homo sapiens]
          Length = 1127

 Score = 1378 bits (3567), Expect = 0.0
 Identities = 664/1119 (59%), Positives = 890/1119 (79%), Gaps = 3/1119 (0%)

Query: 4    SVLQPSQQKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRK 63
            S+    Q KLAEKLTILNDRG G+L R+YNIKK C DPK+KP +L++K++E ++K+I +K
Sbjct: 2    SLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMEPSLKYINKK 61

Query: 64   FPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTIDVCQVFFDI 123
            FP ++ RN+ Q L  + +EK+EI++ L  YY +FVDVMEF+DHV ELLNTID CQ  FDI
Sbjct: 62   FPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVYELLNTIDACQCHFDI 121

Query: 124  TVNFDLTKNYLDLIITYTTLMILLSRIEERKAIIGLYNYAHEMTHGASDREYPRLGQMIV 183
             +NFD T++YLDLI+TYT++++LLSRIE+R+ +IG+YN AHEM HG  D  + RLGQM++
Sbjct: 122  NLNFDFTRSYLDLIVTYTSVILLLSRIEDRRILIGMYNCAHEMLHGHGDPSFARLGQMVL 181

Query: 184  DYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLSADQWRNAQLLSLISAPSTMLNPA 243
            +Y++PLKK+ EEF PH+K++S AL+SL  ++ RRN  A+QWR+AQLLSLIS P  M+NPA
Sbjct: 182  EYDHPLKKLTEEFGPHTKAVSGALLSLHFLFVRRNQGAEQWRSAQLLSLISNPPAMINPA 241

Query: 244  QSDTMPCEYLSLDAMEKWIIFGFILCHGILNTDATALNLWKLALQSSSCLSLFRDEVFHI 303
             SDTM CEYLS++ ME+WII GF+LCHG LN+++    LWKL LQ S  ++L R++V  +
Sbjct: 242  NSDTMACEYLSVEVMERWIIIGFLLCHGCLNSNSQCQKLWKLCLQGSLYITLIREDVLQV 301

Query: 304  HKAAEDLFVNIRGYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELATVLSDQPGL 363
            HK  EDLF +++GY KR+ DI+E KE  ++++G  H +RR+FLR A+KEL TVL+D+PGL
Sbjct: 302  HKVTEDLFSSLKGYGKRVADIKESKEHVIANSGQFHCQRRQFLRMAVKELETVLADEPGL 361

Query: 364  LGPKALFVFMALSFARDEIIWLLRHADNMPK-KSADDFIDKHIAELIFYMEELRAHVRKY 422
            LGPKALF FMALSF RDE+ WL+RH +N+ K K+ +D+ D  IAEL+F +E +R+ VR++
Sbjct: 362  LGPKALFAFMALSFIRDEVTWLVRHTENVTKTKTPEDYADSSIAELLFLLEGIRSLVRRH 421

Query: 423  GPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQVEDGEVFD 482
              V+Q+Y++QYL+ FDA+VL++++QNLSVCPE+ESIIMSSFV+ ++SL++KQV++GE F+
Sbjct: 422  IKVIQQYHLQYLARFDALVLSDIIQNLSVCPEEESIIMSSFVSILSSLNLKQVDNGEKFE 481

Query: 483  FRGMRLDWFRLQAYTSVSKASLGLADHRELGKMMNTIIFHTKMVDSLVEMLVETSDLSIF 542
            F G+RLDWFRLQAYTSV+KA L L ++ +L K+MN I+FH++M+DS+ ++LVETSDLS F
Sbjct: 482  FSGLRLDWFRLQAYTSVAKAPLHLHENPDLAKVMNLIVFHSRMLDSVEKLLVETSDLSTF 541

Query: 543  CFYSRAFEKMFQQCLELPSQSRYSIAFPLLCTHFMSCTHELCPEERHHIGDRSLSLCNMF 602
            CF+ R FEKMF   LE  +  RY+IAFPL+C HF+ CTHE+CPEE  H+ +  L  CN F
Sbjct: 542  CFHLRIFEKMFAMTLEESAMLRYAIAFPLICAHFVHCTHEMCPEEYPHLKNHGLHHCNSF 601

Query: 603  LDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKQ--TGKKGEPEREKP 660
            L+E+AKQ  N + +IC EQ  LS+QLLPKHCA TIS+A NKK++KQ  T +KGEPER+KP
Sbjct: 602  LEELAKQTSNCVLEICAEQRNLSEQLLPKHCATTISKAKNKKTRKQRQTPRKGEPERDKP 661

Query: 661  GVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEIRFTKSI 720
            G ES RKNR +VTN+DKLH  L+EL  ++N+V +  V+EHT  P EYL+SHLE R  ++I
Sbjct: 662  GAESHRKNRSIVTNMDKLHLNLTELALTMNHVYSFSVFEHTIFPSEYLSSHLEARLNRAI 721

Query: 721  VGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDSHG 780
            V +  YN  TQEI +PSELL  V+AY+  +QS+  ++  D +RV  N LLQQTQ LDS G
Sbjct: 722  VWLAGYNATTQEIVRPSELLAGVKAYIGFIQSLAQFLGADASRVIRNALLQQTQPLDSCG 781

Query: 781  EPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRSLS 840
            E TIT+LYTNWYLE+LLRQ S+G I   PAM+AFV+LP E E  F+AEE+SDISEMR+L+
Sbjct: 782  EQTITTLYTNWYLESLLRQASSGTIILSPAMQAFVSLPREGEQNFSAEEFSDISEMRALA 841

Query: 841  ELLGPYGMKFLSESLMWHISSQVAELKKLVVENVDVLTQMRTSFDKPDQMAALFKRLSSV 900
            ELLGPYGMKFLSE+LMWH++SQ+ ELKKLVVEN+D+L Q+R++F KPD MA+L  +L+  
Sbjct: 842  ELLGPYGMKFLSENLMWHVTSQIVELKKLVVENMDILVQIRSNFSKPDLMASLLPQLTGA 901

Query: 901  DSVLKRMTIIGVILSFRSLAQEALRDVLSYHIPFLVSSIEDFKDHIPRETDMKVAMNVYE 960
            ++VLKRMTIIGVILSFR++AQE LR+V S H PFL+  IE  K+ +  +TD+KV ++++E
Sbjct: 902  ENVLKRMTIIGVILSFRAMAQEGLREVFSSHCPFLMGPIECLKEFVTPDTDIKVTLSIFE 961

Query: 961  LSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSLPTLASNVMSQYSP 1020
            L+SAAG+ C+IDPALV A+++ K++  SPEEEYK+ACLL++F+AVSLP LA++  S YS 
Sbjct: 962  LASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYSI 1021

Query: 1021 AIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETDKTTTRN 1080
              +G+ NNIHCL KAI Q++AALFT++  +IE  LKEFL +AS SLL++GQETDK  TRN
Sbjct: 1022 EKDGYNNNIHCLTKAIIQVSAALFTLYNKNIETHLKEFLVVASVSLLQLGQETDKLKTRN 1081

Query: 1081 RESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAV 1119
            RES+ LL+ ++V+ES FLT+D+LESCFPYVLLRNAY  V
Sbjct: 1082 RESISLLMRLVVEESSFLTLDMLESCFPYVLLRNAYREV 1120


>gi|54792740 transmembrane and coiled-coil domain family 2 [Homo
           sapiens]
          Length = 709

 Score = 31.6 bits (70), Expect = 4.4
 Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 12/137 (8%)

Query: 11  QKLAEKLTILNDRGVGMLTRLYNIKKACGDPKAKPSYLIDKNLESAVKFIVRKFPAVETR 70
           ++L E+L  L +     +T L     +  +  A  SY   ++++ AV+  + +   +E +
Sbjct: 563 ERLEEQLNDLTELHQNEMTNLKQELASMEEKVAYQSYERARDIQEAVESCLTRVTKLELQ 622

Query: 71  NNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTIDVCQVFFDITVNFDLT 130
              QQ+ QL+  ++    N       F++V         +L  + V  VF     NF   
Sbjct: 623 QQQQQVVQLEGVEN---ANARALLGKFINV---------ILALMAVLLVFVSTIANFITP 670

Query: 131 KNYLDLIITYTTLMILL 147
                L IT TTL++L+
Sbjct: 671 LMKTRLRITSTTLLVLV 687


>gi|110815815 centlein isoform 1 [Homo sapiens]
          Length = 1406

 Score = 31.6 bits (70), Expect = 4.4
 Identities = 41/189 (21%), Positives = 77/189 (40%), Gaps = 17/189 (8%)

Query: 594  RSLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKH-CAKTISQAVNKKSKKQTGKK 652
            RS+ L    L    K A N +T   +   TL  +LL K    K + + +++  +  T K+
Sbjct: 1088 RSMDLEMKQLQYKLKNATNELTKQSSNVKTLKFELLAKEEHIKEMHEKISRMERDITMKR 1147

Query: 653  GEPE----REKPGVESMRKNRLVVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYL 708
               E    R+K  +ES +    ++ NLDK    L+E C             +     + L
Sbjct: 1148 HLIEDLKFRQKVNLESNKSFSEMLQNLDKKVKTLTEEC------------SNKKVSIDSL 1195

Query: 709  TSHLEIRFTKSIVGMTMYNQATQEIAKPSELLTSVRAYMTVLQSIENYVQIDITRVFNNV 768
               L +   +      MY ++ +E+ K    LT + + ++  +S    ++   ++    +
Sbjct: 1196 KQRLNVAVKEKSQYEQMYQKSKEELEKKDLKLTLLVSRISETESAMAEIETAASKQLQEL 1255

Query: 769  LLQQTQHLD 777
             LQ  Q L+
Sbjct: 1256 ALQSEQVLE 1264


>gi|38788416 laminin, alpha 1 precursor [Homo sapiens]
          Length = 3075

 Score = 31.2 bits (69), Expect = 5.8
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 305  KAAEDLFVNIR-GYNKRINDIRECKEAAVSHAGSMHRERRKFLRSALKELATVLSDQPGL 363
            KAAEDL   I+  Y K + ++   KEAA SH  S H    K   + ++E    + +   L
Sbjct: 1723 KAAEDLLSQIQENYQKPLEELEVLKEAA-SHVLSKHNNELKAAEALVREAEAKMQESNHL 1781

Query: 364  L 364
            L
Sbjct: 1782 L 1782


>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 930

 Score = 31.2 bits (69), Expect = 5.8
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 7/57 (12%)

Query: 939 IEDFKDHIPRETDMKVAMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKI 995
           IED  DH P+    ++ + ++E S++AG    +DPA      +    NI+  ++YKI
Sbjct: 123 IEDVNDHAPQFDKKEIHLEIFE-SASAGTRLSLDPA------TDPDININSIKDYKI 172


>gi|14270502 protocadherin gamma subfamily B, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 31.2 bits (69), Expect = 5.8
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 7/57 (12%)

Query: 939 IEDFKDHIPRETDMKVAMNVYELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKI 995
           IED  DH P+    ++ + ++E S++AG    +DPA      +    NI+  ++YKI
Sbjct: 123 IEDVNDHAPQFDKKEIHLEIFE-SASAGTRLSLDPA------TDPDININSIKDYKI 172


>gi|226053185 paternally expressed 3 isoform 3 [Homo sapiens]
          Length = 1464

 Score = 30.4 bits (67), Expect = 9.9
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 23/94 (24%)

Query: 149  RIEERKAIIGLYNYAHEMTHGASDREYPR--LGQMIVDYENPLKKMMEEFVPHS------ 200
            ++  RK ++    Y H + H  S  EY R   G+ +  YE P  K  E F+  S      
Sbjct: 1003 KVHSRKCLVDSREYTHSVIHTHSISEYQRDYTGEQL--YECP--KCGESFIHSSFLFEHQ 1058

Query: 201  -----------KSLSDALISLQMVYPRRNLSADQ 223
                       K   D  I+L  + PRRN +A++
Sbjct: 1059 RIHEQDQLYSMKGCDDGFIALLPMKPRRNRAAER 1092


>gi|226053169 paternally expressed 3 isoform 1 [Homo sapiens]
          Length = 1588

 Score = 30.4 bits (67), Expect = 9.9
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 23/94 (24%)

Query: 149  RIEERKAIIGLYNYAHEMTHGASDREYPR--LGQMIVDYENPLKKMMEEFVPHS------ 200
            ++  RK ++    Y H + H  S  EY R   G+ +  YE P  K  E F+  S      
Sbjct: 1127 KVHSRKCLVDSREYTHSVIHTHSISEYQRDYTGEQL--YECP--KCGESFIHSSFLFEHQ 1182

Query: 201  -----------KSLSDALISLQMVYPRRNLSADQ 223
                       K   D  I+L  + PRRN +A++
Sbjct: 1183 RIHEQDQLYSMKGCDDGFIALLPMKPRRNRAAER 1216


>gi|226053148 paternally expressed 3 isoform 2 [Homo sapiens]
          Length = 1462

 Score = 30.4 bits (67), Expect = 9.9
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 23/94 (24%)

Query: 149  RIEERKAIIGLYNYAHEMTHGASDREYPR--LGQMIVDYENPLKKMMEEFVPHS------ 200
            ++  RK ++    Y H + H  S  EY R   G+ +  YE P  K  E F+  S      
Sbjct: 1001 KVHSRKCLVDSREYTHSVIHTHSISEYQRDYTGEQL--YECP--KCGESFIHSSFLFEHQ 1056

Query: 201  -----------KSLSDALISLQMVYPRRNLSADQ 223
                       K   D  I+L  + PRRN +A++
Sbjct: 1057 RIHEQDQLYSMKGCDDGFIALLPMKPRRNRAAER 1090


>gi|226053126 paternally expressed 3 isoform 1 [Homo sapiens]
          Length = 1588

 Score = 30.4 bits (67), Expect = 9.9
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 23/94 (24%)

Query: 149  RIEERKAIIGLYNYAHEMTHGASDREYPR--LGQMIVDYENPLKKMMEEFVPHS------ 200
            ++  RK ++    Y H + H  S  EY R   G+ +  YE P  K  E F+  S      
Sbjct: 1127 KVHSRKCLVDSREYTHSVIHTHSISEYQRDYTGEQL--YECP--KCGESFIHSSFLFEHQ 1182

Query: 201  -----------KSLSDALISLQMVYPRRNLSADQ 223
                       K   D  I+L  + PRRN +A++
Sbjct: 1183 RIHEQDQLYSMKGCDDGFIALLPMKPRRNRAAER 1216


>gi|33354285 paternally expressed 3 isoform 1 [Homo sapiens]
          Length = 1588

 Score = 30.4 bits (67), Expect = 9.9
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 23/94 (24%)

Query: 149  RIEERKAIIGLYNYAHEMTHGASDREYPR--LGQMIVDYENPLKKMMEEFVPHS------ 200
            ++  RK ++    Y H + H  S  EY R   G+ +  YE P  K  E F+  S      
Sbjct: 1127 KVHSRKCLVDSREYTHSVIHTHSISEYQRDYTGEQL--YECP--KCGESFIHSSFLFEHQ 1182

Query: 201  -----------KSLSDALISLQMVYPRRNLSADQ 223
                       K   D  I+L  + PRRN +A++
Sbjct: 1183 RIHEQDQLYSMKGCDDGFIALLPMKPRRNRAAER 1216


>gi|44888835 ATPase, class I, type 8B, member 3 [Homo sapiens]
          Length = 1300

 Score = 30.4 bits (67), Expect = 9.9
 Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 565 YSIAFPLLCTHFMSCTHELCPEERHHIGDRSLS--LCNMFLDEMAKQARNLITDICTEQ- 621
           +S++ P++C  F+  T +L  +   H  DR+++   C + + +  KQ +    D+C    
Sbjct: 183 FSLSTPMVCLLFIRATRDLVDDMGRHKSDRAINNRPCQILMGKSFKQKK--WQDLCVGDV 240

Query: 622 -CTLSDQLLP 630
            C   D ++P
Sbjct: 241 VCLRKDNIVP 250


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.134    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,772,733
Number of Sequences: 37866
Number of extensions: 1471378
Number of successful extensions: 4082
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 4075
Number of HSP's gapped (non-prelim): 16
length of query: 1128
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1015
effective length of database: 13,968,660
effective search space: 14178189900
effective search space used: 14178189900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.