CCM2 3578

Name: CCM2	Sequence: fasta or formatted (444aa)		NCBI GI: 13899275
Description: cerebral cavernous malformation 2 isoform 2		Referenced in: Additional Brain Proteins Cardiovascular System
Other entries for this name: alt prot [465aa] cerebral cavernous malformation 2 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 33 2 C cysteine 1.8 8 2 D aspartate 7.0 31 2 E glutamate 8.1 36 3 F phenylalanine 3.4 15 1 G glycine 6.1 27 2 H histidine 3.6 16 2 I isoleucine 5.6 25 2 K lysine 5.2 23 2 L leucine 10.4 46 3 M methionine 0.9 4 1 N asparagine 1.8 8 1 P proline 4.1 18 1 Q glutamine 3.2 14 2 R arginine 5.6 25 2 S serine 11.9 53 3 T threonine 5.4 24 2 V valine 5.9 26 2 W tryptophan 0.5 2 1 Y tyrosine 2.3 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cerebral cavernous malformation 2 isoform 2 CCM2 0.977 cerebral cavernous malformation 2 isoform 1 C20orf160 0.142 hypothetical protein LOC140706 SYNE1 0.008 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.008 spectrin repeat containing, nuclear envelope 1 isof... MLH1 0.007 MutL protein homolog 1 MARCH7 0.006 axotrophin CHRNA3 0.006 cholinergic receptor, nicotinic, alpha 3 CRKRS 0.006 Cdc2-related kinase, arginine/serine-rich isoform 2... CRKRS 0.006 Cdc2-related kinase, arginine/serine-rich isoform 1... BIVM 0.006 basic, immunoglobulin-like variable motif containing... BIRC6 0.006 baculoviral IAP repeat-containing 6 C11orf63 0.006 hypothetical protein LOC79864 isoform 2 CIZ1 0.005 CDKN1A interacting zinc finger protein 1 isoform 3 ... TTLL6 0.005 tubulin tyrosine ligase-like family, member 6 isofo... CYP20A1 0.005 cytochrome P450, family 20, subfamily A, polypeptide... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.