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Search of human proteins with 6912708
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6912708 translocase of inner mitochondrial membrane 10
homolog [Homo sapiens]
(90 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6912708 translocase of inner mitochondrial membrane 10 homolo... 185 8e-48
gi|6912714 translocase of inner mitochondrial membrane 9 homolog... 40 5e-04
gi|6912382 fractured callus expressed transcript 1 [Homo sapiens] 37 0.003
gi|11024700 translocase of inner mitochondrial membrane 13 [Homo... 36 0.006
gi|189491675 hypothetical protein LOC84908 [Homo sapiens] 31 0.18
gi|170295795 hypothetical protein LOC387071 [Homo sapiens] 30 0.31
gi|188497667 trafficking protein, kinesin binding 2 [Homo sapiens] 30 0.41
gi|157502209 hypothetical protein LOC54823 [Homo sapiens] 29 0.90
gi|157502207 hypothetical protein LOC54823 [Homo sapiens] 29 0.90
gi|239748186 PREDICTED: similar to CG5323 [Homo sapiens] 28 1.5
gi|239742080 PREDICTED: hypothetical protein XP_002342431 [Homo ... 28 1.5
gi|4758152 translocase of inner mitochondrial membrane 8 homolog... 28 1.5
gi|148746218 TAO kinase 3 [Homo sapiens] 27 2.6
gi|55770834 centromere protein F [Homo sapiens] 27 4.5
gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens] 26 5.9
gi|124256489 crooked neck-like 1 protein [Homo sapiens] 26 5.9
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 26 7.7
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr... 26 7.7
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 26 7.7
gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens] 25 10.0
gi|225735625 disco-interacting protein 2A isoform e [Homo sapiens] 25 10.0
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens] 25 10.0
gi|108773804 Fraser syndrome 1 [Homo sapiens] 25 10.0
gi|60498978 elastin microfibril interfacer 2 [Homo sapiens] 25 10.0
gi|134133246 hypothetical protein LOC285753 [Homo sapiens] 25 10.0
gi|28603844 hypothetical protein LOC285753 [Homo sapiens] 25 10.0
>gi|6912708 translocase of inner mitochondrial membrane 10 homolog
[Homo sapiens]
Length = 90
Score = 185 bits (469), Expect = 8e-48
Identities = 90/90 (100%), Positives = 90/90 (100%)
Query: 1 MDPLRAQQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLD 60
MDPLRAQQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLD
Sbjct: 1 MDPLRAQQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLD 60
Query: 61 IHERMGKKLTELSMQDEELMKRVQQSSGPA 90
IHERMGKKLTELSMQDEELMKRVQQSSGPA
Sbjct: 61 IHERMGKKLTELSMQDEELMKRVQQSSGPA 90
>gi|6912714 translocase of inner mitochondrial membrane 9 homolog
[Homo sapiens]
Length = 89
Score = 39.7 bits (91), Expect = 5e-04
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 22 YNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMGKKLTELSMQDEELM 80
YN++T C CV + E+ E+ C + C+ KYL + +R+ + E +Q E +
Sbjct: 21 YNKLTETCFLDCVKD-FTTREVKPEETTCSEHCLQKYLKMTQRISMRFQEYHIQQNEAL 78
>gi|6912382 fractured callus expressed transcript 1 [Homo sapiens]
Length = 103
Score = 37.4 bits (85), Expect = 0.003
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 21 MYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERM 65
+YNRMT C ++CVP + A L E CL C K + + R+
Sbjct: 20 VYNRMTELCFQRCVPSLHHRA-LDAEEEACLHSCAGKLIHSNHRL 63
>gi|11024700 translocase of inner mitochondrial membrane 13 [Homo
sapiens]
Length = 95
Score = 36.2 bits (82), Expect = 0.006
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 1 MDP-LRAQQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYL 59
+DP L +Q+ ++ V ++ RMT C RKC+ L E C+ C+ +Y+
Sbjct: 17 LDPGLIMEQVKVQIAVANAQELLQRMTDKCFRKCIGK--PGGSLDNSEQKCIAMCMDRYM 74
Query: 60 D 60
D
Sbjct: 75 D 75
>gi|189491675 hypothetical protein LOC84908 [Homo sapiens]
Length = 138
Score = 31.2 bits (69), Expect = 0.18
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 3 PLRAQQLAAELEVEMMADMYNRMTSACHRKC---VPPHYKEAELSKGESVCLDRCVSKYL 59
PL Q E+E D R T C+ K + KE ++ + C+ +CV ++
Sbjct: 60 PLAQAQALVTSELEKFQDRLARCTMHCNDKAKDSIDAGSKELQVKQQLDSCVTKCVDDHM 119
Query: 60 DIHERMGKKLTE 71
+ M KK+ E
Sbjct: 120 HLIPTMTKKMKE 131
>gi|170295795 hypothetical protein LOC387071 [Homo sapiens]
Length = 138
Score = 30.4 bits (67), Expect = 0.31
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 3 PLRAQQLAAELEVEMMADMYNRMTSACHRKC---VPPHYKEAELSKGESVCLDRCVSKYL 59
PL Q E+E D R T C+ K + KE ++ + C+ +CV ++
Sbjct: 60 PLAQVQALVTSELEKFQDHLARCTMHCNDKAKDSIDAGSKELQVKQQLDGCVTKCVDDHI 119
Query: 60 DIHERMGKKLTE 71
+ M KK+ E
Sbjct: 120 HLISTMTKKMKE 131
>gi|188497667 trafficking protein, kinesin binding 2 [Homo sapiens]
Length = 914
Score = 30.0 bits (66), Expect = 0.41
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 7 QQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMG 66
Q+ ELE E MA + ACH K Y+E E + CV + + + +M
Sbjct: 214 QEKLKELEEENMA----LRSKACHIKTETVTYEEKEQQ-----LVSDCVKELRETNAQMS 264
Query: 67 KKLTELSMQDEELMKRVQQSS 87
+ ELS + +EL++ ++ S
Sbjct: 265 RMTEELSGKSDELIRYQEELS 285
>gi|157502209 hypothetical protein LOC54823 [Homo sapiens]
Length = 900
Score = 28.9 bits (63), Expect = 0.90
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 17/73 (23%)
Query: 12 ELEVEMMADMYNRMTSACHRKCVPPH------------YKEAELSKGESVCLDRCVSKYL 59
EL E++ N T CH+ C+P YKE + G S+ L+ VS
Sbjct: 529 ELSAELLHLSLN--TDVCHQPCIPKQQLKAETTPLKESYKEESTNSGLSILLESIVS--- 583
Query: 60 DIHERMGKKLTEL 72
D+ + +G L+ +
Sbjct: 584 DLEKSLGTGLSSI 596
>gi|157502207 hypothetical protein LOC54823 [Homo sapiens]
Length = 900
Score = 28.9 bits (63), Expect = 0.90
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 17/73 (23%)
Query: 12 ELEVEMMADMYNRMTSACHRKCVPPH------------YKEAELSKGESVCLDRCVSKYL 59
EL E++ N T CH+ C+P YKE + G S+ L+ VS
Sbjct: 529 ELSAELLHLSLN--TDVCHQPCIPKQQLKAETTPLKESYKEESTNSGLSILLESIVS--- 583
Query: 60 DIHERMGKKLTEL 72
D+ + +G L+ +
Sbjct: 584 DLEKSLGTGLSSI 596
>gi|239748186 PREDICTED: similar to CG5323 [Homo sapiens]
Length = 135
Score = 28.1 bits (61), Expect = 1.5
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 5 RAQQLAAELEVEMMADMYNRMTSACHRKC---VPPHYKEAELSKGESVCLDRCVSKYLDI 61
+AQ L E+E D + T+ C+ K + KE ++ + C+ +CV ++ +
Sbjct: 60 QAQALVTS-ELEKFQDHLAQCTTQCNNKAKDSIAAGSKELQVKQQLDGCVTKCVDDHMHL 118
Query: 62 HERMGKKLTE 71
M KK+ E
Sbjct: 119 IPTMTKKMKE 128
>gi|239742080 PREDICTED: hypothetical protein XP_002342431 [Homo
sapiens]
Length = 135
Score = 28.1 bits (61), Expect = 1.5
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 5 RAQQLAAELEVEMMADMYNRMTSACHRKC---VPPHYKEAELSKGESVCLDRCVSKYLDI 61
+AQ L E+E D + T+ C+ K + KE ++ + C+ +CV ++ +
Sbjct: 60 QAQALVTS-ELEKFQDHLAQCTTQCNNKAKDSIAAGSKELQVKQQLDGCVTKCVDDHMHL 118
Query: 62 HERMGKKLTE 71
M KK+ E
Sbjct: 119 IPTMTKKMKE 128
>gi|4758152 translocase of inner mitochondrial membrane 8 homolog
A isoform 1 [Homo sapiens]
Length = 97
Score = 28.1 bits (61), Expect = 1.5
Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 1 MDPLRAQQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLD 60
+DP + E + + + ++MT C KC+ +L C CV +++D
Sbjct: 15 VDPQLQHFIEVETQKQRFQQLVHQMTELCWEKCMDK--PGPKLDSRAEACFVNCVERFID 72
Query: 61 IHERMGKKLTE 71
+ + +L +
Sbjct: 73 TSQFILNRLEQ 83
>gi|148746218 TAO kinase 3 [Homo sapiens]
Length = 898
Score = 27.3 bits (59), Expect = 2.6
Identities = 19/78 (24%), Positives = 32/78 (41%)
Query: 6 AQQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERM 65
AQ + L+ D + R C +K AEL + + V DR + +D+ +R
Sbjct: 234 AQNDSPTLQSNEWTDSFRRFVDYCLQKIPQERPTSAELLRHDFVRRDRPLRVLIDLIQRT 293
Query: 66 GKKLTELSMQDEELMKRV 83
+ EL MK++
Sbjct: 294 KDAVRELDNLQYRKMKKI 311
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 26.6 bits (57), Expect = 4.5
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 37 HYKEAELSKGESVC--LDRCVSKYLDIHERMGKKLTELSMQDEELMKRVQQSSG 88
H +E +L C L++ V + + + +KL S +EL++RV+ S G
Sbjct: 1812 HLQEVQLMTKIEACIELEKIVGELKKENSDLSEKLEYFSCDHQELLQRVETSEG 1865
>gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]
Length = 269
Score = 26.2 bits (56), Expect = 5.9
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 62 HERMGKKLTELSMQDEELMKRVQQ 85
++ M +KL ELS ++E+L +RV+Q
Sbjct: 216 NQEMQQKLVELSAENEKLHQRVEQ 239
>gi|124256489 crooked neck-like 1 protein [Homo sapiens]
Length = 848
Score = 26.2 bits (56), Expect = 5.9
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 14 EVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMGKKLTELS 73
E E ++Y R+ V + + ELS G+ L +C I+E K +
Sbjct: 691 ETERTRNLYRRLLQRTQHVKVWISFAQFELSSGKEGSLTKC----RQIYEEANKTMRNCE 746
Query: 74 MQDEELM 80
++E LM
Sbjct: 747 EKEERLM 753
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 25.8 bits (55), Expect = 7.7
Identities = 8/21 (38%), Positives = 18/21 (85%)
Query: 65 MGKKLTELSMQDEELMKRVQQ 85
+GKK+TEL+++++ L K +++
Sbjct: 688 LGKKITELTLKNQTLQKEIEK 708
>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 1 [Homo sapiens]
Length = 1416
Score = 25.8 bits (55), Expect = 7.7
Identities = 8/21 (38%), Positives = 18/21 (85%)
Query: 65 MGKKLTELSMQDEELMKRVQQ 85
+GKK+TEL+++++ L K +++
Sbjct: 701 LGKKITELTLKNQTLQKEIEK 721
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 25.8 bits (55), Expect = 7.7
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 12 ELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMGKKLTE 71
+LE ++ A +TS H + K L G+ + +++ H++ K+L
Sbjct: 2358 QLETDLQAS--RELTSRLHEEINMKEQKIISLLSGKEEAIQVAIAELRQQHDKEIKELEN 2415
Query: 72 LSMQDEE 78
L Q+EE
Sbjct: 2416 LLSQEEE 2422
>gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens]
Length = 602
Score = 25.4 bits (54), Expect = 10.0
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 17 MMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMGKKLTELSMQD 76
M +D+Y + K +KEA + E + L K L E + + E+ +
Sbjct: 317 MESDIYTEVRELVSLKQEQQAFKEA--ADTERLALQALTEKLLRSEESVSRLPEEIRRLE 374
Query: 77 EELMKRVQQSSGP 89
EEL + S GP
Sbjct: 375 EELRQLKSDSHGP 387
>gi|225735625 disco-interacting protein 2A isoform e [Homo
sapiens]
Length = 1110
Score = 25.4 bits (54), Expect = 10.0
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Query: 3 PLRAQQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAEL---SKGESVCLDRCVSKY 58
P ++ AELE+E+ D++ A K YKE ++ SK SV + V Y
Sbjct: 14 PAEVRESLAELELELSEDVHTEAVQAALAK-----YKERKMPMPSKRRSVLVHSSVETY 67
>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
Length = 331
Score = 25.4 bits (54), Expect = 10.0
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 31 RKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMGKKLTELSMQDEELMKRVQQSSGP 89
RK +P H + +LSK E + R KY++ ++ L+ Q+EE +R + P
Sbjct: 211 RKLIPTHPPDKKLSKNEIL---RLAMKYINFLAKL------LNDQEEEGTQRAKTGKDP 260
>gi|108773804 Fraser syndrome 1 [Homo sapiens]
Length = 4011
Score = 25.4 bits (54), Expect = 10.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 20 DMYNRMTSACHRKCVPPHYKEAELSKGESVCL 51
D Y AC +C+ Y+++ L K +S CL
Sbjct: 978 DGYVLQDGACVEQCLSSFYQDSGLCKCDSYCL 1009
>gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]
Length = 1053
Score = 25.4 bits (54), Expect = 10.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 56 SKYLDIHERMGKKLTELSMQDEELMKRVQQSSGPA 90
S YL + E +G+K T L + L R+Q+ S A
Sbjct: 360 SSYLGVIELIGEKETSLRKEINNLRARLQEPSAQA 394
>gi|134133246 hypothetical protein LOC285753 [Homo sapiens]
Length = 460
Score = 25.4 bits (54), Expect = 10.0
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 12/64 (18%)
Query: 23 NRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMGKKLTELSMQDEELMKR 82
+R TS C K +PP + K S+C ++ M +L ++SM+ +EL+K+
Sbjct: 300 SRTTSWC--KAIPP-----DSEKSISIC-----DNLSELLMAMQDELDQMSMEHQELLKQ 347
Query: 83 VQQS 86
++++
Sbjct: 348 MKET 351
>gi|28603844 hypothetical protein LOC285753 [Homo sapiens]
Length = 460
Score = 25.4 bits (54), Expect = 10.0
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 12/64 (18%)
Query: 23 NRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLDIHERMGKKLTELSMQDEELMKR 82
+R TS C K +PP + K S+C ++ M +L ++SM+ +EL+K+
Sbjct: 300 SRTTSWC--KAIPP-----DSEKSISIC-----DNLSELLMAMQDELDQMSMEHQELLKQ 347
Query: 83 VQQS 86
++++
Sbjct: 348 MKET 351
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.128 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,292,201
Number of Sequences: 37866
Number of extensions: 110575
Number of successful extensions: 428
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 413
Number of HSP's gapped (non-prelim): 31
length of query: 90
length of database: 18,247,518
effective HSP length: 62
effective length of query: 28
effective length of database: 15,899,826
effective search space: 445195128
effective search space used: 445195128
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.