Search of human proteins with 6912524

Search of human proteins with 6912524

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|6912524 nuclear prelamin A recognition factor isoform a
[Homo sapiens]
         (456 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6912524 nuclear prelamin A recognition factor isoform a [Homo...   926   0.0  
gi|14165461 nuclear prelamin A recognition factor isoform b [Hom...   904   0.0  
gi|134284357 nuclear prelamin A recognition factor isoform d [Ho...   807   0.0  
gi|84452151 nuclear prelamin A recognition factor isoform c [Hom...   801   0.0  
gi|11968051 nuclear prelamin A recognition factor-like [Homo sap...   434   e-122
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom...    30   4.5  
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom...    30   4.5  
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ...    30   4.5  
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]     30   4.5  
gi|30794372 polybromo 1 isoform 1 [Homo sapiens]                       30   4.5  
gi|93102371 polybromo 1 isoform 2 [Homo sapiens]                       30   4.5  
gi|41281917 polybromo 1 isoform 4 [Homo sapiens]                       30   4.5  
gi|156547039 zinc finger protein 223 [Homo sapiens]                    30   4.5  
gi|155029539 alpha accessory factor 132 [Homo sapiens]                 29   7.7  

>gi|6912524 nuclear prelamin A recognition factor isoform a [Homo
           sapiens]
          Length = 456

 Score =  926 bits (2394), Expect = 0.0
 Identities = 456/456 (100%), Positives = 456/456 (100%)

Query: 1   MKCEHCTRKECSKKTKTDDQENVSADAPSPAQENGEKGEFHKLADAKIFLSDCLACDSCM 60
           MKCEHCTRKECSKKTKTDDQENVSADAPSPAQENGEKGEFHKLADAKIFLSDCLACDSCM
Sbjct: 1   MKCEHCTRKECSKKTKTDDQENVSADAPSPAQENGEKGEFHKLADAKIFLSDCLACDSCM 60

Query: 61  TAEEGVQLSQQNAKDFFRVLNLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 120
           TAEEGVQLSQQNAKDFFRVLNLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR
Sbjct: 61  TAEEGVQLSQQNAKDFFRVLNLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 120

Query: 121 LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 180
           LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE
Sbjct: 121 LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 180

Query: 181 RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL 240
           RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL
Sbjct: 181 RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL 240

Query: 241 PPALHGSRGADCVLTSGEIAQIMEQGDLSVRDAAVDTLFGDLKEDKVTRHDGASSDGHLA 300
           PPALHGSRGADCVLTSGEIAQIMEQGDLSVRDAAVDTLFGDLKEDKVTRHDGASSDGHLA
Sbjct: 241 PPALHGSRGADCVLTSGEIAQIMEQGDLSVRDAAVDTLFGDLKEDKVTRHDGASSDGHLA 300

Query: 301 HIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKLK 360
           HIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKLK
Sbjct: 301 HIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKLK 360

Query: 361 KGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHVQE 420
           KGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHVQE
Sbjct: 361 KGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHVQE 420

Query: 421 LYQEWLEGINSPKAREVLHTTYQSQERGTHSLDIKW 456
           LYQEWLEGINSPKAREVLHTTYQSQERGTHSLDIKW
Sbjct: 421 LYQEWLEGINSPKAREVLHTTYQSQERGTHSLDIKW 456


>gi|14165461 nuclear prelamin A recognition factor isoform b [Homo
           sapiens]
          Length = 502

 Score =  904 bits (2337), Expect = 0.0
 Identities = 456/502 (90%), Positives = 456/502 (90%), Gaps = 46/502 (9%)

Query: 1   MKCEHCTRKECSKKTKTDDQENVSADAPSPAQENGEKGEFHKLADAKIFLSDCLACDSCM 60
           MKCEHCTRKECSKKTKTDDQENVSADAPSPAQENGEKGEFHKLADAKIFLSDCLACDSCM
Sbjct: 1   MKCEHCTRKECSKKTKTDDQENVSADAPSPAQENGEKGEFHKLADAKIFLSDCLACDSCM 60

Query: 61  TAEEGVQLSQQNAKDFFRVLNLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 120
           TAEEGVQLSQQNAKDFFRVLNLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR
Sbjct: 61  TAEEGVQLSQQNAKDFFRVLNLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 120

Query: 121 LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 180
           LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE
Sbjct: 121 LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 180

Query: 181 RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL 240
           RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL
Sbjct: 181 RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL 240

Query: 241 PPALHGSRGADCVLTS-------------------------------------------- 256
           PPALHGSRGADCVLTS                                            
Sbjct: 241 PPALHGSRGADCVLTSEISQAWWCTPVITATREAAARESLEPGRQRLQRDKIAPLDSSLG 300

Query: 257 --GEIAQIMEQGDLSVRDAAVDTLFGDLKEDKVTRHDGASSDGHLAHIFRHAAKELFNED 314
             GEIAQIMEQGDLSVRDAAVDTLFGDLKEDKVTRHDGASSDGHLAHIFRHAAKELFNED
Sbjct: 301 GGGEIAQIMEQGDLSVRDAAVDTLFGDLKEDKVTRHDGASSDGHLAHIFRHAAKELFNED 360

Query: 315 VEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKLKKGKFPFHFVEVLAC 374
           VEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKLKKGKFPFHFVEVLAC
Sbjct: 361 VEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKLKKGKFPFHFVEVLAC 420

Query: 375 AGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHVQELYQEWLEGINSPKA 434
           AGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHVQELYQEWLEGINSPKA
Sbjct: 421 AGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHVQELYQEWLEGINSPKA 480

Query: 435 REVLHTTYQSQERGTHSLDIKW 456
           REVLHTTYQSQERGTHSLDIKW
Sbjct: 481 REVLHTTYQSQERGTHSLDIKW 502


>gi|134284357 nuclear prelamin A recognition factor isoform d [Homo
           sapiens]
          Length = 408

 Score =  807 bits (2084), Expect = 0.0
 Identities = 408/456 (89%), Positives = 408/456 (89%), Gaps = 48/456 (10%)

Query: 1   MKCEHCTRKECSKKTKTDDQENVSADAPSPAQENGEKGEFHKLADAKIFLSDCLACDSCM 60
           MKCEHCTRKECSKKTKTDDQENVSADAPSPAQENGE                        
Sbjct: 1   MKCEHCTRKECSKKTKTDDQENVSADAPSPAQENGE------------------------ 36

Query: 61  TAEEGVQLSQQNAKDFFRVLNLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 120
                                   KCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR
Sbjct: 37  ------------------------KCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRR 72

Query: 121 LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 180
           LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE
Sbjct: 73  LCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAE 132

Query: 181 RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL 240
           RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL
Sbjct: 133 RVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESL 192

Query: 241 PPALHGSRGADCVLTSGEIAQIMEQGDLSVRDAAVDTLFGDLKEDKVTRHDGASSDGHLA 300
           PPALHGSRGADCVLTSGEIAQIMEQGDLSVRDAAVDTLFGDLKEDKVTRHDGASSDGHLA
Sbjct: 193 PPALHGSRGADCVLTSGEIAQIMEQGDLSVRDAAVDTLFGDLKEDKVTRHDGASSDGHLA 252

Query: 301 HIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKLK 360
           HIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKLK
Sbjct: 253 HIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKLK 312

Query: 361 KGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHVQE 420
           KGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHVQE
Sbjct: 313 KGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHVQE 372

Query: 421 LYQEWLEGINSPKAREVLHTTYQSQERGTHSLDIKW 456
           LYQEWLEGINSPKAREVLHTTYQSQERGTHSLDIKW
Sbjct: 373 LYQEWLEGINSPKAREVLHTTYQSQERGTHSLDIKW 408


>gi|84452151 nuclear prelamin A recognition factor isoform c [Homo
           sapiens]
          Length = 397

 Score =  801 bits (2069), Expect = 0.0
 Identities = 397/397 (100%), Positives = 397/397 (100%)

Query: 60  MTAEEGVQLSQQNAKDFFRVLNLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASR 119
           MTAEEGVQLSQQNAKDFFRVLNLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASR
Sbjct: 1   MTAEEGVQLSQQNAKDFFRVLNLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASR 60

Query: 120 RLCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYA 179
           RLCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYA
Sbjct: 61  RLCGFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYA 120

Query: 180 ERVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQES 239
           ERVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQES
Sbjct: 121 ERVLGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQES 180

Query: 240 LPPALHGSRGADCVLTSGEIAQIMEQGDLSVRDAAVDTLFGDLKEDKVTRHDGASSDGHL 299
           LPPALHGSRGADCVLTSGEIAQIMEQGDLSVRDAAVDTLFGDLKEDKVTRHDGASSDGHL
Sbjct: 181 LPPALHGSRGADCVLTSGEIAQIMEQGDLSVRDAAVDTLFGDLKEDKVTRHDGASSDGHL 240

Query: 300 AHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKL 359
           AHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKL
Sbjct: 241 AHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKL 300

Query: 360 KKGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHVQ 419
           KKGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHVQ
Sbjct: 301 KKGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHVQ 360

Query: 420 ELYQEWLEGINSPKAREVLHTTYQSQERGTHSLDIKW 456
           ELYQEWLEGINSPKAREVLHTTYQSQERGTHSLDIKW
Sbjct: 361 ELYQEWLEGINSPKAREVLHTTYQSQERGTHSLDIKW 397


>gi|11968051 nuclear prelamin A recognition factor-like [Homo
           sapiens]
          Length = 476

 Score =  434 bits (1116), Expect = e-122
 Identities = 219/457 (47%), Positives = 307/457 (67%), Gaps = 11/457 (2%)

Query: 9   KECSKKTKTDDQENVSADAPSPAQENG------EKGEFHKLADAKIFLSDCLACDSCMTA 62
           +EC K  K + +   S  A    +++G      + G   +L  AK+ L+DCLAC  C+T+
Sbjct: 22  QECIKPVKVEKRAG-SGVAKIRIEDDGSYFQINQDGGTRRLEKAKVSLNDCLACSGCITS 80

Query: 63  EEGVQLSQQNAKDFFRVLNLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVTDASRRLC 122
            E V ++QQ+ ++  +VL+ NK    S+ +++VVSV PQS    AA+F L+ TD +R+L 
Sbjct: 81  AETVLITQQSHEELKKVLDANKMAAPSQQRLVVVSVSPQSRASLAARFQLNPTDTARKLT 140

Query: 123 GFLKSLGVHYVFDTTIAADFSILESQKEFVRRYRQHSEEERTLPMLTSACPGWVRYAERV 182
            F K +GVH+VFDT  +  FS+LESQ+EFVRR+R  ++  + LP+L SACPGW+ YAE+ 
Sbjct: 141 SFFKKIGVHFVFDTAFSRHFSLLESQREFVRRFRGQADCRQALPLLASACPGWICYAEKT 200

Query: 183 LGRPITAHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPCYDKKLEALQESLPP 242
            G  I  H+ TA+SPQQVMGSLVKD+FA+QQ+L+P+KI+HV V PCYDKKLEA +     
Sbjct: 201 HGSFILPHISTARSPQQVMGSLVKDFFAQQQHLTPDKIYHVTVMPCYDKKLEASRPDFFN 260

Query: 243 ALHGSRGADCVLTSGEIAQIMEQGDLSVRD---AAVDTLFGDLKEDKVTRHDGASSDGHL 299
             H +R  DCVLT+GE+ +++E+  +S+ D   A +D+L      ++ T H G  S G+L
Sbjct: 261 QEHQTRDVDCVLTTGEVFRLLEEEGVSLPDLEPAPLDSLCSGASAEEPTSHRGGGSGGYL 320

Query: 300 AHIFRHAAKELFNEDVEEVTYRALRNKDFQEVTLEKNGEVVLRFAAAYGFRNIQNMILKL 359
            H+FRHAA+ELF   V EVTY+ LRNKDFQEVTLEK G+V+L FA AYGFRNIQN++ +L
Sbjct: 321 EHVFRHAARELFGIHVAEVTYKPLRNKDFQEVTLEKEGQVLLHFAMAYGFRNIQNLVQRL 380

Query: 360 KKGKFPFHFVEVLACAGGCLNGRGQAQTPDGHADKALLRQMEGIYADIPVRRPESSAHVQ 419
           K+G+ P+H+VEV+AC  GCLNG GQ Q PD    + LL+ +E +Y  +    PE +  VQ
Sbjct: 381 KRGRCPYHYVEVMACPSGCLNGGGQLQAPD-RPSRELLQHVERLYGMVRAEAPEDAPGVQ 439

Query: 420 ELYQEWLEGINSPKAREVLHTTYQSQERGTHSLDIKW 456
           ELY  WL+G +S  A  +LHT Y + E+ +  L I+W
Sbjct: 440 ELYTHWLQGTDSECAGRLLHTQYHAVEKASTGLGIRW 476


>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
           sapiens]
          Length = 305

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)

Query: 182 VLGRPIT---AHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPC 228
           + GRP     A      + +++ G L+ D+FA+++  +PEK    + APC
Sbjct: 235 ISGRPAAGTAAASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPC 284


>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
           sapiens]
          Length = 305

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)

Query: 182 VLGRPIT---AHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPC 228
           + GRP     A      + +++ G L+ D+FA+++  +PEK    + APC
Sbjct: 235 ISGRPAAGTAAASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPC 284


>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
           sapiens]
          Length = 316

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)

Query: 182 VLGRPIT---AHLCTAKSPQQVMGSLVKDYFARQQNLSPEKIFHVIVAPC 228
           + GRP     A      + +++ G L+ D+FA+++  +PEK    + APC
Sbjct: 246 ISGRPAAGTAAASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPC 295


>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
          Length = 3664

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 408 PVRRPESSAHVQE-LYQEWLEGINSPKAREVLHTTYQSQERGTHSLD 453
           P   P  S H +E  Y+  L+G +  + R   H+ Y   ERGT   D
Sbjct: 114 PAYGPPPSLHAREGRYERRLDGASDNRERAYEHSAYGHHERGTGGFD 160


>gi|30794372 polybromo 1 isoform 1 [Homo sapiens]
          Length = 1602

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 17/79 (21%)

Query: 304 RHAAKELFNEDVEEVTYRALR-NKDFQEV----------------TLEKNGEVVLRFAAA 346
           R+   +LF E + EV  RA R N+   E+                 L KNGE++L  A +
Sbjct: 801 RYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALS 860

Query: 347 YGFRNIQNMILKLKKGKFP 365
           Y  +++ N + K +K K P
Sbjct: 861 YTTKHLHNDVEKERKEKLP 879


>gi|93102371 polybromo 1 isoform 2 [Homo sapiens]
          Length = 1582

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 17/79 (21%)

Query: 304 RHAAKELFNEDVEEVTYRALR-NKDFQEV----------------TLEKNGEVVLRFAAA 346
           R+   +LF E + EV  RA R N+   E+                 L KNGE++L  A +
Sbjct: 833 RYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALS 892

Query: 347 YGFRNIQNMILKLKKGKFP 365
           Y  +++ N + K +K K P
Sbjct: 893 YTTKHLHNDVEKERKEKLP 911


>gi|41281917 polybromo 1 isoform 4 [Homo sapiens]
          Length = 1582

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 17/79 (21%)

Query: 304 RHAAKELFNEDVEEVTYRALR-NKDFQEV----------------TLEKNGEVVLRFAAA 346
           R+   +LF E + EV  RA R N+   E+                 L KNGE++L  A +
Sbjct: 833 RYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALS 892

Query: 347 YGFRNIQNMILKLKKGKFP 365
           Y  +++ N + K +K K P
Sbjct: 893 YTTKHLHNDVEKERKEKLP 911


>gi|156547039 zinc finger protein 223 [Homo sapiens]
          Length = 482

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 2   KCEHCTRKECSKKTKTDDQENVSADAPSPAQENGEK 37
           KCE C +K   +  + D Q+N S + PS  ++ G++
Sbjct: 429 KCEDCGKKLVYRSYRKDQQKNHSGENPSKCEDCGKR 464


>gi|155029539 alpha accessory factor 132 [Homo sapiens]
          Length = 1217

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 56  CDSCMTAEEGVQLSQQNAKDFFRVLNLNKKCDTSKHKVLVVSVCPQSLPYFAAKFNLSVT 115
           C SC+T ++   L  ++++D   VL+ NK    S    L+      SL  F+A+      
Sbjct: 848 CASCLTVQDNWTLELESSQDIQDVLDANKSLPESSLTDLLSDNFTDSLVSFSAEI----- 902

Query: 116 DASRRLC 122
             SR LC
Sbjct: 903 -LSRTLC 908


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,557,579
Number of Sequences: 37866
Number of extensions: 763564
Number of successful extensions: 2086
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2067
Number of HSP's gapped (non-prelim): 22
length of query: 456
length of database: 18,247,518
effective HSP length: 106
effective length of query: 350
effective length of database: 14,233,722
effective search space: 4981802700
effective search space used: 4981802700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.