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Search of human proteins with 66529294
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|66529294 paraoxonase 2 isoform 1 [Homo sapiens]
(354 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|66529294 paraoxonase 2 isoform 1 [Homo sapiens] 715 0.0
gi|66529396 paraoxonase 2 isoform 2 [Homo sapiens] 681 0.0
gi|19923106 paraoxonase 1 precursor [Homo sapiens] 496 e-140
gi|29788996 paraoxonase 3 [Homo sapiens] 488 e-138
gi|48717495 chondroitin polymerizing factor 2 [Homo sapiens] 33 0.39
gi|149944516 tet oncogene family member 3 [Homo sapiens] 33 0.51
gi|42476013 NHL repeat containing 2 [Homo sapiens] 31 1.5
gi|157502171 sorting nexin 19 [Homo sapiens] 30 2.5
gi|124256489 crooked neck-like 1 protein [Homo sapiens] 30 4.3
gi|23510338 ubiquitin-activating enzyme E1 [Homo sapiens] 29 5.6
gi|23510340 ubiquitin-activating enzyme E1 [Homo sapiens] 29 5.6
gi|24308201 chromosome 20 open reading frame 3 [Homo sapiens] 29 5.6
gi|4826724 zygin 1 isoform 1 [Homo sapiens] 29 7.3
gi|12025680 zygin 1 isoform 2 [Homo sapiens] 29 7.3
gi|226442779 jumonji domain containing 1A [Homo sapiens] 29 7.3
gi|20357522 jumonji domain containing 1A [Homo sapiens] 29 7.3
gi|71773106 adaptor-related protein complex 2, beta 1 subunit is... 29 7.3
gi|4557469 adaptor-related protein complex 2, beta 1 subunit iso... 29 7.3
>gi|66529294 paraoxonase 2 isoform 1 [Homo sapiens]
Length = 354
Score = 715 bits (1846), Expect = 0.0
Identities = 354/354 (100%), Positives = 354/354 (100%)
Query: 1 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN 60
MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN
Sbjct: 1 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN 60
Query: 61 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI 120
GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI
Sbjct: 61 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI 120
Query: 121 DNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT 180
DNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT
Sbjct: 121 DNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT 180
Query: 181 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL 240
NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL
Sbjct: 181 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL 240
Query: 241 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS 300
AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS
Sbjct: 241 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS 300
Query: 301 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL 354
SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL
Sbjct: 301 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL 354
>gi|66529396 paraoxonase 2 isoform 2 [Homo sapiens]
Length = 342
Score = 681 bits (1756), Expect = 0.0
Identities = 342/354 (96%), Positives = 342/354 (96%), Gaps = 12/354 (3%)
Query: 1 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN 60
MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN
Sbjct: 1 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN 60
Query: 61 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI 120
GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI
Sbjct: 61 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI 120
Query: 121 DNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT 180
DN EFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT
Sbjct: 121 DN------------EFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT 168
Query: 181 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL 240
NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL
Sbjct: 169 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL 228
Query: 241 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS 300
AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS
Sbjct: 229 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS 288
Query: 301 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL 354
SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL
Sbjct: 289 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL 342
>gi|19923106 paraoxonase 1 precursor [Homo sapiens]
Length = 355
Score = 496 bits (1277), Expect = e-140
Identities = 234/355 (65%), Positives = 290/355 (81%), Gaps = 1/355 (0%)
Query: 1 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN 60
M +L+A+ LLG+ LAL + + RL A REV+ V+LP+C+L+KGIE GSED++ILPN
Sbjct: 1 MAKLIALTLLGMGLALFRNHQSSYQTRLNALREVQPVELPNCNLVKGIETGSEDLEILPN 60
Query: 61 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRG-FDLASFNPHGISTF 119
GLAF S GLK+PG+ SF P+ PG IL+MDL EE P EL I+ FD++SFNPHGISTF
Sbjct: 61 GLAFISSGLKYPGIKSFNPNSPGKILLMDLNEEDPTVLELGITGSKFDVSSFNPHGISTF 120
Query: 120 IDNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYA 179
D D+ +YL VVNHP+ K+TVE+FKF+E E SLLHLKT++H+LLP++NDI AVGP HFY
Sbjct: 121 TDEDNAMYLLVVNHPDAKSTVELFKFQEEEKSLLHLKTIRHKLLPNLNDIVAVGPEHFYG 180
Query: 180 TNDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADI 239
TNDHYF DP+L+ E YL L W+ VVYYSP+EV+VVAEGFD ANGINISPD KY+Y+A++
Sbjct: 181 TNDHYFLDPYLQSWEMYLGLAWSYVVYYSPSEVRVVAEGFDFANGINISPDGKYVYIAEL 240
Query: 240 LAHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPP 299
LAH+IHV EKH N LT LK L+ +TLVDN+S+DP +GD+WVGCHPNG K+F YD NPP
Sbjct: 241 LAHKIHVYEKHANWTLTPLKSLDFNTLVDNISVDPETGDLWVGCHPNGMKIFFYDSENPP 300
Query: 300 SSEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL 354
+SEVLRIQNIL+E+P VT VYA NG+VLQGS+VASVY GKLLIGT++H+ALYCEL
Sbjct: 301 ASEVLRIQNILTEEPKVTQVYAENGTVLQGSTVASVYKGKLLIGTVFHKALYCEL 355
>gi|29788996 paraoxonase 3 [Homo sapiens]
Length = 354
Score = 488 bits (1255), Expect = e-138
Identities = 232/354 (65%), Positives = 287/354 (81%)
Query: 1 MGRLVAVGLLGIALALLGERLLALRNRLKASREVESVDLPHCHLIKGIEAGSEDIDILPN 60
MG+LVA+ LLG+ L+L+GE LA R R+ ASREVE V+ +CHLI+ +E+GSEDIDILP+
Sbjct: 1 MGKLVALVLLGVGLSLVGEMFLAFRERVNASREVEPVEPENCHLIEELESGSEDIDILPS 60
Query: 61 GLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARELRISRGFDLASFNPHGISTFI 120
GLAF S GLK+PG+ +FAPD+PG I +MDL E+ PRA+ L IS GFD FNPHGIS FI
Sbjct: 61 GLAFISSGLKYPGMPNFAPDEPGKIFLMDLNEQNPRAQALEISGGFDKELFNPHGISIFI 120
Query: 121 DNDDTVYLFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFYAT 180
D D+TVYL+VVNHP K+TVEIFKFEE + SL++LKT+KHELL SVNDI +GP FYAT
Sbjct: 121 DKDNTVYLYVVNHPHMKSTVEIFKFEEQQRSLVYLKTIKHELLKSVNDIVVLGPEQFYAT 180
Query: 181 NDHYFSDPFLKYLETYLNLHWANVVYYSPNEVKVVAEGFDSANGINISPDDKYIYVADIL 240
DHYF++ L + E L+L W V++YSP EVKVVA+GF SANGI +S D KY+YVAD+
Sbjct: 181 RDHYFTNSLLSFFEMILDLRWTYVLFYSPREVKVVAKGFCSANGITVSADQKYVYVADVA 240
Query: 241 AHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWVGCHPNGQKLFVYDPNNPPS 300
A IH++EKH N +LTQLKV++L TLVDNL++DP++GDI GCHPN KL Y+P +PP
Sbjct: 241 AKNIHIMEKHDNWDLTQLKVIQLGTLVDNLTVDPATGDILAGCHPNPMKLLNYNPEDPPG 300
Query: 301 SEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGTLYHRALYCEL 354
SEVLRIQN+LSEKP V+TVYANNGSVLQG+SVASVY GK+LIGT++H+ LYCEL
Sbjct: 301 SEVLRIQNVLSEKPRVSTVYANNGSVLQGTSVASVYHGKILIGTVFHKTLYCEL 354
>gi|48717495 chondroitin polymerizing factor 2 [Homo sapiens]
Length = 772
Score = 33.1 bits (74), Expect = 0.39
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 45 IKGIEAGSEDIDILPNGLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRARE 99
+ G AG E+ + L GL V L+F GLH F +PG + L++ PR E
Sbjct: 686 LAGELAGQEEEEAL-EGLEVMDVFLRFSGLHLFRAVEPGLVQKFSLRDCSPRLSE 739
>gi|149944516 tet oncogene family member 3 [Homo sapiens]
Length = 1660
Score = 32.7 bits (73), Expect = 0.51
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 46 KGIEAGSEDIDILPNGLAFFSVGLKFPGLHSFAPDKPGGI---------LMMDLKEEKPR 96
+G AGSED+D L LA G+K P + P+ P + ++M+ EE+PR
Sbjct: 109 EGCSAGSEDLDTLQTALALARHGMKPPNCNCDGPECPDYLEWLEGKIKSVVMEGGEERPR 168
>gi|42476013 NHL repeat containing 2 [Homo sapiens]
Length = 726
Score = 31.2 bits (69), Expect = 1.5
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 224 GINISPDDKYIYVADILAHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSS----GDI 279
G+ +YVAD H+I V++ T N T L V + S S+ G +
Sbjct: 479 GVTWDKKRNLLYVADSYNHKIKVVDPKTK-NCTTLAGTGDTNNVTSSSFTESTFNEPGGL 537
Query: 280 WVGCHPNGQKLFVYDPNNPPSSEVLRIQNILSEKPTVTTVYANNGSVLQG 329
+G NG+ L+V D NN +++ ++ ++ +V ++ + +V+ G
Sbjct: 538 CIG--ENGELLYVADTNN----HQIKVMDLETKMVSVLPIFRSENAVVDG 581
>gi|157502171 sorting nexin 19 [Homo sapiens]
Length = 992
Score = 30.4 bits (67), Expect = 2.5
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 220 DSANGINISPDDKYIYVADILAHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDI 279
+S I+I DK I D+ A +LE ++ LE D D S+DP+ +
Sbjct: 442 NSCPEIHIDTADKEIEQGDVTASVTALLEGPEKTCPSRPSCLEKDLTNDVSSLDPTLPPV 501
Query: 280 WVGCHPNG---QKLFVYDPNNPPSSEVLRIQNI 309
+ P G F ++P + P V+ IQN+
Sbjct: 502 LLSSSPPGPLSSATFSFEPLSSPDGPVI-IQNL 533
>gi|124256489 crooked neck-like 1 protein [Homo sapiens]
Length = 848
Score = 29.6 bits (65), Expect = 4.3
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 11/88 (12%)
Query: 120 IDNDDTVY-LFVVNHPEFKNTVEIFKFEEAENSLLHLKTVKHELLPSVNDITAVGPAHFY 178
+D T+Y FV+ HP+ KN ++ +FEE H + V + G H
Sbjct: 359 VDRARTIYERFVLVHPDVKNWIKYARFEEKHAYFAHARKVYERA------VEFFGDEHM- 411
Query: 179 ATNDHYFSDPFLKYLETYLNLHWANVVY 206
D + F K+ E V+Y
Sbjct: 412 ---DEHLYVAFAKFEENQKEFERVRVIY 436
>gi|23510338 ubiquitin-activating enzyme E1 [Homo sapiens]
Length = 1058
Score = 29.3 bits (64), Expect = 5.6
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 11/67 (16%)
Query: 285 PNGQKLFVYDPNNPPSSEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGT 344
P +K V P+ P S Q++LSE P+V T NG GS A + +G
Sbjct: 5 PLSKKRRVSGPDPKPGSNCSPAQSVLSEVPSVPT----NGMAKNGSE-ADIDEG------ 53
Query: 345 LYHRALY 351
LY R LY
Sbjct: 54 LYSRQLY 60
>gi|23510340 ubiquitin-activating enzyme E1 [Homo sapiens]
Length = 1058
Score = 29.3 bits (64), Expect = 5.6
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 11/67 (16%)
Query: 285 PNGQKLFVYDPNNPPSSEVLRIQNILSEKPTVTTVYANNGSVLQGSSVASVYDGKLLIGT 344
P +K V P+ P S Q++LSE P+V T NG GS A + +G
Sbjct: 5 PLSKKRRVSGPDPKPGSNCSPAQSVLSEVPSVPT----NGMAKNGSE-ADIDEG------ 53
Query: 345 LYHRALY 351
LY R LY
Sbjct: 54 LYSRQLY 60
>gi|24308201 chromosome 20 open reading frame 3 [Homo sapiens]
Length = 416
Score = 29.3 bits (64), Expect = 5.6
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 211 EVKVVAEGFDSANGINISPDDKYIYVAD-ILAHEIHVLEKHTNMNLTQLKVLELDTLVDN 269
EVKV+ + NG+ +SP + ++ VA+ +A V L V + DN
Sbjct: 248 EVKVLLDQLRFPNGVQLSPAEDFVLVAETTMARIRRVYVSGLMKGGADLFVENMPGFPDN 307
Query: 270 LSIDPSSGDIWVG 282
+ SSG WVG
Sbjct: 308 IR-PSSSGGYWVG 319
>gi|4826724 zygin 1 isoform 1 [Homo sapiens]
Length = 392
Score = 28.9 bits (63), Expect = 7.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 149 ENSLLHLKTVKHELLPSVNDITAVGPAHFYATNDHYFSDPFLKYLETY 196
E L+ L +L PS ++ P FY ++ H+ DP L LE +
Sbjct: 2 EAPLVSLDEEFEDLRPSCSEDPEEKPQCFYGSSPHHLEDPSLSELENF 49
>gi|12025680 zygin 1 isoform 2 [Homo sapiens]
Length = 104
Score = 28.9 bits (63), Expect = 7.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 149 ENSLLHLKTVKHELLPSVNDITAVGPAHFYATNDHYFSDPFLKYLETY 196
E L+ L +L PS ++ P FY ++ H+ DP L LE +
Sbjct: 2 EAPLVSLDEEFEDLRPSCSEDPEEKPQCFYGSSPHHLEDPSLSELENF 49
>gi|226442779 jumonji domain containing 1A [Homo sapiens]
Length = 1321
Score = 28.9 bits (63), Expect = 7.3
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 283 CHPNGQKLFVYDPNNPPSSEVLRIQNILSEKPTVTTVYANNGSVLQGSSV 332
C KLF + P S E L+ ++ EKPT+ V N SVL+ ++V
Sbjct: 753 CSNRQFKLF----SKPASKEDLKQTSLAGEKPTLGAVLQQNPSVLEPAAV 798
>gi|20357522 jumonji domain containing 1A [Homo sapiens]
Length = 1321
Score = 28.9 bits (63), Expect = 7.3
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 283 CHPNGQKLFVYDPNNPPSSEVLRIQNILSEKPTVTTVYANNGSVLQGSSV 332
C KLF + P S E L+ ++ EKPT+ V N SVL+ ++V
Sbjct: 753 CSNRQFKLF----SKPASKEDLKQTSLAGEKPTLGAVLQQNPSVLEPAAV 798
>gi|71773106 adaptor-related protein complex 2, beta 1 subunit
isoform a [Homo sapiens]
Length = 951
Score = 28.9 bits (63), Expect = 7.3
Identities = 64/282 (22%), Positives = 108/282 (38%), Gaps = 52/282 (18%)
Query: 77 FAPDKPGGI--LMMDLKEEKPRARELRISR-------GFDLASFNPHGISTF----IDND 123
F +K G I L +L EK R+ + + G D++S P ++ ++
Sbjct: 7 FTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELK 66
Query: 124 DTVYLFVVNHPEFKNTVEIFKFE------EAENSLLHLKTVKHELLPSVNDITAVGPAHF 177
VYL+++N+ + + + I E N L+ V+ V+ IT
Sbjct: 67 KLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKIT------- 119
Query: 178 YATNDHYFSDPFLKYL---ETYLNLHWANVV--YYSPNEVKVVAEGF-DSANGINISPDD 231
Y +P K L + Y+ A V + N V +GF DS ++ D
Sbjct: 120 -----EYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLR--DLIADS 172
Query: 232 KYIYVADILAHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWV-GCHPNGQKL 290
+ VA+ +A + E H N NL L ++ L+ L+ G I++ C N
Sbjct: 173 NPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSN---- 228
Query: 291 FVYDPNNPPSSEVLRIQNILSEKPTVTTVYANNGSVLQGSSV 332
Y+P + R + E+ T +AN+ VL V
Sbjct: 229 --YNPKDD------REAQSICERVTPRLSHANSAVVLSAVKV 262
>gi|4557469 adaptor-related protein complex 2, beta 1 subunit
isoform b [Homo sapiens]
Length = 937
Score = 28.9 bits (63), Expect = 7.3
Identities = 64/282 (22%), Positives = 108/282 (38%), Gaps = 52/282 (18%)
Query: 77 FAPDKPGGI--LMMDLKEEKPRARELRISR-------GFDLASFNPHGISTF----IDND 123
F +K G I L +L EK R+ + + G D++S P ++ ++
Sbjct: 7 FTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELK 66
Query: 124 DTVYLFVVNHPEFKNTVEIFKFE------EAENSLLHLKTVKHELLPSVNDITAVGPAHF 177
VYL+++N+ + + + I E N L+ V+ V+ IT
Sbjct: 67 KLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKIT------- 119
Query: 178 YATNDHYFSDPFLKYL---ETYLNLHWANVV--YYSPNEVKVVAEGF-DSANGINISPDD 231
Y +P K L + Y+ A V + N V +GF DS ++ D
Sbjct: 120 -----EYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLR--DLIADS 172
Query: 232 KYIYVADILAHEIHVLEKHTNMNLTQLKVLELDTLVDNLSIDPSSGDIWV-GCHPNGQKL 290
+ VA+ +A + E H N NL L ++ L+ L+ G I++ C N
Sbjct: 173 NPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSN---- 228
Query: 291 FVYDPNNPPSSEVLRIQNILSEKPTVTTVYANNGSVLQGSSV 332
Y+P + R + E+ T +AN+ VL V
Sbjct: 229 --YNPKDD------REAQSICERVTPRLSHANSAVVLSAVKV 262
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.139 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,453,645
Number of Sequences: 37866
Number of extensions: 599383
Number of successful extensions: 1221
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1209
Number of HSP's gapped (non-prelim): 19
length of query: 354
length of database: 18,247,518
effective HSP length: 103
effective length of query: 251
effective length of database: 14,347,320
effective search space: 3601177320
effective search space used: 3601177320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.