Guide to the Human Genome
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Name: PON1 Sequence: fasta or formatted (355aa) NCBI GI: 19923106
Description:

paraoxonase 1 precursor

Referenced in:

Xenobiotic Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         18           1
 C cysteine            0.8          3           1
 D aspartate           4.8         17           1
 E glutamate           7.3         26           3
 F phenylalanine       4.5         16           2
 G glycine             6.8         24           1
 H histidine           3.4         12           1
 I isoleucine          5.4         19           1
 K lysine              5.6         20           1
 L leucine            13.0         46           2
 M methionine          1.7          6           1
 N asparagine          6.5         23           1
 P proline             5.6         20           2
 Q glutamine           2.3          8           1
 R arginine            1.7          6           1
 S serine              6.8         24           2
 T threonine           5.4         19           1
 V valine              7.6         27           2
 W tryptophan          1.1          4           1
 Y tyrosine            4.8         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   paraoxonase 1 precursor 
PON2                  0.675   paraoxonase 2 isoform 1 
PON2                  0.636   paraoxonase 2 isoform 2 
PON3                  0.615   paraoxonase 3 
TET3                  0.009   tet oncogene family member 3 
NOS3                  0.007   nitric oxide synthase 3 isoform 1 
C20orf3               0.007   chromosome 20 open reading frame 3 
BIRC6                 0.006   baculoviral IAP repeat-containing 6 
CCT3                  0.006   chaperonin containing TCP1, subunit 3 isoform b [Hom...
CCT3                  0.006   chaperonin containing TCP1, subunit 3 isoform a [Hom...
RNF20                 0.004   ring finger protein 20 
SLC45A4               0.004   solute carrier family 45, member 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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