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Search of human proteins with 63259329
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|63259329 transmembrane protein 184B [Homo sapiens]
(407 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|63259329 transmembrane protein 184B [Homo sapiens] 828 0.0
gi|148276981 transmembrane protein 184A [Homo sapiens] 521 e-148
gi|190358512 transmembrane protein 184C [Homo sapiens] 186 3e-47
gi|72534680 sex comb on midleg 1 isoform 1 [Homo sapiens] 32 1.3
gi|6912642 sex comb on midleg 1 isoform 2 [Homo sapiens] 32 1.3
gi|118582267 equilibrative nucleoside transporter 1 [Homo sapiens] 31 1.8
gi|118582265 equilibrative nucleoside transporter 1 [Homo sapiens] 31 1.8
gi|118582262 equilibrative nucleoside transporter 1 [Homo sapiens] 31 1.8
gi|118582260 equilibrative nucleoside transporter 1 [Homo sapiens] 31 1.8
gi|4826716 equilibrative nucleoside transporter 1 [Homo sapiens] 31 1.8
gi|169205253 PREDICTED: hypothetical protein [Homo sapiens] 31 1.8
gi|239756720 PREDICTED: hypothetical protein XP_002345024 [Homo ... 29 6.7
gi|239751215 PREDICTED: hypothetical protein XP_002347750 [Homo ... 29 6.7
gi|239745705 PREDICTED: hypothetical protein XP_002343521 [Homo ... 29 6.7
gi|82546824 forkhead box K1 [Homo sapiens] 29 8.7
>gi|63259329 transmembrane protein 184B [Homo sapiens]
Length = 407
Score = 828 bits (2138), Expect = 0.0
Identities = 407/407 (100%), Positives = 407/407 (100%)
Query: 1 MTVRGDVLAPDPASPTTAAASPSVSVIPEGSPTAMEQPVFLMTTAAQAISGFFVWTALLI 60
MTVRGDVLAPDPASPTTAAASPSVSVIPEGSPTAMEQPVFLMTTAAQAISGFFVWTALLI
Sbjct: 1 MTVRGDVLAPDPASPTTAAASPSVSVIPEGSPTAMEQPVFLMTTAAQAISGFFVWTALLI 60
Query: 61 TCHQIYMHLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVRDCYEA 120
TCHQIYMHLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVRDCYEA
Sbjct: 61 TCHQIYMHLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVRDCYEA 120
Query: 121 LVIYNFLSLCYEYLGGESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGFLRFCKQATLQF 180
LVIYNFLSLCYEYLGGESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGFLRFCKQATLQF
Sbjct: 121 LVIYNFLSLCYEYLGGESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGFLRFCKQATLQF 180
Query: 181 CVVKPLMAVSTVVLQAFGKYRDGDFDVTSGYLYVTIIYNISVSLALYALFLFYFATRELL 240
CVVKPLMAVSTVVLQAFGKYRDGDFDVTSGYLYVTIIYNISVSLALYALFLFYFATRELL
Sbjct: 181 CVVKPLMAVSTVVLQAFGKYRDGDFDVTSGYLYVTIIYNISVSLALYALFLFYFATRELL 240
Query: 241 SPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAIPKIHSARVSVGEGTVAAGYQDFIIC 300
SPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAIPKIHSARVSVGEGTVAAGYQDFIIC
Sbjct: 241 SPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAIPKIHSARVSVGEGTVAAGYQDFIIC 300
Query: 301 VEMFFAALALRHAFTYKVYADKRLDAQGRCAPMKSISSSLKETMNPHDIVQDAIHNFSPA 360
VEMFFAALALRHAFTYKVYADKRLDAQGRCAPMKSISSSLKETMNPHDIVQDAIHNFSPA
Sbjct: 301 VEMFFAALALRHAFTYKVYADKRLDAQGRCAPMKSISSSLKETMNPHDIVQDAIHNFSPA 360
Query: 361 YQQYTQQSTLEPGPTWRGGAHGLSRSHSLSGARDNEKTLLLSSDDEF 407
YQQYTQQSTLEPGPTWRGGAHGLSRSHSLSGARDNEKTLLLSSDDEF
Sbjct: 361 YQQYTQQSTLEPGPTWRGGAHGLSRSHSLSGARDNEKTLLLSSDDEF 407
>gi|148276981 transmembrane protein 184A [Homo sapiens]
Length = 413
Score = 521 bits (1343), Expect = e-148
Identities = 258/400 (64%), Positives = 316/400 (79%), Gaps = 12/400 (3%)
Query: 10 PDPASPTTAAASPSVSVIPEGSPTAMEQPVFLMTTAAQAISGFFVWTALLITCHQIYMHL 69
P P+ P A P + + S A +FL + A+ +SG FVWTAL++TCHQIY+HL
Sbjct: 21 PQPSPPPAVPAGPQMDHMGNSSQGAPW--LFLTSALARGVSGIFVWTALVLTCHQIYLHL 78
Query: 70 RCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVRDCYEALVIYNFLSL 129
R Y+ P EQRYI+R+L IVPIYAFDSWLSLL + QYYVYF +VRDCYEA VIY+FLSL
Sbjct: 79 RSYTVPQEQRYIIRLLLIVPIYAFDSWLSLLLLGDHQYYVYFDSVRDCYEAFVIYSFLSL 138
Query: 130 CYEYLGGESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGFLRFCKQATLQFCVVKPLMAV 189
C++YLGGE +IM+EIRGKPI+SSC+YGTCCL G TYSIGFLRFCKQATLQFC+VKP+MAV
Sbjct: 139 CFQYLGGEGAIMAEIRGKPIKSSCLYGTCCLRGMTYSIGFLRFCKQATLQFCLVKPVMAV 198
Query: 190 STVVLQAFGKYRDGDFDVTSGYLYVTIIYNISVSLALYALFLFYFATRELLSPYSPVLKF 249
+T++LQAFGKY DGDF+V SGYLYVT+IYN SVSLALYALFLFYF TRELL P+ PVLKF
Sbjct: 199 TTIILQAFGKYHDGDFNVRSGYLYVTLIYNASVSLALYALFLFYFTTRELLRPFQPVLKF 258
Query: 250 FMVKSVIFLSFWQGMLLAILEKCGAIPKIH-SARVSVGEGTVAAGYQDFIICVEMFFAAL 308
+K+VIFLSFWQG+LLAILE+CG IP++ S +G GT+AAGYQ+FIICVEM FA++
Sbjct: 259 LTIKAVIFLSFWQGLLLAILERCGVIPEVETSGGNKLGAGTLAAGYQNFIICVEMLFASV 318
Query: 309 ALRHAFTYKVYADKRLDAQGRCAPMKSISSSLKETMNPHDIVQDAIHNFSPAYQQYTQQS 368
ALR+AF +VYA+K+ ++ APM+SISS ++ET++P DIVQDAIHNFSPAYQ YTQQ+
Sbjct: 319 ALRYAFPCQVYAEKKENSPAPPAPMQSISSGIRETVSPQDIVQDAIHNFSPAYQHYTQQA 378
Query: 369 TLE---PGPTWRGGAHGLSRSHSLSGARDNEKTLLLSSDD 405
T E PG GG+ G +S SL EK +L+ S+D
Sbjct: 379 THEAPRPGTHPSGGSGGSRKSRSL------EKRMLIPSED 412
>gi|190358512 transmembrane protein 184C [Homo sapiens]
Length = 438
Score = 186 bits (473), Expect = 3e-47
Identities = 108/287 (37%), Positives = 155/287 (54%), Gaps = 6/287 (2%)
Query: 44 TAAQAISGFFVWTALLITCHQIYMHLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFT 103
T A I+G F+ + I+ I HL Y+ P Q+ I+RIL++VPIY+ DSW++L +
Sbjct: 46 TKAWFIAGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIALKY-- 103
Query: 104 NDQYYVYFGTVRDCYEALVIYNFLSLCYEYLGGESSIMSEIRGKPIESSCMYGTCCLWGK 163
+Y T R+CYEA VIYNF+ YL + I + CC
Sbjct: 104 -PGIAIYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLILEAKDQQKHFPPLCCCPPW 162
Query: 164 TYSIGFLRFCKQATLQFCVVKPLMAVSTVVLQAFGKYRDGDFDVTSGYLYVTIIYNISVS 223
L CK LQ+ VV+P + ++ + G Y +G+F ++ + Y+ II N+S
Sbjct: 163 AMGEVLLFRCKLGVLQYTVVRPFTTIVALICELLGIYDEGNFSFSNAWTYLVIINNMSQL 222
Query: 224 LALYALFLFYFATRELLSPYSPVLKFFMVKSVIFLSFWQGMLLAILEKCGAIPKIHSARV 283
A+Y L LFY +E LSP PV KF VK V+F+SFWQ +++A+L K G I + H+
Sbjct: 223 FAMYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQAVVIALLVKVGVISEKHTWEW 282
Query: 284 SVGEGTVAAGYQDFIICVEMFFAALALRHAFTYKVYADKRLDAQGRC 330
E VA G QDFIIC+EMF AA+A + F+YK Y + +G C
Sbjct: 283 QTVE-AVATGLQDFIICIEMFLAAIAHHYTFSYKPYVQEA--EEGSC 326
>gi|72534680 sex comb on midleg 1 isoform 1 [Homo sapiens]
Length = 660
Score = 31.6 bits (70), Expect = 1.3
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 7 VLAPDPASPTTAAASPSVSVIPEGSPT----AMEQP 38
+L P PASPTT+ P S +P+ + T AM+ P
Sbjct: 322 LLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQAP 357
>gi|6912642 sex comb on midleg 1 isoform 2 [Homo sapiens]
Length = 591
Score = 31.6 bits (70), Expect = 1.3
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 7 VLAPDPASPTTAAASPSVSVIPEGSPT----AMEQP 38
+L P PASPTT+ P S +P+ + T AM+ P
Sbjct: 275 LLNPPPASPTTSTPEPDTSTVPQDAATIPSSAMQAP 310
>gi|118582267 equilibrative nucleoside transporter 1 [Homo sapiens]
Length = 456
Score = 31.2 bits (69), Expect = 1.8
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 205 FDVTSGYLYVTIIYNISVSLALYALFLFYFATRELLSPYSPVLKFF---MVKSVIFLSFW 261
F + +L+ I ++ + +L A+ L + T L+ L FF M+K V+ SF
Sbjct: 95 FTYLNSFLHQRIPQSVRILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLINSFG 154
Query: 262 QGMLLAILEKCGAIPKIHSARVSVGEGTVAAGYQDFIIC 300
+ ++ G +P ++A + G+G +IC
Sbjct: 155 AILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMIC 193
>gi|118582265 equilibrative nucleoside transporter 1 [Homo sapiens]
Length = 456
Score = 31.2 bits (69), Expect = 1.8
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 205 FDVTSGYLYVTIIYNISVSLALYALFLFYFATRELLSPYSPVLKFF---MVKSVIFLSFW 261
F + +L+ I ++ + +L A+ L + T L+ L FF M+K V+ SF
Sbjct: 95 FTYLNSFLHQRIPQSVRILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLINSFG 154
Query: 262 QGMLLAILEKCGAIPKIHSARVSVGEGTVAAGYQDFIIC 300
+ ++ G +P ++A + G+G +IC
Sbjct: 155 AILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMIC 193
>gi|118582262 equilibrative nucleoside transporter 1 [Homo sapiens]
Length = 456
Score = 31.2 bits (69), Expect = 1.8
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 205 FDVTSGYLYVTIIYNISVSLALYALFLFYFATRELLSPYSPVLKFF---MVKSVIFLSFW 261
F + +L+ I ++ + +L A+ L + T L+ L FF M+K V+ SF
Sbjct: 95 FTYLNSFLHQRIPQSVRILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLINSFG 154
Query: 262 QGMLLAILEKCGAIPKIHSARVSVGEGTVAAGYQDFIIC 300
+ ++ G +P ++A + G+G +IC
Sbjct: 155 AILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMIC 193
>gi|118582260 equilibrative nucleoside transporter 1 [Homo sapiens]
Length = 456
Score = 31.2 bits (69), Expect = 1.8
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 205 FDVTSGYLYVTIIYNISVSLALYALFLFYFATRELLSPYSPVLKFF---MVKSVIFLSFW 261
F + +L+ I ++ + +L A+ L + T L+ L FF M+K V+ SF
Sbjct: 95 FTYLNSFLHQRIPQSVRILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLINSFG 154
Query: 262 QGMLLAILEKCGAIPKIHSARVSVGEGTVAAGYQDFIIC 300
+ ++ G +P ++A + G+G +IC
Sbjct: 155 AILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMIC 193
>gi|4826716 equilibrative nucleoside transporter 1 [Homo sapiens]
Length = 456
Score = 31.2 bits (69), Expect = 1.8
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 205 FDVTSGYLYVTIIYNISVSLALYALFLFYFATRELLSPYSPVLKFF---MVKSVIFLSFW 261
F + +L+ I ++ + +L A+ L + T L+ L FF M+K V+ SF
Sbjct: 95 FTYLNSFLHQRIPQSVRILGSLVAILLVFLITAILVKVQLDALPFFVITMIKIVLINSFG 154
Query: 262 QGMLLAILEKCGAIPKIHSARVSVGEGTVAAGYQDFIIC 300
+ ++ G +P ++A + G+G +IC
Sbjct: 155 AILQGSLFGLAGLLPASYTAPIMSGQGLAGFFASVAMIC 193
>gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]
Length = 3859
Score = 31.2 bits (69), Expect = 1.8
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 9 APDPASPTTAAASPSVSVIPEGSP----TAMEQPVFLMTTA 45
A DP P T A SP VSV P SP T + PV +T+A
Sbjct: 1342 ADDPIVPVTPADSPIVSVTPAESPAIPVTPADSPVVPVTSA 1382
Score = 30.8 bits (68), Expect = 2.3
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 9 APDPASPTTAAASPSVSVIPEGSP----TAMEQPVFLMTTA 45
A DP P T+A SP VSV P SP T + PV + +A
Sbjct: 1932 ADDPIVPVTSADSPIVSVTPADSPVFPVTPADSPVIPVASA 1972
Score = 30.4 bits (67), Expect = 3.0
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 9 APDPASPTTAAASPSVSVIPEGSP----TAMEQPVFLMTTA 45
A P P T+A SP V V P SP T + PVF +T+A
Sbjct: 2241 ADGPVVPVTSADSPLVPVTPGDSPVVPVTPADSPVFPVTSA 2281
Score = 29.6 bits (65), Expect = 5.1
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 12 PASPTTAAASPSVSVIPEGSP----TAMEQPVFLMTTA 45
PA P T+A SP V VIP SP T + P+ +T A
Sbjct: 798 PAVPVTSADSPFVPVIPADSPVVPVTPADDPIVPVTPA 835
Score = 28.9 bits (63), Expect = 8.7
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 9 APDPASPTTAAASPSVSVIPEGSP----TAMEQPVFLMTTA 45
A P P T A P VSV P SP T+ + P+ +TTA
Sbjct: 393 ADSPFVPVTPADDPIVSVTPADSPVVPVTSADSPLIPVTTA 433
Score = 28.9 bits (63), Expect = 8.7
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 9 APDPASPTTAAASPSVSVIPEGSP----TAMEQPVFLMTTAAQAIS 50
A P P T A P VSV P SP T + PV +T+A + +S
Sbjct: 984 ADSPFVPVTPADDPIVSVTPAESPAIPVTQADSPVVPVTSADRPVS 1029
Score = 28.9 bits (63), Expect = 8.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 9 APDPASPTTAAASPSVSVIPEGSPTAMEQPV 39
A P P T+A SP V V P SP + PV
Sbjct: 1253 ADSPVVPVTSADSPVVPVTPADSPVILVTPV 1283
>gi|239756720 PREDICTED: hypothetical protein XP_002345024 [Homo
sapiens]
Length = 303
Score = 29.3 bits (64), Expect = 6.7
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 258 LSFWQGMLLAILEKC-GAIPKIHSARVSVGEGTVAAGYQD 296
L W+ + LA+L++C G +P H A +VG + G ++
Sbjct: 112 LGSWRSLALAVLQRCRGQVPADHCAAEAVGPWRLGPGAKE 151
>gi|239751215 PREDICTED: hypothetical protein XP_002347750 [Homo
sapiens]
Length = 303
Score = 29.3 bits (64), Expect = 6.7
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 258 LSFWQGMLLAILEKC-GAIPKIHSARVSVGEGTVAAGYQD 296
L W+ + LA+L++C G +P H A +VG + G ++
Sbjct: 112 LGSWRSLALAVLQRCRGQVPADHCAAEAVGPWRLGPGAKE 151
>gi|239745705 PREDICTED: hypothetical protein XP_002343521 [Homo
sapiens]
Length = 303
Score = 29.3 bits (64), Expect = 6.7
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 258 LSFWQGMLLAILEKC-GAIPKIHSARVSVGEGTVAAGYQD 296
L W+ + LA+L++C G +P H A +VG + G ++
Sbjct: 112 LGSWRSLALAVLQRCRGQVPADHCAAEAVGPWRLGPGAKE 151
>gi|82546824 forkhead box K1 [Homo sapiens]
Length = 733
Score = 28.9 bits (63), Expect = 8.7
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 12 PASPTTAAASPSVSVIPEGSPTAMEQPVFLMTTAAQAIS 50
PA+ TTA+AS S + PE + +E+P +TT A I+
Sbjct: 684 PATATTASASASSTGEPEVKRSRVEEPSGAVTTPAGVIA 722
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.138 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,931,393
Number of Sequences: 37866
Number of extensions: 647196
Number of successful extensions: 3137
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3043
Number of HSP's gapped (non-prelim): 94
length of query: 407
length of database: 18,247,518
effective HSP length: 105
effective length of query: 302
effective length of database: 14,271,588
effective search space: 4310019576
effective search space used: 4310019576
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Table of Contents |
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.