Search of human proteins with 62821776

Search of human proteins with 62821776

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|62821776 hypothetical protein LOC57613 [Homo sapiens]
         (622 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|62821776 hypothetical protein LOC57613 [Homo sapiens]             1236   0.0  
gi|14042970 integrin alpha FG-GAP repeat containing 3 [Homo sapi...   184   2e-46
gi|148612838 hypothetical protein LOC158358 [Homo sapiens]             33   1.0  
gi|89886475 hypothetical protein LOC163183 [Homo sapiens]              32   2.3  
gi|193083163 roundabout, axon guidance receptor, homolog 2 isofo...    30   5.1  
gi|61888896 roundabout, axon guidance receptor, homolog 2 isofor...    30   5.1  
gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]      30   5.1  
gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens]     30   5.1  
gi|166795264 AE binding protein 2 isoform b [Homo sapiens]             30   5.1  
gi|166795262 AE binding protein 2 isoform a [Homo sapiens]             30   5.1  
gi|13540523 nucleosomal binding protein 1 [Homo sapiens]               30   6.6  
gi|66932902 SREBF chaperone protein [Homo sapiens]                     30   8.7  
gi|39995084 integrator complex subunit 3 [Homo sapiens]                30   8.7  

>gi|62821776 hypothetical protein LOC57613 [Homo sapiens]
          Length = 622

 Score = 1236 bits (3198), Expect = 0.0
 Identities = 622/622 (100%), Positives = 622/622 (100%)

Query: 1   MATVLSRALKLPGKKSPDLGEYDPLTQADSDESEDDLVLNLQKNGGVKNGKSPLGEAPEP 60
           MATVLSRALKLPGKKSPDLGEYDPLTQADSDESEDDLVLNLQKNGGVKNGKSPLGEAPEP
Sbjct: 1   MATVLSRALKLPGKKSPDLGEYDPLTQADSDESEDDLVLNLQKNGGVKNGKSPLGEAPEP 60

Query: 61  DSDAEVAEAAKPHLSEVTTEGYPSEPLGGLEQKAASSLVSYVRTSVFLLTLGISMILVLL 120
           DSDAEVAEAAKPHLSEVTTEGYPSEPLGGLEQKAASSLVSYVRTSVFLLTLGISMILVLL
Sbjct: 61  DSDAEVAEAAKPHLSEVTTEGYPSEPLGGLEQKAASSLVSYVRTSVFLLTLGISMILVLL 120

Query: 121 CAFLIPCPPRDLHSTWSRHLGSQGGGDLSPLELADVNGDGLRDVLLSFVMSRNGSAVGVS 180
           CAFLIPCPPRDLHSTWSRHLGSQGGGDLSPLELADVNGDGLRDVLLSFVMSRNGSAVGVS
Sbjct: 121 CAFLIPCPPRDLHSTWSRHLGSQGGGDLSPLELADVNGDGLRDVLLSFVMSRNGSAVGVS 180

Query: 181 RPAANLVCLSGMNGSTLWSSLLPEEARDITCLELMPGSLAETICLVTGTHKMLSAFNATS 240
           RPAANLVCLSGMNGSTLWSSLLPEEARDITCLELMPGSLAETICLVTGTHKMLSAFNATS
Sbjct: 181 RPAANLVCLSGMNGSTLWSSLLPEEARDITCLELMPGSLAETICLVTGTHKMLSAFNATS 240

Query: 241 GKAIWTLNPNYLSNGTLAAPVVVLPDLDEDGVRDLVVLAIGELQPDLCFLLVSGRTGNPV 300
           GKAIWTLNPNYLSNGTLAAPVVVLPDLDEDGVRDLVVLAIGELQPDLCFLLVSGRTGNPV
Sbjct: 241 GKAIWTLNPNYLSNGTLAAPVVVLPDLDEDGVRDLVVLAIGELQPDLCFLLVSGRTGNPV 300

Query: 301 GRPVKYNIVGVGNLIGPQVYITTNGAVYILFGFGNIQAVALRDIFVQAQNRDSSPPSLQI 360
           GRPVKYNIVGVGNLIGPQVYITTNGAVYILFGFGNIQAVALRDIFVQAQNRDSSPPSLQI
Sbjct: 301 GRPVKYNIVGVGNLIGPQVYITTNGAVYILFGFGNIQAVALRDIFVQAQNRDSSPPSLQI 360

Query: 361 EEPEWEKRRSINLSELIDVYSDGVELLQMVKAPDSNCSNLLITTRQSLVLLRGQNLTPYW 420
           EEPEWEKRRSINLSELIDVYSDGVELLQMVKAPDSNCSNLLITTRQSLVLLRGQNLTPYW
Sbjct: 361 EEPEWEKRRSINLSELIDVYSDGVELLQMVKAPDSNCSNLLITTRQSLVLLRGQNLTPYW 420

Query: 421 ALRLQGLRSQPTPGYFTDDQTLDFLLQIQDGVGMKKMMVVDGDSGSIVWSYRAPCHMKET 480
           ALRLQGLRSQPTPGYFTDDQTLDFLLQIQDGVGMKKMMVVDGDSGSIVWSYRAPCHMKET
Sbjct: 421 ALRLQGLRSQPTPGYFTDDQTLDFLLQIQDGVGMKKMMVVDGDSGSIVWSYRAPCHMKET 480

Query: 481 PATSAVTSDQKSVFLFWAEGLSAASPNSDIILGTEPPSLHHLYLLHPAFPSILLDLANTT 540
           PATSAVTSDQKSVFLFWAEGLSAASPNSDIILGTEPPSLHHLYLLHPAFPSILLDLANTT
Sbjct: 481 PATSAVTSDQKSVFLFWAEGLSAASPNSDIILGTEPPSLHHLYLLHPAFPSILLDLANTT 540

Query: 541 GTVTASEVGINDLWKDAFYVTRTTGPSSEGHPAALVVSKLSLRWALMEGQMAQLQESTPK 600
           GTVTASEVGINDLWKDAFYVTRTTGPSSEGHPAALVVSKLSLRWALMEGQMAQLQESTPK
Sbjct: 541 GTVTASEVGINDLWKDAFYVTRTTGPSSEGHPAALVVSKLSLRWALMEGQMAQLQESTPK 600

Query: 601 IGRGELRRFLSRIKFVEAPYEI 622
           IGRGELRRFLSRIKFVEAPYEI
Sbjct: 601 IGRGELRRFLSRIKFVEAPYEI 622


>gi|14042970 integrin alpha FG-GAP repeat containing 3 [Homo
           sapiens]
          Length = 552

 Score =  184 bits (468), Expect = 2e-46
 Identities = 146/565 (25%), Positives = 261/565 (46%), Gaps = 32/565 (5%)

Query: 61  DSDAEVAEAAKPHLSEVTTEGYPSEPLGGLEQKAASSLVSYVRTSVFLLTLGISMILVLL 120
           D +AE+              G PS+    ++     S +S  R + F L+L + + +V +
Sbjct: 6   DLEAEIHPLKNEERKSQENLGNPSKNEDNVKSAPPQSRLSRCRAAAFFLSLFLCLFVVFV 65

Query: 121 CAFLIPCPPRDLHSTWSRHLGSQGGGDLSPLELADVNGDGLRDVLLSFV-------MSRN 173
            +F+IPCP R       R +          L + D+NGD ++DVL  +         SR+
Sbjct: 66  VSFVIPCPDRPASQRMWR-IDYSAAVIYDFLAVDDINGDRIQDVLFLYKNTNSSNNFSRS 124

Query: 174 GSAVGVSRPAANLVCLSGMNGSTLWSSLLPEEARDITCLELMP-GSLAETICLVTGTHKM 232
               G S P      +SG NGSTLW   + ++   + C    P GS A + C++ G    
Sbjct: 125 CVDEGFSSPCTFAAAVSGANGSTLWERPVAQDVALVECAVPQPRGSEAPSACILVGRPSS 184

Query: 233 LSAFNATSGKAIWTLNPNYLSNGTLAAPVVVLPDLDEDGVRDLVVLAIGELQPDLCFLLV 292
             A N  +G+ +W  + ++  N ++ +P++ +PD+D DG  DL+VL   + + ++   L 
Sbjct: 185 FIAVNLFTGETLWNHSSSFSGNASILSPLLQVPDVDGDGAPDLLVLT--QEREEVSGHLY 242

Query: 293 SGRTGNPVGRPVKYNIVGVGNLIGPQVYITTNGAVYILFG-FGNIQAVALRDIFVQAQNR 351
           SG TG+ +G       +GV    G  +++T  GA YILF    ++   +++ ++ +    
Sbjct: 243 SGSTGHQIG---LRGSLGVDGESGFLLHVTRTGAHYILFPCASSLCGCSVKGLYEKVTGS 299

Query: 352 DSSPPSLQIEEPEWEKRRSINLSELIDVYSDGVELLQMVKAPDSNCSNLLITTRQSLVLL 411
                S    +P WE   +     ++   S  V  L  V  P +  +++L+   ++ VLL
Sbjct: 300 GGPFKS----DPHWESMLNATTRRMLSHSSGAVRYLMHV--PGNAGADVLLVGSEAFVLL 353

Query: 412 RGQNLTPYWALRLQGLRSQPTPGYFTDDQTLDFLLQIQDGVGM-KKMMVVDGDSGSIVWS 470
            GQ LTP W  +   +  +P  G +  D      + +++G G  ++++ +D  +G+++ S
Sbjct: 354 DGQELTPRWTPKAAHVLRKPIFGRYKPD---TLAVAVENGTGTDRQILFLDLGTGAVLCS 410

Query: 471 YRAPCHMKETPATSAVTSDQKSVFLFWAEGLSAASPNSDIILGTEPPSLHHLYLLHPAFP 530
              P       + S  T+D +S F FW  GL      S+   G    + H LY+ HP  P
Sbjct: 411 LALPSLPGGPLSASLPTADHRSAFFFW--GLHELGSTSETETG---EARHSLYMFHPTLP 465

Query: 531 SILLDLANTTGTVTASEVGINDLWKDAFYVTRTTGPSSEGHPAALVVSKLSLRWALMEGQ 590
            +LL+LAN +  + A +  + +  + A Y+   TGP+    P  + V K  +R  +   +
Sbjct: 466 RVLLELANVSTHIVAFDAVLFEPSRHAAYIL-LTGPADSEAPGLVSVIKHKVRDLVPSSR 524

Query: 591 MAQLQESTPKIGRGELRRFLSRIKF 615
           + +L E  P   +    RF SR+++
Sbjct: 525 VVRLGEGGPDSDQAIRDRF-SRLRY 548


>gi|148612838 hypothetical protein LOC158358 [Homo sapiens]
          Length = 2103

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 7/95 (7%)

Query: 451  GVGMKKMMVVDGDSGSIVWSYRAPCHMKETPA-TSAVTSDQKSVFLFWAEGLSAASPN-- 507
            G  ++K+M+V   S   + S      +  TPA TS   S QK VF+        ++P   
Sbjct: 1467 GTPVQKLMLVSAPS---ILSSGNGTAINMTPALTSTGVSAQKLVFINAPVPSGTSTPTLV 1523

Query: 508  SDIILGTEPPSLHHLYLLHPAFPSILLDLANTTGT 542
            ++ +  T PP LH  Y+  P  P I+L + +T GT
Sbjct: 1524 AESLKQTLPPPLHKAYVKTPEQPQIVL-IPSTVGT 1557


>gi|89886475 hypothetical protein LOC163183 [Homo sapiens]
          Length = 404

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 13/119 (10%)

Query: 2   ATVLSRALKLPGKKSPDLGEYDPLTQADSDESEDDLV---LNLQKNGGVKNGKSPLGEAP 58
           A  L    +L G++ P  G    L +AD+  S  D++   L  QK    ++ +  L   P
Sbjct: 266 ARTLGVPCELCGQRGPQ-GRGQGLEEADTSHSRQDMLESGLGHQKRLA-RHQRHSLLRKP 323

Query: 59  EPDSDAEVAEAAKPHLSEVTTEGYPSEPLGGLEQKAASSLVSYVRTSVFLLTLGISMIL 117
           +     +    A PHL +V  EG P  P     Q     L+ ++   +FLL +G   +L
Sbjct: 324 Q-----DKKRQASPHLQDVRLEGNPGAPDPASRQPLTFLLILFL---LFLLLVGAMFLL 374


>gi|193083163 roundabout, axon guidance receptor, homolog 2 isoform
           ROBO2a [Homo sapiens]
          Length = 1394

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%)

Query: 9   LKLPGKKSPDLGEYDPLTQADSDESEDDLVLNLQKNGGVKNGKSPLGEAPEPDSDAEVAE 68
           L++   +  D G Y  +  + S E+    VL++ ++G   +    L + P P S  +V +
Sbjct: 489 LQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESGATISKNYDLSDLPGPPSKPQVTD 548

Query: 69  AAKPHLSEVTTEGYPSEP 86
             K   + VT    P  P
Sbjct: 549 VTK---NSVTLSWQPGTP 563


>gi|61888896 roundabout, axon guidance receptor, homolog 2 isoform
           ROBO2b [Homo sapiens]
          Length = 1378

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%)

Query: 9   LKLPGKKSPDLGEYDPLTQADSDESEDDLVLNLQKNGGVKNGKSPLGEAPEPDSDAEVAE 68
           L++   +  D G Y  +  + S E+    VL++ ++G   +    L + P P S  +V +
Sbjct: 473 LQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESGATISKNYDLSDLPGPPSKPQVTD 532

Query: 69  AAKPHLSEVTTEGYPSEP 86
             K   + VT    P  P
Sbjct: 533 VTK---NSVTLSWQPGTP 547


>gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]
          Length = 1630

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 45/145 (31%), Positives = 59/145 (40%), Gaps = 21/145 (14%)

Query: 57   APEPDSDAEVAEAAKPHLSEVTTEGYPSEPLGGLEQKAASSLVSYVRTSVFLLTLGISM- 115
            AP   S +  +    P  S VTT      P G + + A  S  S     + LL  G    
Sbjct: 1451 APLSSSSSSASSITSPS-SNVTTPNSQRSP-GLIYRNAKKSNTSNEEFKLLLLKKGSRSD 1508

Query: 116  ------ILVLLCAFLIPCPPRDL-----HSTWSRHLGSQGGGDLSPLELAD--VNGDGLR 162
                     +L + ++P PP +L      ST   H GSQG   LSPL      VN +G  
Sbjct: 1509 SSYRMSATEILKSPILPKPPGELTAESPQSTDDAHQGSQGAEALSPLSPCSPRVNAEGFS 1568

Query: 163  DVLLSFVMSRNGSAVGVSR--PAAN 185
                SF  S + + VG SR  PAA+
Sbjct: 1569 S--KSFATSAS-ARVGRSRAPPAAS 1590


>gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens]
          Length = 1474

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 45/145 (31%), Positives = 59/145 (40%), Gaps = 21/145 (14%)

Query: 57   APEPDSDAEVAEAAKPHLSEVTTEGYPSEPLGGLEQKAASSLVSYVRTSVFLLTLGISM- 115
            AP   S +  +    P  S VTT      P G + + A  S  S     + LL  G    
Sbjct: 1295 APLSSSSSSASSITSPS-SNVTTPNSQRSP-GLIYRNAKKSNTSNEEFKLLLLKKGSRSD 1352

Query: 116  ------ILVLLCAFLIPCPPRDL-----HSTWSRHLGSQGGGDLSPLELAD--VNGDGLR 162
                     +L + ++P PP +L      ST   H GSQG   LSPL      VN +G  
Sbjct: 1353 SSYRMSATEILKSPILPKPPGELTAESPQSTDDAHQGSQGAEALSPLSPCSPRVNAEGFS 1412

Query: 163  DVLLSFVMSRNGSAVGVSR--PAAN 185
                SF  S + + VG SR  PAA+
Sbjct: 1413 S--KSFATSAS-ARVGRSRAPPAAS 1434


>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
          Length = 517

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 18/113 (15%)

Query: 5   LSRALKLP--GKKSPDLGEYDPLTQADSDESEDD---------LVLNLQKNGG------- 46
           LSR   LP     S   G  +P  + + +E E++         L+LN    GG       
Sbjct: 14  LSRLSPLPPGSPGSAARGRAEPPEEEEEEEEEEEEAEAEAVAALLLNGGSGGGGGGGGGG 73

Query: 47  VKNGKSPLGEAPEPDSDAEVAEAAKPHLSEVTTEGYPSEPLGGLEQKAASSLV 99
           V  G++     P P+S ++  E       +   E   S   GG E+ +A SLV
Sbjct: 74  VGGGEAETMSEPSPESASQAGEDEDEEEDDEEEEDESSSSGGGEEESSAESLV 126


>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
          Length = 503

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 18/113 (15%)

Query: 5   LSRALKLP--GKKSPDLGEYDPLTQADSDESEDD---------LVLNLQKNGG------- 46
           LSR   LP     S   G  +P  + + +E E++         L+LN    GG       
Sbjct: 14  LSRLSPLPPGSPGSAARGRAEPPEEEEEEEEEEEEAEAEAVAALLLNGGSGGGGGGGGGG 73

Query: 47  VKNGKSPLGEAPEPDSDAEVAEAAKPHLSEVTTEGYPSEPLGGLEQKAASSLV 99
           V  G++     P P+S ++  E       +   E   S   GG E+ +A SLV
Sbjct: 74  VGGGEAETMSEPSPESASQAGEDEDEEEDDEEEEDESSSSGGGEEESSAESLV 126


>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
          Length = 282

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 14  KKSPDLGEYDPLTQADS-DESEDDLVLNLQKNGGVKNGKSPLGEAPEPDSDAEVAEAAKP 72
           K   D+ E +  T A +  E++ + V+    N   KNG++ + EAP   S+ E+ E  + 
Sbjct: 46  KTKSDMMEENIDTSAQAVAETKQEAVVEEDYNENAKNGEAKITEAPA--SEKEIVEVKEE 103

Query: 73  HLSEVTTEG 81
           ++ + T +G
Sbjct: 104 NIEDATEKG 112


>gi|66932902 SREBF chaperone protein [Homo sapiens]
          Length = 1279

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 13/67 (19%)

Query: 80  EGYPSEPLGGLEQKAASSLVSYVRTSVFLLTLGISMILVLLCAFLIPCPPRDLHSTWSRH 139
           E  P  P GG++   A   V+  + +   L  GI ++L+LLC + + CP         R+
Sbjct: 691 EAGPKGP-GGVQ---AHGDVTLYKVAALGLATGIVLVLLLLCLYRVLCP---------RN 737

Query: 140 LGSQGGG 146
            G  GGG
Sbjct: 738 YGQLGGG 744


>gi|39995084 integrator complex subunit 3 [Homo sapiens]
          Length = 1042

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 480 TPATSAVTSDQKSVFLFWAEGLSAASPNSDIILGTEPPSL--HHLYLLHPAFPSILLD 535
           T  TS V +    + LF+       SP+ D I+  EP  L  HH    HPA  + LLD
Sbjct: 380 TTCTSNVAASNAKLALFY--DWLFFSPDKDSIMNIEPAILVMHHSMKPHPAITATLLD 435


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.135    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,209,122
Number of Sequences: 37866
Number of extensions: 1172396
Number of successful extensions: 3143
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3125
Number of HSP's gapped (non-prelim): 18
length of query: 622
length of database: 18,247,518
effective HSP length: 108
effective length of query: 514
effective length of database: 14,157,990
effective search space: 7277206860
effective search space used: 7277206860
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.