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Search of human proteins with 13569934
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13569934 sperm acrosome associated 1 [Homo sapiens]
(294 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13569934 sperm acrosome associated 1 [Homo sapiens] 593 e-170
gi|42794618 transmembrane protein 81 [Homo sapiens] 39 0.005
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 32 0.51
gi|55749459 transcription elongation factor A (SII)-like 4 [Homo... 30 2.5
gi|55749442 transcription elongation factor A (SII)-like 4 [Homo... 30 2.5
gi|65505873 transcription elongation factor A (SII)-like 4 [Homo... 30 2.5
gi|55749451 transcription elongation factor A (SII)-like 4 [Homo... 30 2.5
gi|11386181 H2.0-like homeobox [Homo sapiens] 29 4.3
gi|154275767 ADAMTS-like 1 isoform 4 precursor [Homo sapiens] 29 4.3
gi|154275765 ADAMTS-like 1 isoform 2 precursor [Homo sapiens] 29 4.3
gi|18426904 Werner helicase interacting protein isoform 2 [Homo ... 29 5.7
gi|18426902 Werner helicase interacting protein isoform 1 [Homo ... 29 5.7
gi|46195794 poly (ADP-ribose) polymerase family, member 16 [Homo... 29 5.7
gi|239757609 PREDICTED: hypothetical protein [Homo sapiens] 28 7.4
gi|239752116 PREDICTED: hypothetical protein XP_002348117 [Homo ... 28 7.4
gi|239746618 PREDICTED: hypothetical protein XP_002344233 [Homo ... 28 7.4
gi|209977056 transmembrane protein 51 [Homo sapiens] 28 7.4
gi|209977054 transmembrane protein 51 [Homo sapiens] 28 7.4
gi|209977052 transmembrane protein 51 [Homo sapiens] 28 7.4
gi|8922277 transmembrane protein 51 [Homo sapiens] 28 7.4
gi|153792144 ATP-binding cassette, sub-family A, member 10 [Homo... 28 7.4
gi|7706497 UMP-CMP kinase 1 isoform a [Homo sapiens] 28 9.6
gi|13376886 alanyl-tRNA synthetase domain containing 1 isoform 2... 28 9.6
gi|217416402 alanyl-tRNA synthetase domain containing 1 isoform ... 28 9.6
gi|186659512 calmodulin regulated spectrin-associated protein 1 ... 28 9.6
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 28 9.6
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 28 9.6
>gi|13569934 sperm acrosome associated 1 [Homo sapiens]
Length = 294
Score = 593 bits (1528), Expect = e-170
Identities = 294/294 (100%), Positives = 294/294 (100%)
Query: 1 MSPRGTGCSAGLLMTVGWLLLAGLQSARGTNVTAAVQDAGLAHEGEGEEETENNDSETAE 60
MSPRGTGCSAGLLMTVGWLLLAGLQSARGTNVTAAVQDAGLAHEGEGEEETENNDSETAE
Sbjct: 1 MSPRGTGCSAGLLMTVGWLLLAGLQSARGTNVTAAVQDAGLAHEGEGEEETENNDSETAE 60
Query: 61 NYAPPETEDVSNRNVVKEVEFGMCTVTCGIGVREVILTNGCPGGESKCVVRVEECRGPTD 120
NYAPPETEDVSNRNVVKEVEFGMCTVTCGIGVREVILTNGCPGGESKCVVRVEECRGPTD
Sbjct: 61 NYAPPETEDVSNRNVVKEVEFGMCTVTCGIGVREVILTNGCPGGESKCVVRVEECRGPTD 120
Query: 121 CGWGKPISESLESVRLACIHTSPLNRFKYMWKLLRQDQQSIILVNDSAILEVRKESHPLA 180
CGWGKPISESLESVRLACIHTSPLNRFKYMWKLLRQDQQSIILVNDSAILEVRKESHPLA
Sbjct: 121 CGWGKPISESLESVRLACIHTSPLNRFKYMWKLLRQDQQSIILVNDSAILEVRKESHPLA 180
Query: 181 FECDTLDNNEIVATIKFTVYTSSELQMRRSSLPATDAALIFVLTIGVIICVFIIFLLIFI 240
FECDTLDNNEIVATIKFTVYTSSELQMRRSSLPATDAALIFVLTIGVIICVFIIFLLIFI
Sbjct: 181 FECDTLDNNEIVATIKFTVYTSSELQMRRSSLPATDAALIFVLTIGVIICVFIIFLLIFI 240
Query: 241 IINWAAVKAFWGAKASTPEVQSEQSSVRYKDSTSLDQLPTEMPGEDDALSEWNE 294
IINWAAVKAFWGAKASTPEVQSEQSSVRYKDSTSLDQLPTEMPGEDDALSEWNE
Sbjct: 241 IINWAAVKAFWGAKASTPEVQSEQSSVRYKDSTSLDQLPTEMPGEDDALSEWNE 294
>gi|42794618 transmembrane protein 81 [Homo sapiens]
Length = 255
Score = 38.9 bits (89), Expect = 0.005
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 9/104 (8%)
Query: 84 CTVTCGIGVR-EVILTNGCPGGESKCVVRVEECRGPTDCGWGKPISESLESVRLACIHTS 142
CTVTCG+G + E + G G KC R EC CG + L+C+ +
Sbjct: 49 CTVTCGLGYKEETVCEVGPDGVRRKCQTRRLECLTNWICGMLHFTILIGKEFELSCLSSD 108
Query: 143 PL----NRFKYMWKLLRQDQQSIILVNDSAILEVRKESHPLAFE 182
L F++ W+L R +I +D + SH + F+
Sbjct: 109 ILEFGQEAFRFTWRLAR----GVISTDDEVFKPFQANSHFVKFK 148
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 32.3 bits (72), Expect = 0.51
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 35 AVQDAGLAHEGEGEEETENNDSET--AENYAPPETEDVSNRNVVKEVE 80
A + G A E EGE + E+ D E AE A PE+EDV EV+
Sbjct: 1853 APEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQ 1900
Score = 30.8 bits (68), Expect = 1.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 37 QDAGLAHEGEGEEETENNDSETAENYAPPETEDVSNRNVVKEVE 80
++A EG+ + E+E +S+ AE A PE+EDV V E +
Sbjct: 1944 EEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQ 1987
Score = 29.3 bits (64), Expect = 4.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 44 EGEGEEETENNDSETAENYAPPETEDVSNRNVVKEVE 80
EGE + E+E +++ AE A PE+E + + +E +
Sbjct: 2138 EGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQ 2174
Score = 28.9 bits (63), Expect = 5.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 44 EGEGEEETENNDSETAENYAPPETEDV 70
EGE E+E+ D++ AE A PE+E V
Sbjct: 2075 EGEAHPESEDVDAQEAEGEAQPESEGV 2101
Score = 28.9 bits (63), Expect = 5.7
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 13/90 (14%)
Query: 44 EGEGEEETENNDSETAENYAPPETEDVSNRNVVKEVEFGMCTVTCGIGVREVILTNGCPG 103
EGE + E+E ++ AE A PE+E V ++ E + + GI +E
Sbjct: 2122 EGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQ----PESEGIEAQE--------- 2168
Query: 104 GESKCVVRVEECRGPTDCGWGKPISESLES 133
E + +E P G +P SE +E+
Sbjct: 2169 AEEEAQPELEGVEAPEAEGEAQPESEGIEA 2198
>gi|55749459 transcription elongation factor A (SII)-like 4 [Homo
sapiens]
Length = 215
Score = 30.0 bits (66), Expect = 2.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 25 QSARGTNVTAAVQDAGLAHEGEGEEETENNDSETAENYAPPETE 68
Q R VT ++D L +EG+ E + + D E ++ PE+E
Sbjct: 25 QDERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLKDKGKPESE 68
>gi|55749442 transcription elongation factor A (SII)-like 4 [Homo
sapiens]
Length = 215
Score = 30.0 bits (66), Expect = 2.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 25 QSARGTNVTAAVQDAGLAHEGEGEEETENNDSETAENYAPPETE 68
Q R VT ++D L +EG+ E + + D E ++ PE+E
Sbjct: 25 QDERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLKDKGKPESE 68
>gi|65505873 transcription elongation factor A (SII)-like 4 [Homo
sapiens]
Length = 215
Score = 30.0 bits (66), Expect = 2.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 25 QSARGTNVTAAVQDAGLAHEGEGEEETENNDSETAENYAPPETE 68
Q R VT ++D L +EG+ E + + D E ++ PE+E
Sbjct: 25 QDERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLKDKGKPESE 68
>gi|55749451 transcription elongation factor A (SII)-like 4 [Homo
sapiens]
Length = 215
Score = 30.0 bits (66), Expect = 2.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 25 QSARGTNVTAAVQDAGLAHEGEGEEETENNDSETAENYAPPETE 68
Q R VT ++D L +EG+ E + + D E ++ PE+E
Sbjct: 25 QDERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLKDKGKPESE 68
>gi|11386181 H2.0-like homeobox [Homo sapiens]
Length = 488
Score = 29.3 bits (64), Expect = 4.3
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 22 AGLQSARGTNVTAAVQDAGLAHEGEGEEETENNDSETAENYAPPETE 68
AG + + G QD EGE E+E++DSE+ + AP +TE
Sbjct: 347 AGEKPSGGAPAADGEQDERSPSRSEGEAESESSDSESLD-MAPSDTE 392
>gi|154275767 ADAMTS-like 1 isoform 4 precursor [Homo sapiens]
Length = 1762
Score = 29.3 bits (64), Expect = 4.3
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Query: 80 EFGMCTVTCGIGVR-EVIL--------TNGCPGGESKCVVRVEECRGPTDC 121
E+ CTVTCG G+R V+L T GC ++K ++ EEC PT C
Sbjct: 444 EWSPCTVTCGQGLRYRVVLCIDHRGMHTGGC-SPKTKPHIK-EECIVPTPC 492
>gi|154275765 ADAMTS-like 1 isoform 2 precursor [Homo sapiens]
Length = 525
Score = 29.3 bits (64), Expect = 4.3
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Query: 80 EFGMCTVTCGIGVR-EVIL--------TNGCPGGESKCVVRVEECRGPTDC 121
E+ CTVTCG G+R V+L T GC ++K ++ EEC PT C
Sbjct: 444 EWSPCTVTCGQGLRYRVVLCIDHRGMHTGGC-SPKTKPHIK-EECIVPTPC 492
>gi|18426904 Werner helicase interacting protein isoform 2 [Homo
sapiens]
Length = 640
Score = 28.9 bits (63), Expect = 5.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 35 AVQDAGLAHEGEGEEETENNDSETAENYAPPET 67
A A + EGEGEE + ++E+ E+Y P T
Sbjct: 84 ATPTAAESSEGEGEEGDDGGETESRESYDAPPT 116
>gi|18426902 Werner helicase interacting protein isoform 1 [Homo
sapiens]
Length = 665
Score = 28.9 bits (63), Expect = 5.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 35 AVQDAGLAHEGEGEEETENNDSETAENYAPPET 67
A A + EGEGEE + ++E+ E+Y P T
Sbjct: 84 ATPTAAESSEGEGEEGDDGGETESRESYDAPPT 116
>gi|46195794 poly (ADP-ribose) polymerase family, member 16 [Homo
sapiens]
Length = 323
Score = 28.9 bits (63), Expect = 5.7
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 188 NNEIVATIKFTVYTSSELQMRRSSLPATDAALIFVLTIGVIICVFIIFLLIFIIINWAAV 247
NN+++ VY+ + R SS + ++ F V+I ++++ LLI +IN +A
Sbjct: 259 NNQLLRVKYLLVYSQKPPKSRASSQLSWFSSHWFT----VMISLYLLLLLIVSVINSSAF 314
Query: 248 KAFW 251
+ FW
Sbjct: 315 QHFW 318
>gi|239757609 PREDICTED: hypothetical protein [Homo sapiens]
Length = 571
Score = 28.5 bits (62), Expect = 7.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 246 AVKAFWGAKASTPEVQSEQSSVRYKDSTSLDQLP 279
A AFW K +PE Q+ V + S +QLP
Sbjct: 64 AGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLP 97
>gi|239752116 PREDICTED: hypothetical protein XP_002348117 [Homo
sapiens]
Length = 571
Score = 28.5 bits (62), Expect = 7.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 246 AVKAFWGAKASTPEVQSEQSSVRYKDSTSLDQLP 279
A AFW K +PE Q+ V + S +QLP
Sbjct: 64 AGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLP 97
>gi|239746618 PREDICTED: hypothetical protein XP_002344233 [Homo
sapiens]
Length = 571
Score = 28.5 bits (62), Expect = 7.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 246 AVKAFWGAKASTPEVQSEQSSVRYKDSTSLDQLP 279
A AFW K +PE Q+ V + S +QLP
Sbjct: 64 AGNAFWNRKKGSPEESGTQAPVEPSQALSAEQLP 97
>gi|209977056 transmembrane protein 51 [Homo sapiens]
Length = 253
Score = 28.5 bits (62), Expect = 7.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 39 AGLAHEGEGEEETENNDSETAENYAPPETEDVSNRN 74
AG + E +E E D E A Y P E+V N N
Sbjct: 106 AGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTN 141
>gi|209977054 transmembrane protein 51 [Homo sapiens]
Length = 253
Score = 28.5 bits (62), Expect = 7.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 39 AGLAHEGEGEEETENNDSETAENYAPPETEDVSNRN 74
AG + E +E E D E A Y P E+V N N
Sbjct: 106 AGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTN 141
>gi|209977052 transmembrane protein 51 [Homo sapiens]
Length = 253
Score = 28.5 bits (62), Expect = 7.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 39 AGLAHEGEGEEETENNDSETAENYAPPETEDVSNRN 74
AG + E +E E D E A Y P E+V N N
Sbjct: 106 AGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTN 141
>gi|8922277 transmembrane protein 51 [Homo sapiens]
Length = 253
Score = 28.5 bits (62), Expect = 7.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 39 AGLAHEGEGEEETENNDSETAENYAPPETEDVSNRN 74
AG + E +E E D E A Y P E+V N N
Sbjct: 106 AGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTN 141
>gi|153792144 ATP-binding cassette, sub-family A, member 10 [Homo
sapiens]
Length = 1543
Score = 28.5 bits (62), Expect = 7.4
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 219 LIFVLTIGVIIC----VFIIFLLIFIIINWAAVKAFW 251
L+FVL + +I C +F+ ++L FI W FW
Sbjct: 1012 LMFVLVVCIIGCAVSLIFLTYVLSFIFRKWRKNNGFW 1048
>gi|7706497 UMP-CMP kinase 1 isoform a [Homo sapiens]
Length = 228
Score = 28.1 bits (61), Expect = 9.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 8 CSAGLLMTVGWLLLAGLQSARGTNVTAAVQDAGLAHEGEGE---EETENNDSETAE 60
CS L+ + +L G + +GT V+ G H GE +E +N DS+ E
Sbjct: 28 CSPRLMKPLVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGE 83
>gi|13376886 alanyl-tRNA synthetase domain containing 1 isoform 2
[Homo sapiens]
Length = 525
Score = 28.1 bits (61), Expect = 9.6
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 164 VNDSAILEVRKESHPLAFECDTLDNNEIVATIKF-TVYTSSELQMRRSSLPAT 215
V DS + V E H + F C D E+ I+F S + Q +RSS T
Sbjct: 5 VEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSIT 57
>gi|217416402 alanyl-tRNA synthetase domain containing 1 isoform 1
[Homo sapiens]
Length = 586
Score = 28.1 bits (61), Expect = 9.6
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 164 VNDSAILEVRKESHPLAFECDTLDNNEIVATIKF-TVYTSSELQMRRSSLPAT 215
V DS + V E H + F C D E+ I+F S + Q +RSS T
Sbjct: 66 VEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSIT 118
>gi|186659512 calmodulin regulated spectrin-associated protein 1
[Homo sapiens]
Length = 1602
Score = 28.1 bits (61), Expect = 9.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 142 SPLNRFKYMWKLLRQDQQSIILVNDSAILEVRKESHPLAF 181
SP + W LLRQD S ++ + A + E+HP+ F
Sbjct: 722 SPNSHDSEPWTLLRQDSDSDVVDIEEAEHDFMGEAHPVVF 761
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 28.1 bits (61), Expect = 9.6
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 210 SSLPATDAALIFVLTIGVIICVFIIFLLIFIII 242
+ L A+D L V+ + V+ CVF+ F++ + +
Sbjct: 682 ADLEASDLTLYLVVAVAVVSCVFLTFVITLLAL 714
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 28.1 bits (61), Expect = 9.6
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 210 SSLPATDAALIFVLTIGVIICVFIIFLLIFIII 242
+ L A+D L V+ + V+ CVF+ F++ + +
Sbjct: 682 ADLEASDLTLYLVVAVAVVSCVFLTFVITLLAL 714
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,343,559
Number of Sequences: 37866
Number of extensions: 480454
Number of successful extensions: 2113
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2069
Number of HSP's gapped (non-prelim): 48
length of query: 294
length of database: 18,247,518
effective HSP length: 101
effective length of query: 193
effective length of database: 14,423,052
effective search space: 2783649036
effective search space used: 2783649036
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.