Search of human proteins with 13540565

Search of human proteins with 13540565

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13540565 dendritic cell-specific transmembrane protein [Homo
sapiens]
         (470 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13540565 dendritic cell-specific transmembrane protein [Homo ...   947   0.0  
gi|109240536 DC-STAMP domain containing 2 [Homo sapiens]               70   4e-12
gi|219521926 DC-STAMP domain containing 1 isoform 2 [Homo sapiens]     70   4e-12
gi|219521924 DC-STAMP domain containing 1 isoform 1 [Homo sapiens]     70   4e-12
gi|239757512 PREDICTED: chromosome 20 open reading frame 123 [Ho...    49   1e-05
gi|239752028 PREDICTED: hypothetical protein LOC128506 [Homo sap...    49   1e-05
gi|239746512 PREDICTED: hypothetical protein LOC128506 [Homo sap...    49   1e-05
gi|225637556 hypothetical protein LOC128506 [Homo sapiens]             49   1e-05
gi|6912668 solute carrier family 35 member 3A [Homo sapiens]           32   0.95 
gi|222831612 solute carrier family 44, member 2 isoform 1 [Homo ...    30   4.7  
gi|222831610 solute carrier family 44, member 2 isoform 2 [Homo ...    30   4.7  
gi|217330618 Sec61 alpha form 2 isoform b [Homo sapiens]               30   6.2  
gi|217330616 Sec61 alpha form 2 isoform c [Homo sapiens]               30   6.2  
gi|14589847 Sec61 alpha form 2 isoform a [Homo sapiens]                30   6.2  
gi|160948610 E3 ubiquitin-protein ligase UBR3 [Homo sapiens]           30   6.2  

>gi|13540565 dendritic cell-specific transmembrane protein [Homo
           sapiens]
          Length = 470

 Score =  947 bits (2448), Expect = 0.0
 Identities = 470/470 (100%), Positives = 470/470 (100%)

Query: 1   MGIWTSGTDIFLSLWEIYVSPRSPGWMDFIQHLGVCCLVALISVGLLSVAACWFLPSIIA 60
           MGIWTSGTDIFLSLWEIYVSPRSPGWMDFIQHLGVCCLVALISVGLLSVAACWFLPSIIA
Sbjct: 1   MGIWTSGTDIFLSLWEIYVSPRSPGWMDFIQHLGVCCLVALISVGLLSVAACWFLPSIIA 60

Query: 61  AAASWIITCVLLCCSKHARCFILLVFLSCGLREGRNALIAAGTGIVILGHVENIFHNFKG 120
           AAASWIITCVLLCCSKHARCFILLVFLSCGLREGRNALIAAGTGIVILGHVENIFHNFKG
Sbjct: 61  AAASWIITCVLLCCSKHARCFILLVFLSCGLREGRNALIAAGTGIVILGHVENIFHNFKG 120

Query: 121 LLDGMTCNLRAKSFSIHFPLLKKYIEAIQWIYGLATPLSVFDDLVSWNQTLAVSLFSPSH 180
           LLDGMTCNLRAKSFSIHFPLLKKYIEAIQWIYGLATPLSVFDDLVSWNQTLAVSLFSPSH
Sbjct: 121 LLDGMTCNLRAKSFSIHFPLLKKYIEAIQWIYGLATPLSVFDDLVSWNQTLAVSLFSPSH 180

Query: 181 VLEAQLNDSKGEVLSVLYQMATTTEVLSSLGQKLLAFAGLSLVLLGTGLFMKRFLGPCGW 240
           VLEAQLNDSKGEVLSVLYQMATTTEVLSSLGQKLLAFAGLSLVLLGTGLFMKRFLGPCGW
Sbjct: 181 VLEAQLNDSKGEVLSVLYQMATTTEVLSSLGQKLLAFAGLSLVLLGTGLFMKRFLGPCGW 240

Query: 241 KYENIYITRQFVQFDERERHQQRPCVLPLNKEERRKYVIIPTFWPTPKERKNLGLFFLPI 300
           KYENIYITRQFVQFDERERHQQRPCVLPLNKEERRKYVIIPTFWPTPKERKNLGLFFLPI
Sbjct: 241 KYENIYITRQFVQFDERERHQQRPCVLPLNKEERRKYVIIPTFWPTPKERKNLGLFFLPI 300

Query: 301 LIHLCIWVLFAAVDYLLYRLIFSVSKQFQSLPGFEVHLKLHGEKQGTQDIIHDSSFNISV 360
           LIHLCIWVLFAAVDYLLYRLIFSVSKQFQSLPGFEVHLKLHGEKQGTQDIIHDSSFNISV
Sbjct: 301 LIHLCIWVLFAAVDYLLYRLIFSVSKQFQSLPGFEVHLKLHGEKQGTQDIIHDSSFNISV 360

Query: 361 FEPNCIPKPKFLLSETWVPLSVILLILVMLGLLSSILMQLKILVSASFYPSVERKRIQYL 420
           FEPNCIPKPKFLLSETWVPLSVILLILVMLGLLSSILMQLKILVSASFYPSVERKRIQYL
Sbjct: 361 FEPNCIPKPKFLLSETWVPLSVILLILVMLGLLSSILMQLKILVSASFYPSVERKRIQYL 420

Query: 421 HAKLLKKRSKQPLGEVKRRLSLYLTKIHFWLPVLKMIRKKQMDMASADKS 470
           HAKLLKKRSKQPLGEVKRRLSLYLTKIHFWLPVLKMIRKKQMDMASADKS
Sbjct: 421 HAKLLKKRSKQPLGEVKRRLSLYLTKIHFWLPVLKMIRKKQMDMASADKS 470


>gi|109240536 DC-STAMP domain containing 2 [Homo sapiens]
          Length = 773

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 15/233 (6%)

Query: 212 QKLLAFAGLSLVLLGTGLFMKR-FLGPC--GWK-YENIYITRQFVQFDERERHQQRPCVL 267
           ++ LA  G +  LL   L+++  F   C   W  Y+NIYIT +F++ +        P VL
Sbjct: 320 REALALMGFTTPLLLVLLYLQALFYRYCYLNWDHYDNIYITSRFLRMEAVRSTAGLPTVL 379

Query: 268 PLNKEERRKYVIIPTFWPTPKERKNLGLFFLPILIHLCIWVLFAAVDYLLYRLIFSVSKQ 327
           PL+  E R+Y+   + + +  E+    L    ++ HL + +    +DY ++ ++     Q
Sbjct: 380 PLSAHEARRYIPPGSIFLSQWEKFFYILETFNLIRHLLLVLFLVFLDYAVFWVLDLARHQ 439

Query: 328 FQS--LPGFEVHLKLHGEKQGTQDIIHD---SSF------NISVFEPNCIPKPKFLLSET 376
            Q   +    V + L  E  G    I+    S+F      NIS+    C+ +P    S  
Sbjct: 440 LQGEIVARSPVLVSLTVEGTGYAGNIYRDLVSAFDVLQQGNISILSRRCLLRPSEPDSTG 499

Query: 377 WVPLSVILLILVMLGLLSSILMQLKILVSASFYPSVERKRIQYLHAKLLKKRS 429
           ++ + V+  +   + L  S + +L+ ++ AS+YPS E++RI YL+  LL +R+
Sbjct: 500 YIVIGVMYGLCFFITLFGSYVSRLRRVICASYYPSREQERISYLYNVLLSRRT 552



 Score = 33.5 bits (75), Expect = 0.43
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 75  SKHARCFILLVFLSCGLREGRNALIAAGTGIVILGHVENIFHNFKGLLDGMTC 127
           S+  R  +LL+      R+GR  L+ A  G+V+ G   N   NF    + + C
Sbjct: 73  SRQVRATVLLLLPQAFSRQGRTLLLVAAFGLVLQGPCANTLRNFTRASEAVAC 125


>gi|219521926 DC-STAMP domain containing 1 isoform 2 [Homo sapiens]
          Length = 681

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 19/204 (9%)

Query: 241 KYENIYITRQFVQFDERERHQQRPCVLPLNKEERRKYVIIPTFWPT--PKERKNLGLFFL 298
           +++NIYI+  F Q D+R +   +  +LPL K E  K VI P   PT    E  N+    L
Sbjct: 379 RFDNIYISTYFCQIDDRRKKLGKRTLLPLRKAEE-KTVIFPCK-PTIQASEMSNVVRELL 436

Query: 299 PILIHLCIWVLFAAVDYLLYRLIFSVSK----QFQSLPGFEVHLKLHGEK------QGTQ 348
             L  L + V+   +D+ LY +  ++      Q+      ++ +K+ G+       + T 
Sbjct: 437 ETLPILLLLVVLCGLDWALYSIFDTIRHHSFLQYSFRSSHKLEVKVGGDSMLARLLRKTI 496

Query: 349 DIIHDSSFNISVFEPN---CIPKPKFLLSETWVPLSVILLILVMLGLLSSILMQLKILVS 405
             ++ SS   +V E N   C+P+P  L +  +   +V + +LV L LL +   +L+ +++
Sbjct: 497 GALNTSSE--TVMESNNMPCLPQPVGLDARAYWRAAVPIGLLVCLCLLQAFGYRLRRVIA 554

Query: 406 ASFYPSVERKRIQYLHAKLLKKRS 429
           A ++P  E+KRI +L+  LLKKR+
Sbjct: 555 AFYFPKREKKRILFLYNDLLKKRA 578



 Score = 33.9 bits (76), Expect = 0.33
 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 13/120 (10%)

Query: 75  SKHARCFILLVFLSCGLREGRNALIAAGTGIVILGHVENIFHNFKGLLDGMTCNLRAKSF 134
           S H RC  LL+      +EGR  ++      + +G V N+ HN   ++  + C +     
Sbjct: 72  SPHIRCASLLLVPKMLGKEGRLFVLGYALAAIYVGPVANLRHNLNNVIASLGCTVE---- 127

Query: 135 SIHFPLLKKYIEAIQWIYGLATPLSVFDDLVSWNQTLAV---SLFSPSHVLEAQLNDSKG 191
                 L+       W    A   ++F DL+S  + L     ++ +    L+AQ+N   G
Sbjct: 128 ------LQINNTRAAWRISTAPLRAMFKDLLSSKELLRAETRNISATFEDLDAQVNSETG 181


>gi|219521924 DC-STAMP domain containing 1 isoform 1 [Homo sapiens]
          Length = 706

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 19/204 (9%)

Query: 241 KYENIYITRQFVQFDERERHQQRPCVLPLNKEERRKYVIIPTFWPT--PKERKNLGLFFL 298
           +++NIYI+  F Q D+R +   +  +LPL K E  K VI P   PT    E  N+    L
Sbjct: 404 RFDNIYISTYFCQIDDRRKKLGKRTLLPLRKAEE-KTVIFPCK-PTIQASEMSNVVRELL 461

Query: 299 PILIHLCIWVLFAAVDYLLYRLIFSVSK----QFQSLPGFEVHLKLHGEK------QGTQ 348
             L  L + V+   +D+ LY +  ++      Q+      ++ +K+ G+       + T 
Sbjct: 462 ETLPILLLLVVLCGLDWALYSIFDTIRHHSFLQYSFRSSHKLEVKVGGDSMLARLLRKTI 521

Query: 349 DIIHDSSFNISVFEPN---CIPKPKFLLSETWVPLSVILLILVMLGLLSSILMQLKILVS 405
             ++ SS   +V E N   C+P+P  L +  +   +V + +LV L LL +   +L+ +++
Sbjct: 522 GALNTSSE--TVMESNNMPCLPQPVGLDARAYWRAAVPIGLLVCLCLLQAFGYRLRRVIA 579

Query: 406 ASFYPSVERKRIQYLHAKLLKKRS 429
           A ++P  E+KRI +L+  LLKKR+
Sbjct: 580 AFYFPKREKKRILFLYNDLLKKRA 603



 Score = 33.9 bits (76), Expect = 0.33
 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 13/120 (10%)

Query: 75  SKHARCFILLVFLSCGLREGRNALIAAGTGIVILGHVENIFHNFKGLLDGMTCNLRAKSF 134
           S H RC  LL+      +EGR  ++      + +G V N+ HN   ++  + C +     
Sbjct: 97  SPHIRCASLLLVPKMLGKEGRLFVLGYALAAIYVGPVANLRHNLNNVIASLGCTVE---- 152

Query: 135 SIHFPLLKKYIEAIQWIYGLATPLSVFDDLVSWNQTLAV---SLFSPSHVLEAQLNDSKG 191
                 L+       W    A   ++F DL+S  + L     ++ +    L+AQ+N   G
Sbjct: 153 ------LQINNTRAAWRISTAPLRAMFKDLLSSKELLRAETRNISATFEDLDAQVNSETG 206


>gi|239757512 PREDICTED: chromosome 20 open reading frame 123 [Homo
           sapiens]
          Length = 560

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 99/495 (20%), Positives = 175/495 (35%), Gaps = 110/495 (22%)

Query: 1   MGIWTSGTDIFLSLWEIYVSPRSPGWMDFIQHLGVCCLVALISVGLLSVAACWFL----- 55
           +G W +   +  + W+ +  P        +  L +C  +A  + GL+       L     
Sbjct: 15  LGFWKALAPL-QAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLVYHWLASLLLYPPG 73

Query: 56  PSIIAAAASWIITCVLLCCSKHARCFILLVFLSCGLREGRNALIAAGTGIVILGHVENIF 115
           PS + A    ++  + L      RC   L   + G+ +GR  L++  T  + +  V N+ 
Sbjct: 74  PSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYSTATLAIAVVPNVL 133

Query: 116 HNFKGLLDGMTCNLRAKSFSIHFPLLKKYIEAIQWIYGLATPLSVFDDLVSWNQTLAVSL 175
            N       + C             L+  +     ++  +  L       S   T     
Sbjct: 134 ANVGAAGQVLRCVTEGS--------LESLLNTTHQLHAASRALGPTGQAGSRGLT----- 180

Query: 176 FSPSHVLEAQLNDSKGEVLSVLYQMATTTEVLSSLG--QKLLAFAGLSLVLLGTGLFMKR 233
                  EAQ N S       L+ +  T +VL      + L   A L    + TGLFM  
Sbjct: 181 ------FEAQDNGS----AFYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLG 230

Query: 234 FLGPCGW---------KYENIYITRQFVQ--FDERERHQQRP--------CVLPLNKEER 274
            L    W         +++NIY T+Q  Q     +  H   P          L L++EE 
Sbjct: 231 LLVESAWYLHCYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEEL 290

Query: 275 RKYVIIPTFWPTPKERKNLGLFFLPILIHLCIWVLFAAVDYLLYRLIFSVSKQFQSLPGF 334
              ++             LGL  L +L+   + V   A D++ + L  +     Q LP  
Sbjct: 291 LSCLL------------RLGLLAL-LLVATAVAV---ATDHVAFLLAQATVDWAQKLPTV 334

Query: 335 EVHLKLHGEKQGTQDIIHDSSFNISVFEP----NCIPKPKFL-----------LSETWVP 379
            +          T  + +D ++ +  F P       P+  FL           L+    P
Sbjct: 335 PI----------TLTVKYDVAYTVLGFIPFLFNQLAPESPFLSVHSSYQWELRLTSARCP 384

Query: 380 L--------------SVILLILVMLGLLSSILMQLKILVSASFYPSVERKRIQYLHAKLL 425
           L                + L+     LL +   +L+  ++ASF+ + E +R+++LHA+L 
Sbjct: 385 LLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLRHAIAASFFTAQEARRVRHLHARLQ 444

Query: 426 KKRSKQ-----PLGE 435
           ++  +      PLG+
Sbjct: 445 RRHDRHQGQQLPLGD 459


>gi|239752028 PREDICTED: hypothetical protein LOC128506 [Homo
           sapiens]
          Length = 560

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 99/495 (20%), Positives = 175/495 (35%), Gaps = 110/495 (22%)

Query: 1   MGIWTSGTDIFLSLWEIYVSPRSPGWMDFIQHLGVCCLVALISVGLLSVAACWFL----- 55
           +G W +   +  + W+ +  P        +  L +C  +A  + GL+       L     
Sbjct: 15  LGFWKALAPL-QAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLVYHWLASLLLYPPG 73

Query: 56  PSIIAAAASWIITCVLLCCSKHARCFILLVFLSCGLREGRNALIAAGTGIVILGHVENIF 115
           PS + A    ++  + L      RC   L   + G+ +GR  L++  T  + +  V N+ 
Sbjct: 74  PSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYSTATLAIAVVPNVL 133

Query: 116 HNFKGLLDGMTCNLRAKSFSIHFPLLKKYIEAIQWIYGLATPLSVFDDLVSWNQTLAVSL 175
            N       + C             L+  +     ++  +  L       S   T     
Sbjct: 134 ANVGAAGQVLRCVTEGS--------LESLLNTTHQLHAASRALGPTGQAGSRGLT----- 180

Query: 176 FSPSHVLEAQLNDSKGEVLSVLYQMATTTEVLSSLG--QKLLAFAGLSLVLLGTGLFMKR 233
                  EAQ N S       L+ +  T +VL      + L   A L    + TGLFM  
Sbjct: 181 ------FEAQDNGS----AFYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLG 230

Query: 234 FLGPCGW---------KYENIYITRQFVQ--FDERERHQQRP--------CVLPLNKEER 274
            L    W         +++NIY T+Q  Q     +  H   P          L L++EE 
Sbjct: 231 LLVESAWYLHCYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEEL 290

Query: 275 RKYVIIPTFWPTPKERKNLGLFFLPILIHLCIWVLFAAVDYLLYRLIFSVSKQFQSLPGF 334
              ++             LGL  L +L+   + V   A D++ + L  +     Q LP  
Sbjct: 291 LSCLL------------RLGLLAL-LLVATAVAV---ATDHVAFLLAQATVDWAQKLPTV 334

Query: 335 EVHLKLHGEKQGTQDIIHDSSFNISVFEP----NCIPKPKFL-----------LSETWVP 379
            +          T  + +D ++ +  F P       P+  FL           L+    P
Sbjct: 335 PI----------TLTVKYDVAYTVLGFIPFLFNQLAPESPFLSVHSSYQWELRLTSARCP 384

Query: 380 L--------------SVILLILVMLGLLSSILMQLKILVSASFYPSVERKRIQYLHAKLL 425
           L                + L+     LL +   +L+  ++ASF+ + E +R+++LHA+L 
Sbjct: 385 LLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLRHAIAASFFTAQEARRVRHLHARLQ 444

Query: 426 KKRSKQ-----PLGE 435
           ++  +      PLG+
Sbjct: 445 RRHDRHQGQQLPLGD 459


>gi|239746512 PREDICTED: hypothetical protein LOC128506 [Homo
           sapiens]
          Length = 560

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 99/495 (20%), Positives = 175/495 (35%), Gaps = 110/495 (22%)

Query: 1   MGIWTSGTDIFLSLWEIYVSPRSPGWMDFIQHLGVCCLVALISVGLLSVAACWFL----- 55
           +G W +   +  + W+ +  P        +  L +C  +A  + GL+       L     
Sbjct: 15  LGFWKALAPL-QAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLVYHWLASLLLYPPG 73

Query: 56  PSIIAAAASWIITCVLLCCSKHARCFILLVFLSCGLREGRNALIAAGTGIVILGHVENIF 115
           PS + A    ++  + L      RC   L   + G+ +GR  L++  T  + +  V N+ 
Sbjct: 74  PSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYSTATLAIAVVPNVL 133

Query: 116 HNFKGLLDGMTCNLRAKSFSIHFPLLKKYIEAIQWIYGLATPLSVFDDLVSWNQTLAVSL 175
            N       + C             L+  +     ++  +  L       S   T     
Sbjct: 134 ANVGAAGQVLRCVTEGS--------LESLLNTTHQLHAASRALGPTGQAGSRGLT----- 180

Query: 176 FSPSHVLEAQLNDSKGEVLSVLYQMATTTEVLSSLG--QKLLAFAGLSLVLLGTGLFMKR 233
                  EAQ N S       L+ +  T +VL      + L   A L    + TGLFM  
Sbjct: 181 ------FEAQDNGS----AFYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLG 230

Query: 234 FLGPCGW---------KYENIYITRQFVQ--FDERERHQQRP--------CVLPLNKEER 274
            L    W         +++NIY T+Q  Q     +  H   P          L L++EE 
Sbjct: 231 LLVESAWYLHCYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEEL 290

Query: 275 RKYVIIPTFWPTPKERKNLGLFFLPILIHLCIWVLFAAVDYLLYRLIFSVSKQFQSLPGF 334
              ++             LGL  L +L+   + V   A D++ + L  +     Q LP  
Sbjct: 291 LSCLL------------RLGLLAL-LLVATAVAV---ATDHVAFLLAQATVDWAQKLPTV 334

Query: 335 EVHLKLHGEKQGTQDIIHDSSFNISVFEP----NCIPKPKFL-----------LSETWVP 379
            +          T  + +D ++ +  F P       P+  FL           L+    P
Sbjct: 335 PI----------TLTVKYDVAYTVLGFIPFLFNQLAPESPFLSVHSSYQWELRLTSARCP 384

Query: 380 L--------------SVILLILVMLGLLSSILMQLKILVSASFYPSVERKRIQYLHAKLL 425
           L                + L+     LL +   +L+  ++ASF+ + E +R+++LHA+L 
Sbjct: 385 LLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLRHAIAASFFTAQEARRVRHLHARLQ 444

Query: 426 KKRSKQ-----PLGE 435
           ++  +      PLG+
Sbjct: 445 RRHDRHQGQQLPLGD 459


>gi|225637556 hypothetical protein LOC128506 [Homo sapiens]
          Length = 566

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 99/495 (20%), Positives = 175/495 (35%), Gaps = 110/495 (22%)

Query: 1   MGIWTSGTDIFLSLWEIYVSPRSPGWMDFIQHLGVCCLVALISVGLLSVAACWFL----- 55
           +G W +   +  + W+ +  P        +  L +C  +A  + GL+       L     
Sbjct: 21  LGFWKALAPL-QAAWDAFSQPVPASCGQLLTQLLLCASLAAAAAGLVYHWLASLLLYPPG 79

Query: 56  PSIIAAAASWIITCVLLCCSKHARCFILLVFLSCGLREGRNALIAAGTGIVILGHVENIF 115
           PS + A    ++  + L      RC   L   + G+ +GR  L++  T  + +  V N+ 
Sbjct: 80  PSAMVATVCGLLVFLSLGLVPPVRCLFALSVPTLGMEQGRRLLLSYSTATLAIAVVPNVL 139

Query: 116 HNFKGLLDGMTCNLRAKSFSIHFPLLKKYIEAIQWIYGLATPLSVFDDLVSWNQTLAVSL 175
            N       + C             L+  +     ++  +  L       S   T     
Sbjct: 140 ANVGAAGQVLRCVTEGS--------LESLLNTTHQLHAASRALGPTGQAGSRGLT----- 186

Query: 176 FSPSHVLEAQLNDSKGEVLSVLYQMATTTEVLSSLG--QKLLAFAGLSLVLLGTGLFMKR 233
                  EAQ N S       L+ +  T +VL      + L   A L    + TGLFM  
Sbjct: 187 ------FEAQDNGS----AFYLHMLRVTQQVLEDFSGLESLARAAALGTQRVVTGLFMLG 236

Query: 234 FLGPCGW---------KYENIYITRQFVQ--FDERERHQQRP--------CVLPLNKEER 274
            L    W         +++NIY T+Q  Q     +  H   P          L L++EE 
Sbjct: 237 LLVESAWYLHCYLTDLRFDNIYATQQLTQRLAQAQATHLLAPPPTWLLQAAQLRLSQEEL 296

Query: 275 RKYVIIPTFWPTPKERKNLGLFFLPILIHLCIWVLFAAVDYLLYRLIFSVSKQFQSLPGF 334
              ++             LGL  L +L+   + V   A D++ + L  +     Q LP  
Sbjct: 297 LSCLL------------RLGLLAL-LLVATAVAV---ATDHVAFLLAQATVDWAQKLPTV 340

Query: 335 EVHLKLHGEKQGTQDIIHDSSFNISVFEP----NCIPKPKFL-----------LSETWVP 379
            +          T  + +D ++ +  F P       P+  FL           L+    P
Sbjct: 341 PI----------TLTVKYDVAYTVLGFIPFLFNQLAPESPFLSVHSSYQWELRLTSARCP 390

Query: 380 L--------------SVILLILVMLGLLSSILMQLKILVSASFYPSVERKRIQYLHAKLL 425
           L                + L+     LL +   +L+  ++ASF+ + E +R+++LHA+L 
Sbjct: 391 LLPARRPRAAAPLAAGALQLLAGSTVLLEAYARRLRHAIAASFFTAQEARRVRHLHARLQ 450

Query: 426 KKRSKQ-----PLGE 435
           ++  +      PLG+
Sbjct: 451 RRHDRHQGQQLPLGD 465


>gi|6912668 solute carrier family 35 member 3A [Homo sapiens]
          Length = 325

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 21/106 (19%)

Query: 127 CNLRAKSFSIHFPLLKKYIEAIQWIYGLATPLSVFDDLVSWNQTLAVSLFSPSHVLEAQL 186
           C+LRA +  +H  +L K +E ++    LA P  ++        TL       +++L   L
Sbjct: 64  CSLRALNRVLHDEILNKPMETLK----LAIPSGIY--------TLQ------NNLLYVAL 105

Query: 187 NDSKGEVLSVLYQMATTTEVL---SSLGQKLLAFAGLSLVLLGTGL 229
           ++       V YQ+   T  L   S L +KL  +  LSLV+L TG+
Sbjct: 106 SNLDAATYQVTYQLKILTTALFSVSMLSKKLGVYQWLSLVILMTGV 151


>gi|222831612 solute carrier family 44, member 2 isoform 1 [Homo
           sapiens]
          Length = 706

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 18/133 (13%)

Query: 293 LGLFFLPILIHLCIWVLFAAVDYLLYRLIFSVSKQFQSLPGFEVHLKLHGEKQGTQDIIH 352
           L +  L  L  + +WV+   V  +L   IF    ++  L G        G      D+  
Sbjct: 248 LFIILLRFLAGIMVWVMIIMVILVLGYGIFHCYMEYSRLRGEA------GSDVSLVDLGF 301

Query: 353 DSSFNISVFEPNCIPKPKFLLSETWVPLSVILLILVMLGLLSSILMQLKILVSASFYPSV 412
            + F + +            L +TW+   +IL IL ++ +L  I ++ +IL++ +     
Sbjct: 302 QTDFRVYLH-----------LRQTWLAFMIILSILEVIIILLLIFLRKRILIAIALIKEA 350

Query: 413 ERKRIQYLHAKLL 425
            R  + Y+   LL
Sbjct: 351 SR-AVGYVMCSLL 362


>gi|222831610 solute carrier family 44, member 2 isoform 2 [Homo
           sapiens]
          Length = 704

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 18/133 (13%)

Query: 293 LGLFFLPILIHLCIWVLFAAVDYLLYRLIFSVSKQFQSLPGFEVHLKLHGEKQGTQDIIH 352
           L +  L  L  + +WV+   V  +L   IF    ++  L G        G      D+  
Sbjct: 246 LFIILLRFLAGIMVWVMIIMVILVLGYGIFHCYMEYSRLRGEA------GSDVSLVDLGF 299

Query: 353 DSSFNISVFEPNCIPKPKFLLSETWVPLSVILLILVMLGLLSSILMQLKILVSASFYPSV 412
            + F + +            L +TW+   +IL IL ++ +L  I ++ +IL++ +     
Sbjct: 300 QTDFRVYLH-----------LRQTWLAFMIILSILEVIIILLLIFLRKRILIAIALIKEA 348

Query: 413 ERKRIQYLHAKLL 425
            R  + Y+   LL
Sbjct: 349 SR-AVGYVMCSLL 360


>gi|217330618 Sec61 alpha form 2 isoform b [Homo sapiens]
          Length = 454

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 5/67 (7%)

Query: 146 EAIQWIYGLATPLSVFDDLVSWN--QTLAVSLFSPSHVLEAQLNDSKGEVLSVLYQMATT 203
           E +Q  YGL + +S+F   ++ N  +T+    FSP+ +   +  + +G V+++ + +AT 
Sbjct: 145 ELLQKGYGLGSGISLF---IATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATR 201

Query: 204 TEVLSSL 210
           T+ + +L
Sbjct: 202 TDKVRAL 208


>gi|217330616 Sec61 alpha form 2 isoform c [Homo sapiens]
          Length = 437

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 5/67 (7%)

Query: 146 EAIQWIYGLATPLSVFDDLVSWN--QTLAVSLFSPSHVLEAQLNDSKGEVLSVLYQMATT 203
           E +Q  YGL + +S+F   ++ N  +T+    FSP+ +   +  + +G V+++ + +AT 
Sbjct: 167 ELLQKGYGLGSGISLF---IATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATR 223

Query: 204 TEVLSSL 210
           T+ + +L
Sbjct: 224 TDKVRAL 230


>gi|14589847 Sec61 alpha form 2 isoform a [Homo sapiens]
          Length = 476

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 5/67 (7%)

Query: 146 EAIQWIYGLATPLSVFDDLVSWN--QTLAVSLFSPSHVLEAQLNDSKGEVLSVLYQMATT 203
           E +Q  YGL + +S+F   ++ N  +T+    FSP+ +   +  + +G V+++ + +AT 
Sbjct: 167 ELLQKGYGLGSGISLF---IATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATR 223

Query: 204 TEVLSSL 210
           T+ + +L
Sbjct: 224 TDKVRAL 230


>gi|160948610 E3 ubiquitin-protein ligase UBR3 [Homo sapiens]
          Length = 1888

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 72   LCCSKHARCFILLVFLSCGLREGRNALIAAGTGIVILGH 110
            LCC + + C  +L   +CG   G   LI A   I+I GH
Sbjct: 1791 LCCKQQSYCECVLHSQNCGAGTGIFLLINASVIIIIRGH 1829


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.141    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,434,086
Number of Sequences: 37866
Number of extensions: 767409
Number of successful extensions: 2079
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2055
Number of HSP's gapped (non-prelim): 23
length of query: 470
length of database: 18,247,518
effective HSP length: 106
effective length of query: 364
effective length of database: 14,233,722
effective search space: 5181074808
effective search space used: 5181074808
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.