BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|59859882 baculoviral IAP repeat-containing protein 5 isoform 3 [Homo sapiens] (165 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|59859882 baculoviral IAP repeat-containing protein 5 isoform ... 352 1e-97 gi|59859878 baculoviral IAP repeat-containing protein 5 isoform ... 291 2e-79 gi|59859880 baculoviral IAP repeat-containing protein 5 isoform ... 171 2e-43 gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens] 53 1e-07 gi|119393878 NLR family, apoptosis inhibitory protein isoform 1 ... 49 2e-06 gi|224451040 Yip1 interacting factor homolog B isoform 7 [Homo s... 46 2e-05 gi|11545910 livin inhibitor of apoptosis isoform beta [Homo sapi... 45 2e-05 gi|21536421 livin inhibitor of apoptosis isoform alpha [Homo sap... 45 2e-05 gi|148664226 plakophilin 2 isoform 2b [Homo sapiens] 42 2e-04 gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens] 42 3e-04 gi|116256455 zinc finger protein 429 [Homo sapiens] 41 4e-04 gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sa... 40 7e-04 gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sap... 40 7e-04 gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo sa... 40 0.001 gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sap... 39 0.002 gi|44680139 baculoviral IAP repeat-containing 8 [Homo sapiens] 39 0.002 gi|119393876 NLR family, apoptosis inhibitory protein isoform 2 ... 38 0.003 gi|148277022 selenoprotein P isoform 2 [Homo sapiens] 35 0.030 gi|239756590 PREDICTED: hypothetical protein XP_002344942 [Homo ... 33 0.086 gi|169204982 PREDICTED: hypothetical protein [Homo sapiens] 33 0.086 gi|239751084 PREDICTED: hypothetical protein XP_002347710 [Homo ... 33 0.086 gi|169205503 PREDICTED: hypothetical protein [Homo sapiens] 33 0.086 gi|239745573 PREDICTED: hypothetical protein XP_002344133 [Homo ... 33 0.086 gi|169204452 PREDICTED: hypothetical protein [Homo sapiens] 33 0.086 gi|215982794 myosin VA isoform 2 [Homo sapiens] 33 0.15 gi|215982791 myosin VA isoform 1 [Homo sapiens] 33 0.15 gi|4759046 RNA polymerase I subunit isoform 2 [Homo sapiens] 30 0.73 gi|143770880 laminin, beta 4 [Homo sapiens] 30 1.2 gi|11038659 ADAM metallopeptidase with thrombospondin type 1 mot... 30 1.2 gi|56550067 cAMP responsive element binding protein 3-like 2 [Ho... 29 2.1 >gi|59859882 baculoviral IAP repeat-containing protein 5 isoform 3 [Homo sapiens] Length = 165 Score = 352 bits (902), Expect = 1e-97 Identities = 165/165 (100%), Positives = 165/165 (100%) Query: 1 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 60 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC Sbjct: 1 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 60 Query: 61 FKELEGWEPDDDPIGPGTVAYACNTSTLGGRGGRITREEHKKHSSGCAFLSVKKQFEELT 120 FKELEGWEPDDDPIGPGTVAYACNTSTLGGRGGRITREEHKKHSSGCAFLSVKKQFEELT Sbjct: 61 FKELEGWEPDDDPIGPGTVAYACNTSTLGGRGGRITREEHKKHSSGCAFLSVKKQFEELT 120 Query: 121 LGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVRRAIEQLAAMD 165 LGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVRRAIEQLAAMD Sbjct: 121 LGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVRRAIEQLAAMD 165 >gi|59859878 baculoviral IAP repeat-containing protein 5 isoform 1 [Homo sapiens] Length = 142 Score = 291 bits (744), Expect = 2e-79 Identities = 142/165 (86%), Positives = 142/165 (86%), Gaps = 23/165 (13%) Query: 1 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 60 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC Sbjct: 1 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 60 Query: 61 FKELEGWEPDDDPIGPGTVAYACNTSTLGGRGGRITREEHKKHSSGCAFLSVKKQFEELT 120 FKELEGWEPDDDPI EEHKKHSSGCAFLSVKKQFEELT Sbjct: 61 FKELEGWEPDDDPI-----------------------EEHKKHSSGCAFLSVKKQFEELT 97 Query: 121 LGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVRRAIEQLAAMD 165 LGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVRRAIEQLAAMD Sbjct: 98 LGEFLKLDRERAKNKIAKETNNKKKEFEETAEKVRRAIEQLAAMD 142 >gi|59859880 baculoviral IAP repeat-containing protein 5 isoform 2 [Homo sapiens] Length = 137 Score = 171 bits (434), Expect = 2e-43 Identities = 73/74 (98%), Positives = 74/74 (100%) Query: 1 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 60 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC Sbjct: 1 MGAPTLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFC 60 Query: 61 FKELEGWEPDDDPI 74 FKELEGWEPDDDP+ Sbjct: 61 FKELEGWEPDDDPM 74 >gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens] Length = 4857 Score = 53.1 bits (126), Expect = 1e-07 Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 23/94 (24%) Query: 17 HRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIGP 76 +R TF +WP + P+ MA+AGF H P + D A CF C L WEP D+P Sbjct: 288 NRRETFTSWPHVGYRWAQPDPMAQAGFYHQPASSGDDRAMCFTCSVCLVCWEPTDEP--- 344 Query: 77 GTVAYACNTSTLGGRGGRITREEHKKHSSGCAFL 110 EH++HS C F+ Sbjct: 345 --------------------WSEHERHSPNCPFV 358 >gi|119393878 NLR family, apoptosis inhibitory protein isoform 1 [Homo sapiens] Length = 1403 Score = 48.9 bits (115), Expect = 2e-06 Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 29/107 (27%) Query: 15 KDHRISTFKNWPF-LEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDP 73 ++ R+++F+NWPF ++G + P ++EAGF+ + D QCF C L WE DDP Sbjct: 159 EEARLASFRNWPFYVQGIS--PCVLSEAGFVFT---GKQDTVQCFSCGGCLGNWEEGDDP 213 Query: 74 IGPGTVAYACNTSTLGGRGGRITREEHKKHSSGCAFLSVKKQFEELT 120 +EH K C FL KK EE+T Sbjct: 214 -----------------------WKEHAKWFPKCEFLRSKKSSEEIT 237 Score = 38.1 bits (87), Expect = 0.003 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 5/61 (8%) Query: 18 RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIGPG 77 R+ +FK+WP A +A+AG + + D+ QCF C LE W+ DDP+ Sbjct: 281 RLDSFKDWP--RESAVGVAALAKAGLFYTGIK---DIVQCFSCGGCLEKWQEGDDPLDDH 335 Query: 78 T 78 T Sbjct: 336 T 336 Score = 27.3 bits (59), Expect = 6.2 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 15/110 (13%) Query: 50 NEPDLAQCFFCFKELEGWEPDD--------DPIGPGTVAYACNTSTLGGRGGRITREEHK 101 +E + F ++ W P + + G + C+ G R+ E+HK Sbjct: 59 SEAKRLKTFVTYEPYSSWIPQEMAAAGFYFTGVKSGIQCFCCSLILFGAGLTRLPIEDHK 118 Query: 102 KHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNKKKEFEETA 151 + C FL K +G K D R KN ++ K + EE A Sbjct: 119 RFHPDCGFLLNK------DVGNIAKYD-IRVKNLKSRLRGGKMRYQEEEA 161 >gi|224451040 Yip1 interacting factor homolog B isoform 7 [Homo sapiens] Length = 291 Score = 45.8 bits (107), Expect = 2e-05 Identities = 20/25 (80%), Positives = 22/25 (88%) Query: 73 PIGPGTVAYACNTSTLGGRGGRITR 97 P+ PG VA+ACN STLGGRGGRITR Sbjct: 262 PLLPGAVAHACNPSTLGGRGGRITR 286 >gi|11545910 livin inhibitor of apoptosis isoform beta [Homo sapiens] Length = 280 Score = 45.4 bits (106), Expect = 2e-05 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 5/56 (8%) Query: 18 RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDP 73 R+++F +WP PE +A AGF H D +CFFC+ L+ W+ DDP Sbjct: 90 RLASFYDWPLT--AEVPPELLAAAGFFHT---GHQDKVRCFFCYGGLQSWKRGDDP 140 >gi|21536421 livin inhibitor of apoptosis isoform alpha [Homo sapiens] Length = 298 Score = 45.4 bits (106), Expect = 2e-05 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 5/56 (8%) Query: 18 RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDP 73 R+++F +WP PE +A AGF H D +CFFC+ L+ W+ DDP Sbjct: 90 RLASFYDWPLT--AEVPPELLAAAGFFHT---GHQDKVRCFFCYGGLQSWKRGDDP 140 >gi|148664226 plakophilin 2 isoform 2b [Homo sapiens] Length = 881 Score = 42.4 bits (98), Expect = 2e-04 Identities = 18/22 (81%), Positives = 20/22 (90%) Query: 76 PGTVAYACNTSTLGGRGGRITR 97 PG VA+ACN STLGG+GGRITR Sbjct: 472 PGAVAHACNPSTLGGQGGRITR 493 >gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens] Length = 374 Score = 41.6 bits (96), Expect = 3e-04 Identities = 19/29 (65%), Positives = 21/29 (72%) Query: 75 GPGTVAYACNTSTLGGRGGRITREEHKKH 103 G G VA+ACN STLGGRGG ITR + H Sbjct: 344 GLGAVAHACNPSTLGGRGGWITRSGDRDH 372 >gi|116256455 zinc finger protein 429 [Homo sapiens] Length = 674 Score = 41.2 bits (95), Expect = 4e-04 Identities = 18/21 (85%), Positives = 19/21 (90%) Query: 77 GTVAYACNTSTLGGRGGRITR 97 G VA+ACN STLGGRGGRITR Sbjct: 646 GVVAHACNPSTLGGRGGRITR 666 >gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sapiens] Length = 604 Score = 40.4 bits (93), Expect = 7e-04 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 18 RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDP 73 R TF NWP PE++A AGF + ++ +CF C L WE DDP Sbjct: 258 RFKTFFNWP--SSVLVNPEQLASAGFYYVGNSDD---VKCFCCDGGLRCWESGDDP 308 Score = 36.2 bits (82), Expect = 0.013 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Query: 18 RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDD 72 R+ TF+ WP +P +A+AGF + D CF C +L WEP D+ Sbjct: 172 RLLTFQTWPLT---FLSPTDLAKAGFYYI---GPGDRVACFACGGKLSNWEPKDN 220 Score = 31.6 bits (70), Expect = 0.33 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Query: 17 HRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDP 73 +R+ST+ +P G + +A AGF + D +CF C L+ W+ D P Sbjct: 31 YRMSTYSTFP--AGVPVSERSLARAGFYYTGVN---DKVKCFCCGLMLDNWKRGDSP 82 >gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sapiens] Length = 604 Score = 40.4 bits (93), Expect = 7e-04 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 18 RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDP 73 R TF NWP PE++A AGF + ++ +CF C L WE DDP Sbjct: 258 RFKTFFNWP--SSVLVNPEQLASAGFYYVGNSDD---VKCFCCDGGLRCWESGDDP 308 Score = 36.2 bits (82), Expect = 0.013 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Query: 18 RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDD 72 R+ TF+ WP +P +A+AGF + D CF C +L WEP D+ Sbjct: 172 RLLTFQTWPLT---FLSPTDLAKAGFYYI---GPGDRVACFACGGKLSNWEPKDN 220 Score = 31.6 bits (70), Expect = 0.33 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Query: 17 HRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDP 73 +R+ST+ +P G + +A AGF + D +CF C L+ W+ D P Sbjct: 31 YRMSTYSTFP--AGVPVSERSLARAGFYYTGVN---DKVKCFCCGLMLDNWKRGDSP 82 >gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo sapiens] Length = 497 Score = 39.7 bits (91), Expect = 0.001 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%) Query: 13 FLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDD 71 + ++ R+ +F+NWP + TP +A AG + D QCF C +L+ WEP D Sbjct: 161 YSEEARLKSFQNWP--DYAHLTPRELASAGLYYTGIG---DQVQCFCCGGKLKNWEPCD 214 Score = 37.0 bits (84), Expect = 0.008 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%) Query: 17 HRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIG 75 +R+ TF N+P G + +A AGF++ E D +CF C ++ W+ D +G Sbjct: 28 NRLKTFANFP--SGSPVSASTLARAGFLYT---GEGDTVRCFSCHAAVDRWQYGDSAVG 81 Score = 36.6 bits (83), Expect = 0.010 Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 9/95 (9%) Query: 12 PFLKDH--RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEP 69 P + D+ RI TF W + + E++A AGF E D +CF C L W+P Sbjct: 260 PSMADYEARIFTFGTWIY----SVNKEQLARAGFYAL---GEGDKVKCFHCGGGLTDWKP 312 Query: 70 DDDPIGPGTVAYACNTSTLGGRGGRITREEHKKHS 104 +DP Y L +G H HS Sbjct: 313 SEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHS 347 >gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sapiens] Length = 618 Score = 39.3 bits (90), Expect = 0.002 Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 29/106 (27%) Query: 5 TLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKEL 64 T P ++ ++ R T+ WP +P +A AGF + D CF C +L Sbjct: 174 TNPYSYAMSTEEARFLTYHMWPLT---FLSPSELARAGFYYI---GPGDRVACFACGGKL 227 Query: 65 EGWEPDDDPIGPGTVAYACNTSTLGGRGGRITREEHKKHSSGCAFL 110 WEP DD + EH++H C FL Sbjct: 228 SNWEPKDDAM-----------------------SEHRRHFPNCPFL 250 Score = 37.4 bits (85), Expect = 0.006 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 18 RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDP 73 R+ TF WP PE++A AGF + ++ +CF C L WE DDP Sbjct: 272 RMRTFMYWP--SSVPVQPEQLASAGFYYVGRNDD---VKCFCCDGGLRCWESGDDP 322 Score = 32.7 bits (73), Expect = 0.15 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 5/58 (8%) Query: 17 HRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPI 74 +R+ST+ +P G + +A AGF + D +CF C L+ W+ D PI Sbjct: 48 YRMSTYSTFP--AGVPVSERSLARAGFYYTGVN---DKVKCFCCGLMLDNWKLGDSPI 100 >gi|44680139 baculoviral IAP repeat-containing 8 [Homo sapiens] Length = 236 Score = 38.9 bits (89), Expect = 0.002 Identities = 35/133 (26%), Positives = 50/133 (37%), Gaps = 31/133 (23%) Query: 18 RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIGPG 77 R+ TF W + + E++A AGF E D QCF C L W+P +DP Sbjct: 7 RLITFGTWMY----SVNKEQLARAGFYAIGQE---DKVQCFHCGGGLANWKPKEDP---- 55 Query: 78 TVAYACNTSTLGGRGGRITREEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIA 137 E+H K GC +L +K E + L E A + Sbjct: 56 -------------------WEQHAKWYPGCKYLLEEKGHEYIN-NIHLTRSLEGALVQTT 95 Query: 138 KETNNKKKEFEET 150 K+T + K +T Sbjct: 96 KKTPSLTKRISDT 108 >gi|119393876 NLR family, apoptosis inhibitory protein isoform 2 [Homo sapiens] Length = 1241 Score = 38.1 bits (87), Expect = 0.003 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 5/61 (8%) Query: 18 RISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIGPG 77 R+ +FK+WP A +A+AG + + D+ QCF C LE W+ DDP+ Sbjct: 119 RLDSFKDWP--RESAVGVAALAKAGLFYTGIK---DIVQCFSCGGCLEKWQEGDDPLDDH 173 Query: 78 T 78 T Sbjct: 174 T 174 >gi|148277022 selenoprotein P isoform 2 [Homo sapiens] Length = 411 Score = 35.0 bits (79), Expect = 0.030 Identities = 16/23 (69%), Positives = 18/23 (78%) Query: 75 GPGTVAYACNTSTLGGRGGRITR 97 G VA+ACN STLGG+G RITR Sbjct: 4 GLDAVAHACNPSTLGGQGRRITR 26 >gi|239756590 PREDICTED: hypothetical protein XP_002344942 [Homo sapiens] Length = 120 Score = 33.5 bits (75), Expect = 0.086 Identities = 17/28 (60%), Positives = 19/28 (67%) Query: 77 GTVAYACNTSTLGGRGGRITREEHKKHS 104 G VA+ N STLGGRGG ITR + K S Sbjct: 83 GPVAHTYNPSTLGGRGGWITRGQEFKTS 110 >gi|169204982 PREDICTED: hypothetical protein [Homo sapiens] Length = 117 Score = 33.5 bits (75), Expect = 0.086 Identities = 15/29 (51%), Positives = 18/29 (62%) Query: 76 PGTVAYACNTSTLGGRGGRITREEHKKHS 104 P V + CN STLGGRGG+I + K S Sbjct: 79 PSVVPHTCNPSTLGGRGGQIPSGQECKTS 107 >gi|239751084 PREDICTED: hypothetical protein XP_002347710 [Homo sapiens] Length = 120 Score = 33.5 bits (75), Expect = 0.086 Identities = 17/28 (60%), Positives = 19/28 (67%) Query: 77 GTVAYACNTSTLGGRGGRITREEHKKHS 104 G VA+ N STLGGRGG ITR + K S Sbjct: 83 GPVAHTYNPSTLGGRGGWITRGQEFKTS 110 >gi|169205503 PREDICTED: hypothetical protein [Homo sapiens] Length = 117 Score = 33.5 bits (75), Expect = 0.086 Identities = 15/29 (51%), Positives = 18/29 (62%) Query: 76 PGTVAYACNTSTLGGRGGRITREEHKKHS 104 P V + CN STLGGRGG+I + K S Sbjct: 79 PSVVPHTCNPSTLGGRGGQIPSGQECKTS 107 >gi|239745573 PREDICTED: hypothetical protein XP_002344133 [Homo sapiens] Length = 120 Score = 33.5 bits (75), Expect = 0.086 Identities = 17/28 (60%), Positives = 19/28 (67%) Query: 77 GTVAYACNTSTLGGRGGRITREEHKKHS 104 G VA+ N STLGGRGG ITR + K S Sbjct: 83 GPVAHTYNPSTLGGRGGWITRGQEFKTS 110 >gi|169204452 PREDICTED: hypothetical protein [Homo sapiens] Length = 117 Score = 33.5 bits (75), Expect = 0.086 Identities = 15/29 (51%), Positives = 18/29 (62%) Query: 76 PGTVAYACNTSTLGGRGGRITREEHKKHS 104 P V + CN STLGGRGG+I + K S Sbjct: 79 PSVVPHTCNPSTLGGRGGQIPSGQECKTS 107 >gi|215982794 myosin VA isoform 2 [Homo sapiens] Length = 1828 Score = 32.7 bits (73), Expect = 0.15 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Query: 81 YACNTSTLGGRGGRITREEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAK-NKIAKE 139 Y C L G I E +K S L + ++ ++ G L L E AK K ++ Sbjct: 943 YKCLVEKLTNLEG-IYNSETEKLRSDLERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQ 1001 Query: 140 TNNKKKEFEETAEKVRRAIEQLAA 163 T ++KK EE A++ ++ EQL + Sbjct: 1002 TRSEKKCIEEHADRYKQETEQLVS 1025 >gi|215982791 myosin VA isoform 1 [Homo sapiens] Length = 1855 Score = 32.7 bits (73), Expect = 0.15 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Query: 81 YACNTSTLGGRGGRITREEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAK-NKIAKE 139 Y C L G I E +K S L + ++ ++ G L L E AK K ++ Sbjct: 943 YKCLVEKLTNLEG-IYNSETEKLRSDLERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQ 1001 Query: 140 TNNKKKEFEETAEKVRRAIEQLAA 163 T ++KK EE A++ ++ EQL + Sbjct: 1002 TRSEKKCIEEHADRYKQETEQLVS 1025 >gi|4759046 RNA polymerase I subunit isoform 2 [Homo sapiens] Length = 342 Score = 30.4 bits (67), Expect = 0.73 Identities = 13/25 (52%), Positives = 16/25 (64%) Query: 79 VAYACNTSTLGGRGGRITREEHKKH 103 VA+ CN STLGG+G IT + H Sbjct: 316 VAHTCNPSTLGGQGEWITGSRERDH 340 >gi|143770880 laminin, beta 4 [Homo sapiens] Length = 1761 Score = 29.6 bits (65), Expect = 1.2 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 5/56 (8%) Query: 99 EHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNKKKEFEETAEKV 154 E +H +G S++K+F EL ++ L R+ + + KET K K+ ++ AEK+ Sbjct: 1653 ESAQHQAG----SLEKEFVELKK-QYAILQRKTSTTGLTKETLGKVKQLKDAAEKL 1703 >gi|11038659 ADAM metallopeptidase with thrombospondin type 1 motif, 2 isoform 2 [Homo sapiens] Length = 566 Score = 29.6 bits (65), Expect = 1.2 Identities = 12/17 (70%), Positives = 14/17 (82%) Query: 76 PGTVAYACNTSTLGGRG 92 PG VA+AC STLGG+G Sbjct: 546 PGAVAHACYPSTLGGQG 562 >gi|56550067 cAMP responsive element binding protein 3-like 2 [Homo sapiens] Length = 520 Score = 28.9 bits (63), Expect = 2.1 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 88 LGGRGGRITREEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKI-AKETNNKKKE 146 L G G + EE K+ + K + + LK R + KNKI A+E+ KKKE Sbjct: 258 LQGSGPLVLTEEEKRTLIAEGYPIPTKLPLSKSEEKALKKIRRKIKNKISAQESRRKKKE 317 Query: 147 FEETAEK 153 + ++ EK Sbjct: 318 YMDSLEK 324 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.135 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,977,400 Number of Sequences: 37866 Number of extensions: 323833 Number of successful extensions: 1321 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 23 Number of HSP's that attempted gapping in prelim test: 1266 Number of HSP's gapped (non-prelim): 71 length of query: 165 length of database: 18,247,518 effective HSP length: 94 effective length of query: 71 effective length of database: 14,688,114 effective search space: 1042856094 effective search space used: 1042856094 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.