Guide to the Human Genome
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Name: SLC25A30 Sequence: fasta or formatted (291aa) NCBI GI: 58197562
Description:

solute carrier family 25, member 30

Referenced in:

Mitochondria
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         18           2
 C cysteine            1.7          5           1
 D aspartate           3.4         10           1
 E glutamate           3.8         11           2
 F phenylalanine       4.1         12           2
 G glycine            10.0         29           2
 H histidine           1.0          3           1
 I isoleucine          7.9         23           2
 K lysine              5.2         15           2
 L leucine            11.3         33           2
 M methionine          3.1          9           2
 N asparagine          4.1         12           1
 P proline             3.4         10           1
 Q glutamine           4.8         14           2
 R arginine            5.8         17           1
 S serine              5.2         15           2
 T threonine           7.6         22           1
 V valine              5.5         16           2
 W tryptophan          2.1          6           1
 Y tyrosine            3.8         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 25, member 30 
SLC25A14              0.802   solute carrier family 25, member 14 isoform UCP5L [Ho...
SLC25A14              0.802   solute carrier family 25, member 14 isoform UCP5S [H...
SLC25A27              0.338   solute carrier family 25, member 27 
UCP2                  0.312   uncoupling protein 2 
UCP3                  0.303   uncoupling protein 3 isoform UCP3L 
UCP1                  0.260   uncoupling protein 1 
SLC25A11              0.246   solute carrier family 25 (mitochondrial carrier; oxo...
UCP3                  0.237   uncoupling protein 3 isoform UCP3S 
SLC25A10              0.214   solute carrier family 25 (mitochondrial carrier; dic...
SLC25A34              0.173   solute carrier family 25, member 34 
SLC25A23              0.149   solute carrier family 25, member 23 
SLC25A6               0.142   solute carrier family 25, member A6 
SLC25A5               0.142   solute carrier family 25, member 5 
SLC25A12              0.140   solute carrier family 25, member 12 
SLC25A41              0.138   solute carrier family 25, member 41 
SLC25A4               0.135   solute carrier family 25 (mitochondrial carrier; ade...
LOC100292202          0.133   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.133   PREDICTED: similar to solute carrier family 25, mem...
SLC25A25              0.133   solute carrier family 25, member 25 isoform c 
SLC25A25              0.133   solute carrier family 25, member 25 isoform a 
SLC25A25              0.133   solute carrier family 25, member 25 isoform d 
SLC25A25              0.133   solute carrier family 25, member 25 isoform b 
SLC25A21              0.131   solute carrier family 25 (mitochondrial oxodicarboxy...
SLC25A24              0.129   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.129   solute carrier family 25 member 24 isoform 2 
SLC25A31              0.122   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A13              0.122   solute carrier family 25, member 13 isoform 2 
SLC25A13              0.122   solute carrier family 25, member 13 isoform 1 [Homo...
SLC25A35              0.122   solute carrier family 25, member 35 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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