Guide to the Human Genome
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Name: SLC25A27 Sequence: fasta or formatted (323aa) NCBI GI: 108860679
Description:

solute carrier family 25, member 27

Referenced in:

Mitochondria
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         23           2
 C cysteine            0.9          3           1
 D aspartate           3.1         10           1
 E glutamate           6.5         21           4
 F phenylalanine       3.4         11           1
 G glycine             9.9         32           2
 H histidine           2.2          7           2
 I isoleucine          4.3         14           2
 K lysine              5.0         16           1
 L leucine            11.8         38           2
 M methionine          4.6         15           2
 N asparagine          1.9          6           1
 P proline             5.0         16           1
 Q glutamine           3.7         12           1
 R arginine            6.5         21           1
 S serine              5.9         19           2
 T threonine           5.6         18           2
 V valine              7.1         23           2
 W tryptophan          2.5          8           1
 Y tyrosine            3.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 25, member 27 
SLC25A30              0.303   solute carrier family 25, member 30 
SLC25A14              0.300   solute carrier family 25, member 14 isoform UCP5L [Ho...
SLC25A14              0.300   solute carrier family 25, member 14 isoform UCP5S [H...
UCP2                  0.248   uncoupling protein 2 
UCP3                  0.248   uncoupling protein 3 isoform UCP3L 
UCP1                  0.232   uncoupling protein 1 
UCP3                  0.206   uncoupling protein 3 isoform UCP3S 
SLC25A11              0.197   solute carrier family 25 (mitochondrial carrier; oxo...
SLC25A10              0.178   solute carrier family 25 (mitochondrial carrier; dic...
SLC25A34              0.163   solute carrier family 25, member 34 
SLC25A35              0.119   solute carrier family 25, member 35 
SLC25A31              0.111   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A21              0.110   solute carrier family 25 (mitochondrial oxodicarboxy...
SLC25A6               0.106   solute carrier family 25, member A6 
SLC25A4               0.103   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A43              0.097   mitochondrial solute carrier protein 
SLC25A19              0.095   solute carrier family 25, member 19 
SLC25A19              0.095   solute carrier family 25, member 19 
SLC25A19              0.095   solute carrier family 25, member 19 
SLC25A5               0.094   solute carrier family 25, member 5 
SLC25A23              0.090   solute carrier family 25, member 23 
SLC25A24              0.087   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.087   solute carrier family 25 member 24 isoform 2 
SLC25A42              0.086   solute carrier family 25, member 42 
SLC25A12              0.083   solute carrier family 25, member 12 
LOC100292202          0.083   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.083   PREDICTED: similar to solute carrier family 25, mem...
SLC25A40              0.083   mitochondrial carrier family protein 
SLC25A25              0.083   solute carrier family 25, member 25 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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