Guide to the Human Genome
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Name: SLC25A4 Sequence: fasta or formatted (298aa) NCBI GI: 55749577
Description:

solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4

Referenced in:

Mitochondria
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         34           3
 C cysteine            1.3          4           1
 D aspartate           5.4         16           1
 E glutamate           2.0          6           1
 F phenylalanine       7.0         21           2
 G glycine            10.4         31           2
 H histidine           1.7          5           1
 I isoleucine          5.7         17           3
 K lysine              7.7         23           2
 L leucine             7.4         22           3
 M methionine          2.7          8           3
 N asparagine          2.3          7           1
 P proline             2.3          7           1
 Q glutamine           4.4         13           1
 R arginine            5.7         17           3
 S serine              4.7         14           1
 T threonine           3.0          9           1
 V valine              8.4         25           2
 W tryptophan          2.0          6           1
 Y tyrosine            4.4         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 25 (mitochondrial carrier; ade... 
SLC25A5               0.902   solute carrier family 25, member 5 
SLC25A6               0.900   solute carrier family 25, member A6 
SLC25A31              0.710   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A24              0.183   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.183   solute carrier family 25 member 24 isoform 2 
SLC25A42              0.164   solute carrier family 25, member 42 
SLC25A23              0.155   solute carrier family 25, member 23 
SLC25A12              0.153   solute carrier family 25, member 12 
LOC100292202          0.152   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.152   PREDICTED: similar to solute carrier family 25, mem...
SLC25A25              0.152   solute carrier family 25, member 25 isoform c 
SLC25A25              0.152   solute carrier family 25, member 25 isoform a 
SLC25A25              0.152   solute carrier family 25, member 25 isoform d 
SLC25A25              0.152   solute carrier family 25, member 25 isoform b 
SLC25A16              0.148   solute carrier family 25, member 16 
SLC25A13              0.147   solute carrier family 25, member 13 isoform 2 
SLC25A13              0.147   solute carrier family 25, member 13 isoform 1 [Homo...
SLC25A41              0.141   solute carrier family 25, member 41 
SLC25A43              0.136   mitochondrial solute carrier protein 
SLC25A30              0.131   solute carrier family 25, member 30 
SLC25A14              0.128   solute carrier family 25, member 14 isoform UCP5L [Ho...
SLC25A14              0.128   solute carrier family 25, member 14 isoform UCP5S [H...
SLC25A32              0.128   solute carrier family 25, member 32 
SLC25A18              0.124   solute carrier 
UCP3                  0.114   uncoupling protein 3 isoform UCP3L 
SLC25A27              0.112   solute carrier family 25, member 27 
UCP2                  0.110   uncoupling protein 2 
SLC25A21              0.110   solute carrier family 25 (mitochondrial oxodicarboxy...
SLC25A19              0.107   solute carrier family 25, member 19 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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