Guide to the Human Genome
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Name: SLC25A10 Sequence: fasta or formatted (287aa) NCBI GI: 20149598
Description:

solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10

Referenced in:

Mitochondria
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         27           2
 C cysteine            2.8          8           2
 D aspartate           3.1          9           1
 E glutamate           3.1          9           2
 F phenylalanine       4.9         14           1
 G glycine             9.8         28           2
 H histidine           2.4          7           1
 I isoleucine          2.4          7           1
 K lysine              4.2         12           1
 L leucine            13.2         38           2
 M methionine          2.4          7           1
 N asparagine          2.1          6           1
 P proline             3.5         10           1
 Q glutamine           4.9         14           2
 R arginine            7.0         20           2
 S serine              6.3         18           2
 T threonine           5.9         17           1
 V valine              8.7         25           2
 W tryptophan          0.3          1           1
 Y tyrosine            3.5         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 25 (mitochondrial carrier; dic... 
SLC25A11              0.308   solute carrier family 25 (mitochondrial carrier; oxo...
UCP2                  0.259   uncoupling protein 2 
UCP1                  0.250   uncoupling protein 1 
UCP3                  0.246   uncoupling protein 3 isoform UCP3L 
SLC25A30              0.221   solute carrier family 25, member 30 
UCP3                  0.219   uncoupling protein 3 isoform UCP3S 
SLC25A27              0.204   solute carrier family 25, member 27 
SLC25A14              0.199   solute carrier family 25, member 14 isoform UCP5L [Ho...
SLC25A14              0.199   solute carrier family 25, member 14 isoform UCP5S [H...
SLC25A34              0.168   solute carrier family 25, member 34 
SLC25A1               0.115   solute carrier family 25 (mitochondrial carrier; cit...
SLC25A38              0.104   solute carrier family 25, member 38 
C14orf68              0.100   chromosome 14 open reading frame 68 
SLC25A22              0.093   mitochondrial glutamate carrier 1 
SLC25A45              0.091   solute carrier family 25, member 45 isoform a [Homo...
SLC25A12              0.091   solute carrier family 25, member 12 
SLC25A24              0.088   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.088   solute carrier family 25 member 24 isoform 2 
LOC100292202          0.086   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.086   PREDICTED: similar to solute carrier family 25, mem...
SLC25A25              0.086   solute carrier family 25, member 25 isoform c 
SLC25A25              0.086   solute carrier family 25, member 25 isoform a 
SLC25A25              0.086   solute carrier family 25, member 25 isoform d 
SLC25A25              0.086   solute carrier family 25, member 25 isoform b 
SLC25A13              0.086   solute carrier family 25, member 13 isoform 2 
SLC25A13              0.086   solute carrier family 25, member 13 isoform 1 [Homo...
SLC25A23              0.086   solute carrier family 25, member 23 
SLC25A35              0.082   solute carrier family 25, member 35 
SLC25A42              0.080   solute carrier family 25, member 42 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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