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Search of human proteins with 5803048
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5803048 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein
retention receptor 1 [Homo sapiens]
(212 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5803048 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein ... 430 e-121
gi|5803050 KDEL receptor 2 isoform 1 [Homo sapiens] 375 e-104
gi|6857802 KDEL receptor 3 isoform a [Homo sapiens] 326 1e-89
gi|8051611 KDEL receptor 3 isoform b [Homo sapiens] 307 4e-84
gi|154736713 KDEL receptor 2 isoform 2 [Homo sapiens] 198 2e-51
gi|89062505 PREDICTED: similar to KDEL receptor [Homo sapiens] 191 3e-49
gi|19913418 ATPase, H+ transporting, lysosomal V0 subunit a1 iso... 30 1.5
gi|194097403 ATPase, H+ transporting, lysosomal V0 subunit a1 is... 30 1.5
gi|194097401 ATPase, H+ transporting, lysosomal V0 subunit a1 is... 30 1.5
gi|239745529 PREDICTED: hypothetical protein XP_002343479 [Homo ... 28 4.4
gi|85797660 limkain b1 [Homo sapiens] 28 7.5
gi|49619231 solute carrier family 37 member 1 [Homo sapiens] 28 7.5
gi|223717983 solute carrier family 37 (glycerol-3-phosphate tran... 27 9.8
gi|38093649 solute carrier family 37 (glycerol-3-phosphate trans... 27 9.8
gi|68533260 chitinase 3-like 2 isoform c [Homo sapiens] 27 9.8
gi|68533253 chitinase 3-like 2 isoform b [Homo sapiens] 27 9.8
gi|68533255 chitinase 3-like 2 isoform a [Homo sapiens] 27 9.8
>gi|5803048 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein
retention receptor 1 [Homo sapiens]
Length = 212
Score = 430 bits (1106), Expect = e-121
Identities = 212/212 (100%), Positives = 212/212 (100%)
Query: 1 MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYN 60
MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYN
Sbjct: 1 MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYN 60
Query: 61 TCMKVVYIACSFTTVWLIYSKFKATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLEILW 120
TCMKVVYIACSFTTVWLIYSKFKATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLEILW
Sbjct: 61 TCMKVVYIACSFTTVWLIYSKFKATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLEILW 120
Query: 121 TFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRYHFEGFFDLIA 180
TFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRYHFEGFFDLIA
Sbjct: 121 TFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRYHFEGFFDLIA 180
Query: 181 IVAGLVQTVLYCDFFYLYITKVLKGKKLSLPA 212
IVAGLVQTVLYCDFFYLYITKVLKGKKLSLPA
Sbjct: 181 IVAGLVQTVLYCDFFYLYITKVLKGKKLSLPA 212
>gi|5803050 KDEL receptor 2 isoform 1 [Homo sapiens]
Length = 212
Score = 375 bits (963), Expect = e-104
Identities = 177/212 (83%), Positives = 199/212 (93%)
Query: 1 MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYN 60
MN+FR GDLSHL AI++LLLKIWK+RSCAGISGKSQ+LFA+VFT RYLDLFT++ISLYN
Sbjct: 1 MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60
Query: 61 TCMKVVYIACSFTTVWLIYSKFKATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLEILW 120
T MKV+Y+ACS+ TV+LIY KFKATYDGNHDTFRVEFLVVP L+FLVNHDF+PLEILW
Sbjct: 61 TSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLVNHDFSPLEILW 120
Query: 121 TFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRYHFEGFFDLIA 180
TFSIYLESVAILPQLFM+SKTGEAETIT+HYLF LG+YR LYL NWIWR++FEGFFDLIA
Sbjct: 121 TFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLVNWIWRFYFEGFFDLIA 180
Query: 181 IVAGLVQTVLYCDFFYLYITKVLKGKKLSLPA 212
+VAG+VQT+LYCDFFYLYITKVLKGKKLSLPA
Sbjct: 181 VVAGVVQTILYCDFFYLYITKVLKGKKLSLPA 212
>gi|6857802 KDEL receptor 3 isoform a [Homo sapiens]
Length = 214
Score = 326 bits (835), Expect = 1e-89
Identities = 154/211 (72%), Positives = 184/211 (87%)
Query: 1 MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYN 60
MN+FR LGDLSHLLA+ILLL KIW+S+ C GISGKSQ+LFA+VFT RYLDLFTN+IS+YN
Sbjct: 1 MNVFRILGDLSHLLAMILLLGKIWRSKCCKGISGKSQILFALVFTTRYLDLFTNFISIYN 60
Query: 61 TCMKVVYIACSFTTVWLIYSKFKATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLEILW 120
T MKVV++ C++ TV++IY KF+ T+D +DTFR+EFL+VP L+FL N+ FT LEILW
Sbjct: 61 TVMKVVFLLCAYVTVYMIYGKFRKTFDSENDTFRLEFLLVPVIGLSFLENYSFTLLEILW 120
Query: 121 TFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRYHFEGFFDLIA 180
TFSIYLESVAILPQLFM+SKTGEAETIT+HYLF LG+YR LYL NWI RY E F+D IA
Sbjct: 121 TFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLANWIRRYQTENFYDQIA 180
Query: 181 IVAGLVQTVLYCDFFYLYITKVLKGKKLSLP 211
+V+G+VQT+ YCDFFYLY+TKVLKGKKLSLP
Sbjct: 181 VVSGVVQTIFYCDFFYLYVTKVLKGKKLSLP 211
>gi|8051611 KDEL receptor 3 isoform b [Homo sapiens]
Length = 220
Score = 307 bits (787), Expect = 4e-84
Identities = 144/201 (71%), Positives = 174/201 (86%)
Query: 1 MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYN 60
MN+FR LGDLSHLLA+ILLL KIW+S+ C GISGKSQ+LFA+VFT RYLDLFTN+IS+YN
Sbjct: 1 MNVFRILGDLSHLLAMILLLGKIWRSKCCKGISGKSQILFALVFTTRYLDLFTNFISIYN 60
Query: 61 TCMKVVYIACSFTTVWLIYSKFKATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLEILW 120
T MKVV++ C++ TV++IY KF+ T+D +DTFR+EFL+VP L+FL N+ FT LEILW
Sbjct: 61 TVMKVVFLLCAYVTVYMIYGKFRKTFDSENDTFRLEFLLVPVIGLSFLENYSFTLLEILW 120
Query: 121 TFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRYHFEGFFDLIA 180
TFSIYLESVAILPQLFM+SKTGEAETIT+HYLF LG+YR LYL NWI RY E F+D IA
Sbjct: 121 TFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLANWIRRYQTENFYDQIA 180
Query: 181 IVAGLVQTVLYCDFFYLYITK 201
+V+G+VQT+ YCDFFYLY+TK
Sbjct: 181 VVSGVVQTIFYCDFFYLYVTK 201
>gi|154736713 KDEL receptor 2 isoform 2 [Homo sapiens]
Length = 186
Score = 198 bits (504), Expect = 2e-51
Identities = 93/117 (79%), Positives = 107/117 (91%)
Query: 1 MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYN 60
MN+FR GDLSHL AI++LLLKIWK+RSCAGISGKSQ+LFA+VFT RYLDLFT++ISLYN
Sbjct: 1 MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60
Query: 61 TCMKVVYIACSFTTVWLIYSKFKATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLE 117
T MKV+Y+ACS+ TV+LIY KFKATYDGNHDTFRVEFLVVP L+FLVNHDF+PLE
Sbjct: 61 TSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLVNHDFSPLE 117
>gi|89062505 PREDICTED: similar to KDEL receptor [Homo sapiens]
Length = 219
Score = 191 bits (486), Expect = 3e-49
Identities = 98/214 (45%), Positives = 144/214 (67%), Gaps = 9/214 (4%)
Query: 1 MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYN 60
M L R +GD+ HL AI++LL K+ + RS AGIS KS LFA+VF RY+D+ ++I +YN
Sbjct: 1 MALVRVVGDMLHLSAILILLSKMLRQRSAAGISLKSMELFAIVFCTRYIDVLFSFIGIYN 60
Query: 61 TCMKVVYIACSFTTVWLIYSK--FKATYDGNHDTFRVEFLVVPTAILAFLVNHDFTP--- 115
T MK+ +IA + +L+ K +KATYD +DTFR+ +L+VP +L+ L + TP
Sbjct: 61 TTMKIFFIASTLHICYLMKFKSPWKATYDRENDTFRIRYLIVPCVVLSILFHG--TPRRS 118
Query: 116 --LEILWTFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRYHFE 173
+E+ WTFS YLE+VAILPQ+F++ T + +TSHYLF LG YR +Y+ +W RY+
Sbjct: 119 IVIELCWTFSQYLEAVAILPQIFLLEYTERYDALTSHYLFCLGAYRVVYMIHWAIRYYIY 178
Query: 174 GFFDLIAIVAGLVQTVLYCDFFYLYITKVLKGKK 207
I++++G VQ++LY DFFY Y+ +VL+ K
Sbjct: 179 HKVRWISVLSGFVQSLLYVDFFYHYVVQVLRKAK 212
>gi|19913418 ATPase, H+ transporting, lysosomal V0 subunit a1
isoform c [Homo sapiens]
Length = 831
Score = 30.0 bits (66), Expect = 1.5
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 8 GDLSHLLAIILLLLKIWKS-RSCAGISGKSQ-VLFAVVFTARYLDLFTNYISLYNTCMKV 65
GD H I++ L +W R +S K++ +F+ VF+ RY+ L S+Y +
Sbjct: 408 GDFGH--GILMTLFAVWMVLRESRILSQKNENEMFSTVFSGRYIILLMGVFSMYT---GL 462
Query: 66 VYIAC------SFTTVWLIYSKFKATYDGNHDTFR 94
+Y C F + W + F TY+ +T R
Sbjct: 463 IYNDCFSKSLNIFGSSWSVRPMF--TYNWTEETLR 495
>gi|194097403 ATPase, H+ transporting, lysosomal V0 subunit a1
isoform b [Homo sapiens]
Length = 837
Score = 30.0 bits (66), Expect = 1.5
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 8 GDLSHLLAIILLLLKIWKS-RSCAGISGKSQ-VLFAVVFTARYLDLFTNYISLYNTCMKV 65
GD H I++ L +W R +S K++ +F+ VF+ RY+ L S+Y +
Sbjct: 408 GDFGH--GILMTLFAVWMVLRESRILSQKNENEMFSTVFSGRYIILLMGVFSMYT---GL 462
Query: 66 VYIAC------SFTTVWLIYSKFKATYDGNHDTFR 94
+Y C F + W + F TY+ +T R
Sbjct: 463 IYNDCFSKSLNIFGSSWSVRPMF--TYNWTEETLR 495
>gi|194097401 ATPase, H+ transporting, lysosomal V0 subunit a1
isoform a [Homo sapiens]
Length = 838
Score = 30.0 bits (66), Expect = 1.5
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 8 GDLSHLLAIILLLLKIWKS-RSCAGISGKSQ-VLFAVVFTARYLDLFTNYISLYNTCMKV 65
GD H I++ L +W R +S K++ +F+ VF+ RY+ L S+Y +
Sbjct: 415 GDFGH--GILMTLFAVWMVLRESRILSQKNENEMFSTVFSGRYIILLMGVFSMYT---GL 469
Query: 66 VYIAC------SFTTVWLIYSKFKATYDGNHDTFR 94
+Y C F + W + F TY+ +T R
Sbjct: 470 IYNDCFSKSLNIFGSSWSVRPMF--TYNWTEETLR 502
>gi|239745529 PREDICTED: hypothetical protein XP_002343479 [Homo
sapiens]
Length = 138
Score = 28.5 bits (62), Expect = 4.4
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 8 GDLSHLLAIILLLLKIWKSRS 28
G LS +L+ ILLLL++W SR+
Sbjct: 40 GTLSQMLSAILLLLQLWDSRA 60
>gi|85797660 limkain b1 [Homo sapiens]
Length = 1742
Score = 27.7 bits (60), Expect = 7.5
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 121 TFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRYHFEGFF 176
T + L+S+ L ++F K E +TS YLFA V L+ YH++ F
Sbjct: 1458 TLTELLKSLPYLVEVFTNDKMEECVKLTSLYLFAKNVRSLLH------TYHYQQIF 1507
>gi|49619231 solute carrier family 37 member 1 [Homo sapiens]
Length = 533
Score = 27.7 bits (60), Expect = 7.5
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 152 LFALGVYRTLYLFNWIWRYHFEGFFDLIAIVAGLVQT 188
+ A G + L+ + + H GF+ + ++ GLVQT
Sbjct: 134 MLASGAFTALFGLGYFYNIHSFGFYVVTQVINGLVQT 170
>gi|223717983 solute carrier family 37 (glycerol-3-phosphate
transporter), member 2 isoform 2 [Homo sapiens]
Length = 501
Score = 27.3 bits (59), Expect = 9.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 156 GVYRTLYLFNWIWRYHFEGFFDLIAIVAGLVQT 188
G++ +L+ + W H +F +I + GLVQT
Sbjct: 126 GLFTSLFGLGYFWNIHELWYFVVIQVCNGLVQT 158
>gi|38093649 solute carrier family 37 (glycerol-3-phosphate
transporter), member 2 isoform 1 [Homo sapiens]
Length = 505
Score = 27.3 bits (59), Expect = 9.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 156 GVYRTLYLFNWIWRYHFEGFFDLIAIVAGLVQT 188
G++ +L+ + W H +F +I + GLVQT
Sbjct: 126 GLFTSLFGLGYFWNIHELWYFVVIQVCNGLVQT 158
>gi|68533260 chitinase 3-like 2 isoform c [Homo sapiens]
Length = 311
Score = 27.3 bits (59), Expect = 9.8
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 92 TFRVEFLVVPTAILAFLVNHDFTPLEILWTF 122
T R+EF+ +I+ FL NH+F L++ W +
Sbjct: 40 TSRLEFI---NSIILFLRNHNFDGLDVSWIY 67
>gi|68533253 chitinase 3-like 2 isoform b [Homo sapiens]
Length = 380
Score = 27.3 bits (59), Expect = 9.8
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 92 TFRVEFLVVPTAILAFLVNHDFTPLEILWTF 122
T R+EF+ +I+ FL NH+F L++ W +
Sbjct: 109 TSRLEFI---NSIILFLRNHNFDGLDVSWIY 136
>gi|68533255 chitinase 3-like 2 isoform a [Homo sapiens]
Length = 390
Score = 27.3 bits (59), Expect = 9.8
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 92 TFRVEFLVVPTAILAFLVNHDFTPLEILWTF 122
T R+EF+ +I+ FL NH+F L++ W +
Sbjct: 119 TSRLEFI---NSIILFLRNHNFDGLDVSWIY 146
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.333 0.144 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,901,563
Number of Sequences: 37866
Number of extensions: 257525
Number of successful extensions: 568
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 555
Number of HSP's gapped (non-prelim): 17
length of query: 212
length of database: 18,247,518
effective HSP length: 98
effective length of query: 114
effective length of database: 14,536,650
effective search space: 1657178100
effective search space used: 1657178100
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.