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Search of human proteins with 57528144
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|57528144 SPANX family, member N5 [Homo sapiens]
(72 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|57528144 SPANX family, member N5 [Homo sapiens] 148 8e-37
gi|57528121 SPANX-N1 protein [Homo sapiens] 131 1e-31
gi|58801563 SPANX-N3 protein [Homo sapiens] 100 3e-22
gi|57634514 SPANX-N2 protein [Homo sapiens] 100 4e-22
gi|57528117 SPANX family, member N4 [Homo sapiens] 65 1e-11
gi|14192937 sperm protein associated with the nucleus, X chromos... 64 3e-11
gi|22027489 sperm protein associated with the nucleus, X chromos... 64 3e-11
gi|13435137 sperm protein associated with the nucleus, X chromos... 62 1e-10
gi|14192939 SPANX family, member D [Homo sapiens] 57 4e-09
gi|22027496 SPANX family, member E [Homo sapiens] 57 4e-09
gi|14196344 SPANX family, member B1 [Homo sapiens] 53 6e-08
gi|22027492 sperm protein associated with the nucleus, X chromos... 53 6e-08
gi|190570192 SPANX family, member F1 [Homo sapiens] 52 8e-08
gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 26 5.9
gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 26 5.9
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 26 7.7
>gi|57528144 SPANX family, member N5 [Homo sapiens]
Length = 72
Score = 148 bits (374), Expect = 8e-37
Identities = 72/72 (100%), Positives = 72/72 (100%)
Query: 1 MEKPTSSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKTK 60
MEKPTSSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKTK
Sbjct: 1 MEKPTSSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKTK 60
Query: 61 KIHSNQLENDQS 72
KIHSNQLENDQS
Sbjct: 61 KIHSNQLENDQS 72
>gi|57528121 SPANX-N1 protein [Homo sapiens]
Length = 72
Score = 131 bits (329), Expect = 1e-31
Identities = 62/72 (86%), Positives = 66/72 (91%)
Query: 1 MEKPTSSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKTK 60
ME+PTSS NGEKRKSPC+SN++NDEMQETPNRDL EPSLKKMKTSEYSTVL CYRK K
Sbjct: 1 MEQPTSSINGEKRKSPCESNNENDEMQETPNRDLAPEPSLKKMKTSEYSTVLAFCYRKAK 60
Query: 61 KIHSNQLENDQS 72
KIHSNQLENDQS
Sbjct: 61 KIHSNQLENDQS 72
>gi|58801563 SPANX-N3 protein [Homo sapiens]
Length = 141
Score = 100 bits (248), Expect = 3e-22
Identities = 52/73 (71%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 1 MEKPTSSTNGEKRKSPCDSNSK-NDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT 59
ME+PTSSTNGEK KSPC+SN+K NDEMQE PNR L E SLKK KTSEY + V RK
Sbjct: 1 MEQPTSSTNGEKTKSPCESNNKKNDEMQEVPNRVLAPEQSLKKTKTSEYPIIFVYYLRKG 60
Query: 60 KKIHSNQLENDQS 72
KKI+SNQLEN+QS
Sbjct: 61 KKINSNQLENEQS 73
>gi|57634514 SPANX-N2 protein [Homo sapiens]
Length = 180
Score = 99.8 bits (247), Expect = 4e-22
Identities = 51/73 (69%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 1 MEKPTSSTNGEKRKSPCDSNSK-NDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT 59
ME+PTSSTNGEKRKSPC+SN+K NDEMQE PNR L + SL+K KT EY T++V YRK
Sbjct: 1 MEQPTSSTNGEKRKSPCESNNKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKH 60
Query: 60 KKIHSNQLENDQS 72
KI+SNQLE DQS
Sbjct: 61 TKINSNQLEKDQS 73
>gi|57528117 SPANX family, member N4 [Homo sapiens]
Length = 99
Score = 64.7 bits (156), Expect = 1e-11
Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 1 MEKPTSSTNGEKRKSPCDSNS-KNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT 59
ME+PTSSTN K KSPC+SN K D+ ++ +R E SLK+ + ++Y T++ C RK
Sbjct: 1 MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYC-RKN 59
Query: 60 KKIHSNQLENDQ 71
KK +SNQLEN+Q
Sbjct: 60 KKRNSNQLENNQ 71
>gi|14192937 sperm protein associated with the nucleus, X
chromosome, family member A1 [Homo sapiens]
Length = 97
Score = 63.5 bits (153), Expect = 3e-11
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 6 SSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT-KKIHS 64
SS G KR PCDSN N+ M ETP D +P+ KKMKTSE ST+LV+ YR+ K+
Sbjct: 5 SSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNFKRTSP 64
Query: 65 NQLENDQS 72
+L ND +
Sbjct: 65 EELLNDHA 72
>gi|22027489 sperm protein associated with the nucleus, X
chromosome, family member A2 [Homo sapiens]
Length = 97
Score = 63.5 bits (153), Expect = 3e-11
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 6 SSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT-KKIHS 64
SS G KR PCDSN N+ M ETP D +P+ KKMKTSE ST+LV+ YR+ K+
Sbjct: 5 SSAGGVKRSVPCDSNEANEMMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNFKRTSP 64
Query: 65 NQLENDQS 72
+L ND +
Sbjct: 65 EELLNDHA 72
>gi|13435137 sperm protein associated with the nucleus, X
chromosome, family member C [Homo sapiens]
Length = 97
Score = 62.0 bits (149), Expect = 1e-10
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 6 SSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRK-TKKIHS 64
SS G KR PC+SN N+ M ETP D +P+ KKMKTSE ST+LV+ YR+ K+
Sbjct: 5 SSAGGVKRSVPCESNEVNETMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRNVKRTSP 64
Query: 65 NQLENDQS 72
+L ND +
Sbjct: 65 EELLNDHA 72
>gi|14192939 SPANX family, member D [Homo sapiens]
Length = 97
Score = 56.6 bits (135), Expect = 4e-09
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 6 SSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT-KKIHS 64
SS G KR PCDSN N+ M ET + +P+ KK+KTSE ST+LV+ YR+ K+
Sbjct: 5 SSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNFKRTSP 64
Query: 65 NQLENDQS 72
+L ND +
Sbjct: 65 EELVNDHA 72
>gi|22027496 SPANX family, member E [Homo sapiens]
Length = 97
Score = 56.6 bits (135), Expect = 4e-09
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 6 SSTNGEKRKSPCDSNSKNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRK-TKKIHS 64
SS G KR PCDSN N+ M ET + +P+ KK+KTSE ST+LV+ YR+ K+
Sbjct: 5 SSAGGVKRSVPCDSNEANEMMPETSSGYSDPQPAPKKLKTSESSTILVVRYRRNVKRTSP 64
Query: 65 NQLENDQS 72
+L ND +
Sbjct: 65 EELVNDHA 72
>gi|14196344 SPANX family, member B1 [Homo sapiens]
Length = 103
Score = 52.8 bits (125), Expect = 6e-08
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 6 SSTNGEKRKSPCDSNSKNDE------MQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRK- 58
SS KR PC+SN N+ M ETP D +P+ KKMKTSE ST+LV+ YR+
Sbjct: 5 SSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRN 64
Query: 59 TKKIHSNQLENDQS 72
K+ +L ND +
Sbjct: 65 VKRTSPEELVNDHA 78
>gi|22027492 sperm protein associated with the nucleus, X
chromosome, family member B2 [Homo sapiens]
Length = 103
Score = 52.8 bits (125), Expect = 6e-08
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 6 SSTNGEKRKSPCDSNSKNDE------MQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRK- 58
SS KR PC+SN N+ M ETP D +P+ KKMKTSE ST+LV+ YR+
Sbjct: 5 SSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRN 64
Query: 59 TKKIHSNQLENDQS 72
K+ +L ND +
Sbjct: 65 VKRTSPEELVNDHA 78
>gi|190570192 SPANX family, member F1 [Homo sapiens]
Length = 103
Score = 52.4 bits (124), Expect = 8e-08
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 6 SSTNGEKRKSPCDSNSKNDE------MQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRK- 58
SS KR PC+SN N+ M ETP D +P+ KKMKTSE ST+LV+ YR+
Sbjct: 5 SSVRRLKRSVPCESNEANEANEANKTMPETPTGDSDPQPAPKKMKTSESSTILVVRYRRN 64
Query: 59 TKKIHSNQLENDQS 72
K+ +L ND +
Sbjct: 65 VKRTSPEELLNDHA 78
>gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
Length = 839
Score = 26.2 bits (56), Expect = 5.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 17 CDSNSKNDEMQETPNRDLVLEPSLKKMKTSE 47
C+ K D Q P ++++ +PS K+M SE
Sbjct: 504 CEFQGKLDRKQGIPMKEILGQPSSKRMNYSE 534
>gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
Length = 839
Score = 26.2 bits (56), Expect = 5.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 17 CDSNSKNDEMQETPNRDLVLEPSLKKMKTSE 47
C+ K D Q P ++++ +PS K+M SE
Sbjct: 504 CEFQGKLDRKQGIPMKEILGQPSSKRMNYSE 534
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 25.8 bits (55), Expect = 7.7
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 23 NDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKTKKIHSNQLEND 70
N ++QE +LE LK +++S+ T++V K ++ Q E D
Sbjct: 1678 NTKLQEREREVHILEEKLKSVESSQSETLIVPRSAKNVAAYTEQEEAD 1725
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.302 0.118 0.318
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,830,725
Number of Sequences: 37866
Number of extensions: 98039
Number of successful extensions: 208
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 185
Number of HSP's gapped (non-prelim): 16
length of query: 72
length of database: 18,247,518
effective HSP length: 45
effective length of query: 27
effective length of database: 16,543,548
effective search space: 446675796
effective search space used: 446675796
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.