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Search of human proteins with 56788399
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56788399 mitogen-activated protein kinase associated protein
1 isoform 4 [Homo sapiens]
(330 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56788407 mitogen-activated protein kinase associated protein ... 655 0.0
gi|56788403 mitogen-activated protein kinase associated protein ... 655 0.0
gi|56788399 mitogen-activated protein kinase associated protein ... 655 0.0
gi|13129138 mitogen-activated protein kinase associated protein ... 565 e-161
gi|56788405 mitogen-activated protein kinase associated protein ... 535 e-152
gi|56788401 mitogen-activated protein kinase associated protein ... 256 1e-68
gi|189491759 p21-activated kinase 3 isoform d [Homo sapiens] 30 3.0
gi|189491757 p21-activated kinase 3 isoform c [Homo sapiens] 30 3.0
gi|189491755 p21-activated kinase 3 isoform b [Homo sapiens] 30 3.0
gi|189491753 p21-activated kinase 3 isoform a [Homo sapiens] 30 3.0
gi|189491751 p21-activated kinase 3 isoform a [Homo sapiens] 30 3.0
gi|4505601 p21-activated kinase 3 isoform a [Homo sapiens] 30 3.0
gi|190014625 DIS3 mitotic control isoform b [Homo sapiens] 30 3.0
gi|190014623 DIS3 mitotic control isoform a [Homo sapiens] 30 3.0
gi|4885583 Rho-associated, coiled-coil containing protein kinase... 28 8.6
gi|109637795 E2F transcription factor 6 [Homo sapiens] 28 8.6
gi|209862893 zinc finger, MYND-type containing 15 isoform 1 [Hom... 28 8.6
gi|14149999 zinc finger, MYND-type containing 15 isoform 2 [Homo... 28 8.6
>gi|56788407 mitogen-activated protein kinase associated protein 1
isoform 1 [Homo sapiens]
Length = 522
Score = 655 bits (1690), Expect = 0.0
Identities = 330/330 (100%), Positives = 330/330 (100%)
Query: 1 MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE 60
MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE
Sbjct: 193 MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE 252
Query: 61 PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR 120
PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR
Sbjct: 253 PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR 312
Query: 121 KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA 180
KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA
Sbjct: 313 KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA 372
Query: 181 TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI 240
TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI
Sbjct: 373 TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI 432
Query: 241 DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST 300
DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST
Sbjct: 433 DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST 492
Query: 301 ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 330
ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ
Sbjct: 493 ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 522
>gi|56788403 mitogen-activated protein kinase associated protein 1
isoform 4 [Homo sapiens]
Length = 330
Score = 655 bits (1690), Expect = 0.0
Identities = 330/330 (100%), Positives = 330/330 (100%)
Query: 1 MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE 60
MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE
Sbjct: 1 MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE 60
Query: 61 PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR 120
PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR
Sbjct: 61 PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR 120
Query: 121 KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA 180
KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA
Sbjct: 121 KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA 180
Query: 181 TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI 240
TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI
Sbjct: 181 TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI 240
Query: 241 DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST 300
DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST
Sbjct: 241 DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST 300
Query: 301 ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 330
ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ
Sbjct: 301 ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 330
>gi|56788399 mitogen-activated protein kinase associated protein 1
isoform 4 [Homo sapiens]
Length = 330
Score = 655 bits (1690), Expect = 0.0
Identities = 330/330 (100%), Positives = 330/330 (100%)
Query: 1 MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE 60
MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE
Sbjct: 1 MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE 60
Query: 61 PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR 120
PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR
Sbjct: 61 PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR 120
Query: 121 KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA 180
KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA
Sbjct: 121 KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA 180
Query: 181 TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI 240
TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI
Sbjct: 181 TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI 240
Query: 241 DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST 300
DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST
Sbjct: 241 DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST 300
Query: 301 ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 330
ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ
Sbjct: 301 ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 330
>gi|13129138 mitogen-activated protein kinase associated protein 1
isoform 2 [Homo sapiens]
Length = 486
Score = 565 bits (1456), Expect = e-161
Identities = 294/330 (89%), Positives = 294/330 (89%), Gaps = 36/330 (10%)
Query: 1 MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE 60
MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE
Sbjct: 193 MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE 252
Query: 61 PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR 120
PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR
Sbjct: 253 PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR 312
Query: 121 KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA 180
KGSQKVSG SRADGVFEEDSQIDIA
Sbjct: 313 KGSQKVSG------------------------------------SRADGVFEEDSQIDIA 336
Query: 181 TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI 240
TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI
Sbjct: 337 TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI 396
Query: 241 DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST 300
DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST
Sbjct: 397 DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST 456
Query: 301 ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 330
ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ
Sbjct: 457 ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 486
>gi|56788405 mitogen-activated protein kinase associated protein 1
isoform 3 [Homo sapiens]
Length = 475
Score = 535 bits (1377), Expect = e-152
Identities = 280/330 (84%), Positives = 280/330 (84%), Gaps = 47/330 (14%)
Query: 1 MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE 60
MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE
Sbjct: 193 MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE 252
Query: 61 PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR 120
PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR
Sbjct: 253 PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR 312
Query: 121 KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSSRADGVFEEDSQIDIA 180
KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENS D
Sbjct: 313 KGSQKVSGPQYRLEKQSEPNVAVDLDSTLESQSAWEFCLVRENSISGD------------ 360
Query: 181 TVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISI 240
KVEIDPVTNQKASTKFWIKQKPISI
Sbjct: 361 -----------------------------------KVEIDPVTNQKASTKFWIKQKPISI 385
Query: 241 DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST 300
DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST
Sbjct: 386 DSDLLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRAST 445
Query: 301 ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 330
ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ
Sbjct: 446 ARADYFAQKQRKLNRRTSFSFQKEKKSGQQ 475
>gi|56788401 mitogen-activated protein kinase associated protein 1
isoform 5 [Homo sapiens]
Length = 323
Score = 256 bits (655), Expect = 1e-68
Identities = 128/128 (100%), Positives = 128/128 (100%)
Query: 1 MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE 60
MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE
Sbjct: 193 MTVVTMASARVQDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNE 252
Query: 61 PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR 120
PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR
Sbjct: 253 PIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRR 312
Query: 121 KGSQKVSG 128
KGSQKVSG
Sbjct: 313 KGSQKVSG 320
>gi|189491759 p21-activated kinase 3 isoform d [Homo sapiens]
Length = 559
Score = 30.0 bits (66), Expect = 3.0
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 44 EDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLI--- 100
E++ E + + PP+ + P H T ++VE +SP + +KE A+ +L
Sbjct: 193 EEEEEDENEPPPVIAPRPEHTKSIYTRSVVESIASPAVPNKEVTPPSAENANSSTLYRNT 252
Query: 101 --QVDNTKVTMKEILLK 115
Q +K+T +EIL K
Sbjct: 253 DRQRKKSKMTDEEILEK 269
>gi|189491757 p21-activated kinase 3 isoform c [Homo sapiens]
Length = 565
Score = 30.0 bits (66), Expect = 3.0
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 44 EDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLI--- 100
E++ E + + PP+ + P H T ++VE +SP + +KE A+ +L
Sbjct: 199 EEEEEDENEPPPVIAPRPEHTKSIYTRSVVESIASPAVPNKEVTPPSAENANSSTLYRNT 258
Query: 101 --QVDNTKVTMKEILLK 115
Q +K+T +EIL K
Sbjct: 259 DRQRKKSKMTDEEILEK 275
>gi|189491755 p21-activated kinase 3 isoform b [Homo sapiens]
Length = 580
Score = 30.0 bits (66), Expect = 3.0
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 44 EDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLI--- 100
E++ E + + PP+ + P H T ++VE +SP + +KE A+ +L
Sbjct: 214 EEEEEDENEPPPVIAPRPEHTKSIYTRSVVESIASPAVPNKEVTPPSAENANSSTLYRNT 273
Query: 101 --QVDNTKVTMKEILLK 115
Q +K+T +EIL K
Sbjct: 274 DRQRKKSKMTDEEILEK 290
>gi|189491753 p21-activated kinase 3 isoform a [Homo sapiens]
Length = 544
Score = 30.0 bits (66), Expect = 3.0
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 44 EDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLI--- 100
E++ E + + PP+ + P H T ++VE +SP + +KE A+ +L
Sbjct: 178 EEEEEDENEPPPVIAPRPEHTKSIYTRSVVESIASPAVPNKEVTPPSAENANSSTLYRNT 237
Query: 101 --QVDNTKVTMKEILLK 115
Q +K+T +EIL K
Sbjct: 238 DRQRKKSKMTDEEILEK 254
>gi|189491751 p21-activated kinase 3 isoform a [Homo sapiens]
Length = 544
Score = 30.0 bits (66), Expect = 3.0
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 44 EDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLI--- 100
E++ E + + PP+ + P H T ++VE +SP + +KE A+ +L
Sbjct: 178 EEEEEDENEPPPVIAPRPEHTKSIYTRSVVESIASPAVPNKEVTPPSAENANSSTLYRNT 237
Query: 101 --QVDNTKVTMKEILLK 115
Q +K+T +EIL K
Sbjct: 238 DRQRKKSKMTDEEILEK 254
>gi|4505601 p21-activated kinase 3 isoform a [Homo sapiens]
Length = 544
Score = 30.0 bits (66), Expect = 3.0
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 44 EDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKESLFVRINAAHGFSLI--- 100
E++ E + + PP+ + P H T ++VE +SP + +KE A+ +L
Sbjct: 178 EEEEEDENEPPPVIAPRPEHTKSIYTRSVVESIASPAVPNKEVTPPSAENANSSTLYRNT 237
Query: 101 --QVDNTKVTMKEILLK 115
Q +K+T +EIL K
Sbjct: 238 DRQRKKSKMTDEEILEK 254
>gi|190014625 DIS3 mitotic control isoform b [Homo sapiens]
Length = 928
Score = 30.0 bits (66), Expect = 3.0
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 72 LVEKYSSPGLTSKESLF-----VRINAAHGFSLIQVDNTKVTMKEILLKAVKRRKGSQKV 126
L K++ + SK SL +RI++A+ I + +LK + KG+ +
Sbjct: 543 LKTKFTKSVINSKASLTYAEAQLRIDSANMNDDITTSLRGLNKLAKILKKRRIEKGALTL 602
Query: 127 SGPQYRLEKQSEPNVAVDLDS--TLESQSAWEFCLVRENSSRADGVFEEDSQ 176
S P+ R SE + +DL + E+ S E ++ N S A + EE S+
Sbjct: 603 SSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSE 654
>gi|190014623 DIS3 mitotic control isoform a [Homo sapiens]
Length = 958
Score = 30.0 bits (66), Expect = 3.0
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 72 LVEKYSSPGLTSKESLF-----VRINAAHGFSLIQVDNTKVTMKEILLKAVKRRKGSQKV 126
L K++ + SK SL +RI++A+ I + +LK + KG+ +
Sbjct: 573 LKTKFTKSVINSKASLTYAEAQLRIDSANMNDDITTSLRGLNKLAKILKKRRIEKGALTL 632
Query: 127 SGPQYRLEKQSEPNVAVDLDS--TLESQSAWEFCLVRENSSRADGVFEEDSQ 176
S P+ R SE + +DL + E+ S E ++ N S A + EE S+
Sbjct: 633 SSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSE 684
>gi|4885583 Rho-associated, coiled-coil containing protein kinase 1
[Homo sapiens]
Length = 1354
Score = 28.5 bits (62), Expect = 8.6
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 27 REPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLTSKES 86
R+PK V++ CL D D DFP L N+ I F + K + +++
Sbjct: 19 RDPK--SEVNSDCLLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDY 76
Query: 87 LFVRINAAHGFSLIQVDNTKVTMKEILLKAVKR 119
V++ F +Q+ K T K +K + +
Sbjct: 77 EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK 109
>gi|109637795 E2F transcription factor 6 [Homo sapiens]
Length = 281
Score = 28.5 bits (62), Expect = 8.6
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 194 FKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEE 253
F VS+++ R D+ G ++++ K +TK ++++ + +++L DL E+
Sbjct: 64 FDVSLVYLTRKFMDLVRSAPGGILDLN-----KVATKLGVRKRRVYDITNVLDGIDLVEK 118
Query: 254 KSPSHAIFKLTYLSN 268
KS +H + + LSN
Sbjct: 119 KSKNHIRWIGSDLSN 133
>gi|209862893 zinc finger, MYND-type containing 15 isoform 1 [Homo
sapiens]
Length = 742
Score = 28.5 bits (62), Expect = 8.6
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Query: 84 KESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRRKGSQKVSGPQYRLEKQSEPNVAV 143
++SL V + G S TK + RR KVS Y L + +P++ +
Sbjct: 561 RDSLEVSVRPGSGISARPSSGTK--------EKGGRRDLQIKVSARPYHLFQGPKPDLVI 612
Query: 144 DLDSTLESQSAWEFCLVRENSSRADGVFEEDSQ 176
+S + W L R S R F E S+
Sbjct: 613 GFNSGFALKDTWLRSLPRLQSLRVPAFFTESSE 645
>gi|14149999 zinc finger, MYND-type containing 15 isoform 2 [Homo
sapiens]
Length = 703
Score = 28.5 bits (62), Expect = 8.6
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Query: 84 KESLFVRINAAHGFSLIQVDNTKVTMKEILLKAVKRRKGSQKVSGPQYRLEKQSEPNVAV 143
++SL V + G S TK + RR KVS Y L + +P++ +
Sbjct: 522 RDSLEVSVRPGSGISARPSSGTK--------EKGGRRDLQIKVSARPYHLFQGPKPDLVI 573
Query: 144 DLDSTLESQSAWEFCLVRENSSRADGVFEEDSQ 176
+S + W L R S R F E S+
Sbjct: 574 GFNSGFALKDTWLRSLPRLQSLRVPAFFTESSE 606
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,215,930
Number of Sequences: 37866
Number of extensions: 454201
Number of successful extensions: 1043
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1029
Number of HSP's gapped (non-prelim): 20
length of query: 330
length of database: 18,247,518
effective HSP length: 103
effective length of query: 227
effective length of database: 14,347,320
effective search space: 3256841640
effective search space used: 3256841640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.