Guide to the Human Genome
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Name: TPPP3 Sequence: fasta or formatted (176aa) NCBI GI: 56676377
Description:

tubulin polymerization-promoting protein family member 3

Referenced in:

Additional Brain Proteins

Other entries for this name:
alt mRNA [176aa] tubulin polymerization-promoting protein family member 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         20           2
 C cysteine            1.7          3           1
 D aspartate           8.0         14           2
 E glutamate           6.8         12           2
 F phenylalanine       4.0          7           1
 G glycine            10.8         19           2
 H histidine           1.1          2           1
 I isoleucine          3.4          6           1
 K lysine             14.8         26           2
 L leucine             4.0          7           1
 M methionine          1.7          3           1
 N asparagine          2.8          5           1
 P proline             1.1          2           1
 Q glutamine           1.7          3           1
 R arginine            4.0          7           1
 S serine              6.8         12           1
 T threonine           5.7         10           1
 V valine              6.8         12           1
 W tryptophan          0.6          1           1
 Y tyrosine            2.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tubulin polymerization-promoting protein family memb... 
TPPP3                 1.000   tubulin polymerization-promoting protein family memb...
TPPP                  0.649   tubulin polymerization promoting protein 
TPPP2                 0.607   tubulin polymerization-promoting protein family mem...
C1orf125              0.021   hypothetical protein LOC126859 isoform 1 
RNF219                0.012   ring finger protein 219 
TNNC2                 0.009   fast skeletal muscle troponin C 
ZNF721                0.009   zinc finger protein 721 
WDR87                 0.006   NYD-SP11 protein 
XPC                   0.006   xeroderma pigmentosum, complementation group C isof...
XPC                   0.006   xeroderma pigmentosum, complementation group C isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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