Search of human proteins with 55769589

Search of human proteins with 55769589

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|55769589 transmembrane protein 63B [Homo sapiens]
         (832 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|55769589 transmembrane protein 63B [Homo sapiens]                 1704   0.0  
gi|7662308 transmembrane protein 63A [Homo sapiens]                   923   0.0  
gi|190341095 transmembrane protein 63C [Homo sapiens]                 677   0.0  
gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]            33   0.83 
gi|195927030 Cas-Br-M (murine) ecotropic retroviral transforming...    33   0.83 
gi|195927027 Cas-Br-M (murine) ecotropic retroviral transforming...    33   0.83 
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]     32   2.4  
gi|6912276 cysteine-rich hydrophobic domain 2 [Homo sapiens]           31   4.1  
gi|210147567 hypothetical protein LOC220081 [Homo sapiens]             31   5.4  
gi|5453844 TAF6-like RNA polymerase II [Homo sapiens]                  31   5.4  
gi|134254443 pecanex-like 2 [Homo sapiens]                             31   5.4  
gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]           30   7.1  
gi|110835710 sodium channel, voltage-gated, type X, alpha [Homo ...    30   7.1  
gi|194097382 ADP-ribosyltransferase 3 isoform c [Homo sapiens]         30   7.1  
gi|194097380 ADP-ribosyltransferase 3 isoform a [Homo sapiens]         30   7.1  
gi|21361167 ADP-ribosyltransferase 3 isoform b [Homo sapiens]          30   7.1  
gi|157743245 WD repeat domain 43 [Homo sapiens]                        30   7.1  
gi|4505085 melanoma antigen family B, 4 [Homo sapiens]                 30   9.2  
gi|18426904 Werner helicase interacting protein isoform 2 [Homo ...    30   9.2  
gi|18426902 Werner helicase interacting protein isoform 1 [Homo ...    30   9.2  
gi|170932512 FERM domain containing 1 isoform 2 [Homo sapiens]         30   9.2  
gi|170932510 FERM domain containing 1 isoform 1 [Homo sapiens]         30   9.2  

>gi|55769589 transmembrane protein 63B [Homo sapiens]
          Length = 832

 Score = 1704 bits (4412), Expect = 0.0
 Identities = 832/832 (100%), Positives = 832/832 (100%)

Query: 1   MLPFLLATLGTTALNNSNPKDYCYSARIRSTVLQGLPFGGVPTVLALDFMCFLALLFLFS 60
           MLPFLLATLGTTALNNSNPKDYCYSARIRSTVLQGLPFGGVPTVLALDFMCFLALLFLFS
Sbjct: 1   MLPFLLATLGTTALNNSNPKDYCYSARIRSTVLQGLPFGGVPTVLALDFMCFLALLFLFS 60

Query: 61  ILRKVAWDYGRLALVTDADRLRRQERDRVEQEYVASAMHGDSHDRYERLTSVSSSVDFDQ 120
           ILRKVAWDYGRLALVTDADRLRRQERDRVEQEYVASAMHGDSHDRYERLTSVSSSVDFDQ
Sbjct: 61  ILRKVAWDYGRLALVTDADRLRRQERDRVEQEYVASAMHGDSHDRYERLTSVSSSVDFDQ 120

Query: 121 RDNGFCSWLTAIFRIKDDEIRDKCGGDAVHYLSFQRHIIGLLVVVGVLSVGIVLPVNFSG 180
           RDNGFCSWLTAIFRIKDDEIRDKCGGDAVHYLSFQRHIIGLLVVVGVLSVGIVLPVNFSG
Sbjct: 121 RDNGFCSWLTAIFRIKDDEIRDKCGGDAVHYLSFQRHIIGLLVVVGVLSVGIVLPVNFSG 180

Query: 181 DLLENNAYSFGRTTIANLKSGNNLLWLHTSFAFLYLLLTVYSMRRHTSKMRYKEDDLVKR 240
           DLLENNAYSFGRTTIANLKSGNNLLWLHTSFAFLYLLLTVYSMRRHTSKMRYKEDDLVKR
Sbjct: 181 DLLENNAYSFGRTTIANLKSGNNLLWLHTSFAFLYLLLTVYSMRRHTSKMRYKEDDLVKR 240

Query: 241 TLFINGISKYAESEKIKKHFEEAYPNCTVLEARPCYNVARLMFLDAERKKAERGKLYFTN 300
           TLFINGISKYAESEKIKKHFEEAYPNCTVLEARPCYNVARLMFLDAERKKAERGKLYFTN
Sbjct: 241 TLFINGISKYAESEKIKKHFEEAYPNCTVLEARPCYNVARLMFLDAERKKAERGKLYFTN 300

Query: 301 LQSKENVPTMINPKPCGHLCCCVVRGCEQVEAIEYYTKLEQKLKEDYKREKEKVNEKPLG 360
           LQSKENVPTMINPKPCGHLCCCVVRGCEQVEAIEYYTKLEQKLKEDYKREKEKVNEKPLG
Sbjct: 301 LQSKENVPTMINPKPCGHLCCCVVRGCEQVEAIEYYTKLEQKLKEDYKREKEKVNEKPLG 360

Query: 361 MAFVTFHNETITAIILKDFNVCKCQGCTCRGEPRPSSCSESLHISNWTVSYAPDPQNIYW 420
           MAFVTFHNETITAIILKDFNVCKCQGCTCRGEPRPSSCSESLHISNWTVSYAPDPQNIYW
Sbjct: 361 MAFVTFHNETITAIILKDFNVCKCQGCTCRGEPRPSSCSESLHISNWTVSYAPDPQNIYW 420

Query: 421 EHLSIRGFIWWLRCLVINVVLFILLFFLTTPAIIITTMDKFNVTKPVEYLNNPIITQFFP 480
           EHLSIRGFIWWLRCLVINVVLFILLFFLTTPAIIITTMDKFNVTKPVEYLNNPIITQFFP
Sbjct: 421 EHLSIRGFIWWLRCLVINVVLFILLFFLTTPAIIITTMDKFNVTKPVEYLNNPIITQFFP 480

Query: 481 TLLLWCFSALLPTIVYYSAFFEAHWTRSGENRTTMHKCYTFLIFMVLLLPSLGLSSLDLF 540
           TLLLWCFSALLPTIVYYSAFFEAHWTRSGENRTTMHKCYTFLIFMVLLLPSLGLSSLDLF
Sbjct: 481 TLLLWCFSALLPTIVYYSAFFEAHWTRSGENRTTMHKCYTFLIFMVLLLPSLGLSSLDLF 540

Query: 541 FRWLFDKKFLAEAAIRFECVFLPDNGAFFVNYVIASAFIGNAMDLLRIPGLLMYMIRLCL 600
           FRWLFDKKFLAEAAIRFECVFLPDNGAFFVNYVIASAFIGNAMDLLRIPGLLMYMIRLCL
Sbjct: 541 FRWLFDKKFLAEAAIRFECVFLPDNGAFFVNYVIASAFIGNAMDLLRIPGLLMYMIRLCL 600

Query: 601 ARSAAERRNVKRHQAYEFQFGAAYAWMMCVFTVVMTYSITCPIIVPFGLMYMLLKHLVDR 660
           ARSAAERRNVKRHQAYEFQFGAAYAWMMCVFTVVMTYSITCPIIVPFGLMYMLLKHLVDR
Sbjct: 601 ARSAAERRNVKRHQAYEFQFGAAYAWMMCVFTVVMTYSITCPIIVPFGLMYMLLKHLVDR 660

Query: 661 YNLYYAYLPAKLDKKIHSGAVNQVVAAPILCLFWLLFFSTMRTGFLAPTSMFTFVVLVIT 720
           YNLYYAYLPAKLDKKIHSGAVNQVVAAPILCLFWLLFFSTMRTGFLAPTSMFTFVVLVIT
Sbjct: 661 YNLYYAYLPAKLDKKIHSGAVNQVVAAPILCLFWLLFFSTMRTGFLAPTSMFTFVVLVIT 720

Query: 721 IVICLCHVCFGHFKYLSAHNYKIEHTETDTVDPRSNGRPPTAAAVPKSAKYIAQVLQDSE 780
           IVICLCHVCFGHFKYLSAHNYKIEHTETDTVDPRSNGRPPTAAAVPKSAKYIAQVLQDSE
Sbjct: 721 IVICLCHVCFGHFKYLSAHNYKIEHTETDTVDPRSNGRPPTAAAVPKSAKYIAQVLQDSE 780

Query: 781 VDGDGDGAPGSSGDEPPSSSSQDEELLMPPDALTDTDFQSCEDSLIENEIHQ 832
           VDGDGDGAPGSSGDEPPSSSSQDEELLMPPDALTDTDFQSCEDSLIENEIHQ
Sbjct: 781 VDGDGDGAPGSSGDEPPSSSSQDEELLMPPDALTDTDFQSCEDSLIENEIHQ 832


>gi|7662308 transmembrane protein 63A [Homo sapiens]
          Length = 807

 Score =  923 bits (2385), Expect = 0.0
 Identities = 443/752 (58%), Positives = 568/752 (75%), Gaps = 26/752 (3%)

Query: 19  PKD-YCYSARIRSTVLQGLPFGGVPTVLALDFMCFLALLFLFSILRKVAWDYGRLALVTD 77
           P D YCY++   STVLQG+ FGG+PTVL +D  CFL L+ +FSI+R+  WDYGR+ALV++
Sbjct: 27  PNDSYCYNSAKNSTVLQGVTFGGIPTVLLIDVSCFLFLILVFSIIRRRFWDYGRIALVSE 86

Query: 78  ADRLRRQERDRVEQEYVASAMHGDSHDRYERLTSVSSSVDFD-QRDNGFCSWLTAIFRIK 136
           AD                      S  R++RL+S SSS   D + + G C WLTAIFR+ 
Sbjct: 87  AD----------------------SESRFQRLSSTSSSGQQDFENELGCCPWLTAIFRLH 124

Query: 137 DDEIRDKCGGDAVHYLSFQRHIIGLLVVVGVLSVGIVLPVNFSGDLLENNAYSFGRTTIA 196
           DD+I + CG DA+HYLSFQRHII LLVVV  LS+ ++LPVN SGDLL+ + YSFGRTTIA
Sbjct: 125 DDQILEWCGEDAIHYLSFQRHIIFLLVVVSFLSLCVILPVNLSGDLLDKDPYSFGRTTIA 184

Query: 197 NLKSGNNLLWLHTSFAFLYLLLTVYSMRRHTSKMRYKEDDLVKRTLFINGISKYAESEKI 256
           NL++ N+LLWLHT FA +YL  TV  MR HT  ++YKE++LV+RTLFI G+ + A  E +
Sbjct: 185 NLQTDNDLLWLHTIFAVIYLFFTVGFMRHHTQSIKYKEENLVRRTLFITGLPRDARKETV 244

Query: 257 KKHFEEAYPNCTVLEARPCYNVARLMFLDAERKKAERGKLYFTNLQSKENVPTMINPKPC 316
           + HF +AYP C V++ + CYNVA+L++L  E+KK E+   Y+TNLQ K    T+INPKPC
Sbjct: 245 ESHFRDAYPTCEVVDVQLCYNVAKLIYLCKEKKKTEKSLTYYTNLQVKTGQRTLINPKPC 304

Query: 317 GHLCCCVVRGCEQVEAIEYYTKLEQKLKEDYKREKEKVNEKPLGMAFVTFHNETITAIIL 376
           G  CCC V GCE  +AI YYT+++ +L E    E+  V ++PLGMAFVTF  +++   IL
Sbjct: 305 GQFCCCEVLGCEWEDAISYYTRMKDRLLERITEEERHVQDQPLGMAFVTFQEKSMATYIL 364

Query: 377 KDFNVCKCQGCTCRGEPRPSSCSESLHISNWTVSYAPDPQNIYWEHLSIRGFIWWLRCLV 436
           KDFN CKCQ   C+GEP+PSS S  L+ S WTV++A DP++I W++LSI+G  WWL+ L 
Sbjct: 365 KDFNACKCQSLQCKGEPQPSSHSRELYTSKWTVTFAADPEDICWKNLSIQGLRWWLQWLG 424

Query: 437 INVVLFILLFFLTTPAIIITTMDKFNVTKPVEYLNNPIITQFFPTLLLWCFSALLPTIVY 496
           IN  LF+ LFFLTTP+II++TMDKFNVTKP+  LNNPII+QFFPTLLLW FSALLP+IVY
Sbjct: 425 INFTLFLGLFFLTTPSIILSTMDKFNVTKPIHALNNPIISQFFPTLLLWSFSALLPSIVY 484

Query: 497 YSAFFEAHWTRSGENRTTMHKCYTFLIFMVLLLPSLGLSSLDLFFRWLFDKKFLAEAAIR 556
           YS   E+HWT+SGEN+  M K Y FLIFMVL+LPSLGL+SLD FFRWLFDK   +EA+IR
Sbjct: 485 YSTLLESHWTKSGENQIMMTKVYIFLIFMVLILPSLGLTSLDFFFRWLFDKT-SSEASIR 543

Query: 557 FECVFLPDNGAFFVNYVIASAFIGNAMDLLRIPGLLMYMIRLCLARSAAERRNVKRHQAY 616
            ECVFLPD GAFFVNYVIASAFIGN M+LLR+PGL++Y  R+ +A++AA+RRNVK++QA+
Sbjct: 544 LECVFLPDQGAFFVNYVIASAFIGNGMELLRLPGLILYTFRMIMAKTAADRRNVKQNQAF 603

Query: 617 EFQFGAAYAWMMCVFTVVMTYSITCPIIVPFGLMYMLLKHLVDRYNLYYAYLPAKLDKKI 676
           +++FGA YAWM+CVFTV++ YSITCPII PFGL+Y+LLKH+VDR+NLY+ YLPAKL+K I
Sbjct: 604 QYEFGAMYAWMLCVFTVIVAYSITCPIIAPFGLIYILLKHMVDRHNLYFVYLPAKLEKGI 663

Query: 677 HSGAVNQVVAAPILCLFWLLFFSTMRTGFLAPTSMFTFVVLVITIVICLCHVCFGHFKYL 736
           H  AVNQ +AAPILCLFWL FFS +R G  AP ++FTF+VL++TI++CL H CFG FK+L
Sbjct: 664 HFAAVNQALAAPILCLFWLYFFSFLRLGMKAPATLFTFLVLLLTILVCLAHTCFGCFKHL 723

Query: 737 SAHNYKIEHTETDT-VDPRSNGRPPTAAAVPK 767
           S  NYK E   +D   +  ++  PP    VP+
Sbjct: 724 SPLNYKTEEPASDKGSEAEAHMPPPFTPYVPR 755


>gi|190341095 transmembrane protein 63C [Homo sapiens]
          Length = 806

 Score =  677 bits (1747), Expect = 0.0
 Identities = 342/764 (44%), Positives = 498/764 (65%), Gaps = 32/764 (4%)

Query: 21  DYCYSARIRSTVLQGLPFGGVPTVLALDFMCFLALLFLFSILRKVAWDYGRLALVTDADR 80
           D C+ +R  +TVLQG PFGGVPTVL L+   ++ +L ++S LRK AWDYGRLAL+   D 
Sbjct: 20  DECFQSR--NTVLQGQPFGGVPTVLCLNIALWVLVLVVYSFLRKAAWDYGRLALLIHNDS 77

Query: 81  LRRQERDRVEQEYVASAMHGDSHDRYERLTSVSSSVDFDQRDNGFCSWLTAIFRIKDDEI 140
           L              S ++G+     E+ +   +S++ ++RD GFCSW      +KD+++
Sbjct: 78  L-------------TSLIYGEQS---EKTSPSETSLEMERRDKGFCSWFFNSITMKDEDL 121

Query: 141 RDKCGGDAVHYLSFQRHIIGLLVVVGVLSVGIVLPVNFSGDLLENNAYSFGRTTIANLKS 200
            +KCG DA  Y+ FQ H+I  ++++ + S+GI+LP+N++G +L+ +++ F RTTI N+ +
Sbjct: 122 INKCGDDARIYIVFQYHLIIFVLIICIPSLGIILPINYTGSVLDWSSH-FARTTIVNVST 180

Query: 201 GNNLLWLHTSFAFLYLLLTVYSMRRHTSKMRYKEDDLVKRTLFINGISKYAES-EKIKKH 259
            + LLWLH+  +F Y +     M  H      +    V RTL I  + K  E  E I KH
Sbjct: 181 ESKLLWLHSLLSFFYFITNFMFMAHHCLGFAPRNSQKVTRTLMITYVPKDIEDPELIIKH 240

Query: 260 FEEAYPNCTVLEARPCYNVARLMFLDAERKKAERGKLYFTNLQSKENVPTMINPKPCGHL 319
           F EAYP   V     CY+V  L+ LD +R+ A RG+L++T  ++K+    MI   PC  L
Sbjct: 241 FHEAYPGSVVTRVHFCYDVRNLIDLDDQRRHAMRGRLFYT-AKAKKTGKVMIRIHPCARL 299

Query: 320 CCCVVRGC-EQVEAIEYYTKLEQKLKEDYKREKEKVNEKPLGMAFVTFHNETITAIILKD 378
           C C    C ++V+A +YY++LE++L +++  E  +V  K L + FVTF +  +   + KD
Sbjct: 300 CFCKCWTCFKEVDAEQYYSELEEQLTDEFNAELNRVPLKRLDLIFVTFQDSRMAKRVRKD 359

Query: 379 FNVCKCQGCTCRGEPRPSSCSESLHISNWTVSYAPDPQNIYWEHLSIRGFIWWLRCLVIN 438
           +   +C       +P+ SS +  +    W V+ AP P++I W+HLS+R F WW R + IN
Sbjct: 360 YKYVQCGV-----QPQQSSVTTIVKSYYWRVTMAPHPKDIIWKHLSVRRFFWWARFIAIN 414

Query: 439 VVLFILLFFLTTPAIIITTMDKFNVTKPVEYLNNPIITQFFPTLLLWCFSALLPTIVYYS 498
             LF L FFLTTPAII+ T+D +NVT+P+E L NPI+TQFFP+++LW F+ +LP IVY+S
Sbjct: 415 TFLFFLFFFLTTPAIIMNTIDMYNVTRPIEKLQNPIVTQFFPSVMLWGFTVILPLIVYFS 474

Query: 499 AFFEAHWTRSGENRTTMHKCYTFLIFMVLLLPSLGLSSLDLFFRWLFDKKFLAEAAIRFE 558
           AF EAHWTRS +N   +HKCY FL+FMV++LPS+GL+SLD+F RWLFD  +L +A+IRF+
Sbjct: 475 AFLEAHWTRSSQNLVMVHKCYIFLVFMVVILPSMGLTSLDVFLRWLFDIYYLEQASIRFQ 534

Query: 559 CVFLPDNGAFFVNYVIASAFIGNAMDLLRIPGLLMYMIRLCLARSAAERRNVKRHQAYEF 618
           CVFLPDNGAFFVNYVI +A +G  M+LLR+  L  Y  RL  +RS  ER N++++QA +F
Sbjct: 535 CVFLPDNGAFFVNYVITAALLGTGMELLRLGSLFCYSTRLFFSRSEPERVNIRKNQAIDF 594

Query: 619 QFGAAYAWMMCVFTVVMTYSITCPIIVPFGLMYMLLKHLVDRYNLYYAYLPAKLDKKIHS 678
           QFG  YAWMM VF+VVM YSITCPIIVPFGL+Y+ +KHL DRYN+YY++ P KL+++IH 
Sbjct: 595 QFGREYAWMMNVFSVVMAYSITCPIIVPFGLLYLCMKHLTDRYNMYYSFAPTKLNEQIHM 654

Query: 679 GAVNQVVAAPILCLFWLLFFSTMRTGFLAPTSMFTFVVLVITIVICLCHVCFGHFKYLSA 738
            AV+Q + AP+L LFW+LFFS +R G L   ++F+   L+I +VI    +  G  + ++ 
Sbjct: 655 AAVSQAIFAPLLGLFWMLFFSILRLGSLHAITIFSLSTLLIAMVIAFVGIFLGKLRMVA- 713

Query: 739 HNYKIEHTETDTVDPRSNGRPPTAAAVPKSAKYIAQVLQDSEVD 782
            +Y+ E  E  TV    +  P + ++ P S  Y+A VLQ+ E++
Sbjct: 714 -DYEPEEEEIQTV---FDMEPSSTSSTPTSLLYVATVLQEPELN 753


>gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]
          Length = 1352

 Score = 33.5 bits (75), Expect = 0.83
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 759 PPTAAAVPKSAKYIAQVLQDSEVDGDGDGAPGSSGDEPPSSSS 801
           PP AA+  +   +  ++ +     G G G PG+SG   PSS S
Sbjct: 11  PPAAASGKEKRSFSKRLFRSGRAGGGGAGGPGASGPAAPSSPS 53


>gi|195927030 Cas-Br-M (murine) ecotropic retroviral transforming
           sequence c isoform 2 [Homo sapiens]
          Length = 428

 Score = 33.5 bits (75), Expect = 0.83
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 743 IEHTETDTVDPRSNGRPPTAA-AVPKSAKYIAQVLQDSEV-DGDGDGAPGSSGD 794
           ++  E   VDPR +  PP+    +P++A+ + +V        G G G PG SGD
Sbjct: 25  LQRLEEQCVDPRLSVSPPSLRDLLPRTAQLLREVAHSRRAAGGGGPGGPGGSGD 78


>gi|195927027 Cas-Br-M (murine) ecotropic retroviral transforming
           sequence c isoform 1 [Homo sapiens]
          Length = 474

 Score = 33.5 bits (75), Expect = 0.83
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 743 IEHTETDTVDPRSNGRPPTAA-AVPKSAKYIAQVLQDSEV-DGDGDGAPGSSGD 794
           ++  E   VDPR +  PP+    +P++A+ + +V        G G G PG SGD
Sbjct: 25  LQRLEEQCVDPRLSVSPPSLRDLLPRTAQLLREVAHSRRAAGGGGPGGPGGSGD 78


>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
          Length = 1960

 Score = 32.0 bits (71), Expect = 2.4
 Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)

Query: 73   ALVTDAD-RLRRQERDRVEQEYVASAMHGDSHDRYERLTSVSSSV 116
            A++TD + RLRR+E+ R E E     + GDS D  +++  + + +
Sbjct: 1027 AMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQI 1071


>gi|6912276 cysteine-rich hydrophobic domain 2 [Homo sapiens]
          Length = 165

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 14/54 (25%), Positives = 25/54 (46%)

Query: 304 KENVPTMINPKPCGHLCCCVVRGCEQVEAIEYYTKLEQKLKEDYKREKEKVNEK 357
           K+N+P  +    CG LCCC   GC     I    +  + +++  + E  ++  K
Sbjct: 76  KKNLPVNVRWLLCGCLCCCCTLGCSMWPVICLSKRTRRSIEKLLEWENNRLYHK 129


>gi|210147567 hypothetical protein LOC220081 [Homo sapiens]
          Length = 696

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)

Query: 755 SNGRPPTAAAVPK-SAKYIAQVLQDSEVDGDGDGAPGSSGDEPPSSSSQDEELLMPPDAL 813
           S   PP     P+ S + +    +D+EV+ D +     S   P   S +D+E L   + L
Sbjct: 9   SGASPPHPPTTPQYSTQNLPSEKEDTEVELDEESLQDESPFSPEGESLEDKEYLEEEEDL 68

Query: 814 TDTDFQSCEDSLIENE 829
            + ++   E+ L E E
Sbjct: 69  EEEEYLGKEEYLKEEE 84


>gi|5453844 TAF6-like RNA polymerase II [Homo sapiens]
          Length = 622

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 17/49 (34%), Positives = 24/49 (48%)

Query: 753 PRSNGRPPTAAAVPKSAKYIAQVLQDSEVDGDGDGAPGSSGDEPPSSSS 801
           PR  G     AA P S + + Q+   + V   GD +P  SG   P+S+S
Sbjct: 466 PRPPGDKKEPAAAPDSVRKMPQLTASAIVSPHGDESPRGSGGGGPASAS 514


>gi|134254443 pecanex-like 2 [Homo sapiens]
          Length = 2137

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 782  DGDGDGAPGSSGDEPPSSSSQDEELLMPPDALTDTDFQSCE 822
            D DG GAP + G+  PS  SQ+     P          SCE
Sbjct: 1885 DVDGGGAPTTGGNNAPSGGSQESSAEQPRKGGAQHGVSSCE 1925


>gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]
          Length = 1397

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 9/80 (11%)

Query: 742  KIEHTETDTVDPRSNGRPPTAAAVPKSAKY--------IAQVLQDSEVDGDGDGAPGSSG 793
            ++ H ETDT      G        P  + +          + L     DG+G G  G   
Sbjct: 1187 ELSHVETDTEGAAGAGPGGRLTRRPSFSSHHLMPCDTLARRRLARGRPDGEGAGRGGPRA 1246

Query: 794  DEPPSSS-SQDEELLMPPDA 812
             EPP S+ S  +E L PP A
Sbjct: 1247 PEPPGSASSSSQESLRPPAA 1266


>gi|110835710 sodium channel, voltage-gated, type X, alpha [Homo
           sapiens]
          Length = 1956

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 23/132 (17%)

Query: 475 ITQFFPTLLLWCFSALLPTIVYYSAFFEAHWTRSGENRTTMHKCYTFLIFMVLLLPSLGL 534
           I++F  T  LW FS               +  R    + ++H  ++  I + +L+  + +
Sbjct: 101 ISRFSATRALWLFSPF-------------NLIRRTAIKVSVHSWFSLFITVTILVNCVCM 147

Query: 535 SSLDL--FFRWLFDKKFLAEAAIRF--------ECVFLPDNGAFFVNYVIASAFIGNAMD 584
           +  DL     ++F   +  EA I+         E  +L D   +    VI  A++G A+D
Sbjct: 148 TRTDLPEKIEYVFTVIYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGTAID 207

Query: 585 LLRIPGLLMYMI 596
           L  I GL  + +
Sbjct: 208 LRGISGLRTFRV 219


>gi|194097382 ADP-ribosyltransferase 3 isoform c [Homo sapiens]
          Length = 367

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 1/91 (1%)

Query: 328 EQVEAIEYYTKLEQKLKEDYKREKEKVNEKPLGMAFVTFHNETITAIILKDFN-VCKCQG 386
           +Q+  +  YT L   ++    +E E++   PL   F          +IL+  N  C    
Sbjct: 196 DQLTVLSIYTCLGVDIENFLDKESERITLIPLNEVFQVSQEGAGNNLILQSINKTCSHYE 255

Query: 387 CTCRGEPRPSSCSESLHISNWTVSYAPDPQN 417
           C   G  +  +C E+L        Y P  +N
Sbjct: 256 CAFLGGLKTENCIENLEYFQPIYVYNPGEKN 286


>gi|194097380 ADP-ribosyltransferase 3 isoform a [Homo sapiens]
          Length = 389

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 1/91 (1%)

Query: 328 EQVEAIEYYTKLEQKLKEDYKREKEKVNEKPLGMAFVTFHNETITAIILKDFN-VCKCQG 386
           +Q+  +  YT L   ++    +E E++   PL   F          +IL+  N  C    
Sbjct: 196 DQLTVLSIYTCLGVDIENFLDKESERITLIPLNEVFQVSQEGAGNNLILQSINKTCSHYE 255

Query: 387 CTCRGEPRPSSCSESLHISNWTVSYAPDPQN 417
           C   G  +  +C E+L        Y P  +N
Sbjct: 256 CAFLGGLKTENCIENLEYFQPIYVYNPGEKN 286


>gi|21361167 ADP-ribosyltransferase 3 isoform b [Homo sapiens]
          Length = 378

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 1/91 (1%)

Query: 328 EQVEAIEYYTKLEQKLKEDYKREKEKVNEKPLGMAFVTFHNETITAIILKDFN-VCKCQG 386
           +Q+  +  YT L   ++    +E E++   PL   F          +IL+  N  C    
Sbjct: 196 DQLTVLSIYTCLGVDIENFLDKESERITLIPLNEVFQVSQEGAGNNLILQSINKTCSHYE 255

Query: 387 CTCRGEPRPSSCSESLHISNWTVSYAPDPQN 417
           C   G  +  +C E+L        Y P  +N
Sbjct: 256 CAFLGGLKTENCIENLEYFQPIYVYNPGEKN 286


>gi|157743245 WD repeat domain 43 [Homo sapiens]
          Length = 677

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 611 KRHQAYEFQFGAAYAWMMCVFTVVMTYSITCPIIVP-FGLMYMLLKHLVDRY 661
           KR Q +         W+ CV TV  +Y  T P +VP  G +Y L++  V  +
Sbjct: 511 KRLQGHPNSAVLMVQWLKCVLTVHASYLSTLPDLVPQLGTLYQLMESRVKTF 562


>gi|4505085 melanoma antigen family B, 4 [Homo sapiens]
          Length = 346

 Score = 30.0 bits (66), Expect = 9.2
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 16/81 (19%)

Query: 760 PTAAAVPKSAKYIAQVLQDSEVDGDGDGAPGSSGDEPPSSS---------------SQDE 804
           PTAA   +S    + VL+D+       G P     EPP++S               SQDE
Sbjct: 30  PTAAEKEESPSSSSSVLRDTASSSLAFGIPQEPQREPPTTSAAAAMSCTGSDKGDESQDE 89

Query: 805 ELLMPPDALTDTDFQSCEDSL 825
           E      A T T+ +S +DSL
Sbjct: 90  ENASSSQASTSTE-RSLKDSL 109


>gi|18426904 Werner helicase interacting protein isoform 2 [Homo
           sapiens]
          Length = 640

 Score = 30.0 bits (66), Expect = 9.2
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 6/56 (10%)

Query: 754 RSNGRPPTAAAVPKSA------KYIAQVLQDSEVDGDGDGAPGSSGDEPPSSSSQD 803
           + +G+ P AAA   SA      +  AQ  +++  DGDGDG   + G++ P     D
Sbjct: 137 KGSGKRPAAAAAAGSASPRSWDEAEAQEEEEAVGDGDGDGDADADGEDDPGHWDAD 192


>gi|18426902 Werner helicase interacting protein isoform 1 [Homo
           sapiens]
          Length = 665

 Score = 30.0 bits (66), Expect = 9.2
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 6/56 (10%)

Query: 754 RSNGRPPTAAAVPKSA------KYIAQVLQDSEVDGDGDGAPGSSGDEPPSSSSQD 803
           + +G+ P AAA   SA      +  AQ  +++  DGDGDG   + G++ P     D
Sbjct: 137 KGSGKRPAAAAAAGSASPRSWDEAEAQEEEEAVGDGDGDGDADADGEDDPGHWDAD 192


>gi|170932512 FERM domain containing 1 isoform 2 [Homo sapiens]
          Length = 481

 Score = 30.0 bits (66), Expect = 9.2
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 11/84 (13%)

Query: 322 CVVRGCEQVEAIEYYTKLEQKLKE----DYKREKEKVNEKPLG--MAFVTFHNETITAII 375
           CVVR  E +     +  LEQKL +    D+K+E+ + NEKP    +AF+   +      +
Sbjct: 30  CVVRNNEYI-----FMDLEQKLSKYFSKDWKKERNEGNEKPRAPFVAFLRVQHYVENGRV 84

Query: 376 LKDFNVCKCQGCTCRGEPRPSSCS 399
           + D        C  +     S C+
Sbjct: 85  ISDHRARHLYYCHLKERVLRSQCA 108


>gi|170932510 FERM domain containing 1 isoform 1 [Homo sapiens]
          Length = 549

 Score = 30.0 bits (66), Expect = 9.2
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 11/84 (13%)

Query: 322 CVVRGCEQVEAIEYYTKLEQKLKE----DYKREKEKVNEKPLG--MAFVTFHNETITAII 375
           CVVR  E +     +  LEQKL +    D+K+E+ + NEKP    +AF+   +      +
Sbjct: 98  CVVRNNEYI-----FMDLEQKLSKYFSKDWKKERNEGNEKPRAPFVAFLRVQHYVENGRV 152

Query: 376 LKDFNVCKCQGCTCRGEPRPSSCS 399
           + D        C  +     S C+
Sbjct: 153 ISDHRARHLYYCHLKERVLRSQCA 176


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.140    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,764,259
Number of Sequences: 37866
Number of extensions: 1445899
Number of successful extensions: 6078
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 6042
Number of HSP's gapped (non-prelim): 37
length of query: 832
length of database: 18,247,518
effective HSP length: 111
effective length of query: 721
effective length of database: 14,044,392
effective search space: 10126006632
effective search space used: 10126006632
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.