Search of human proteins with 5453828

Search of human proteins with 5453828

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5453828 olfactory marker protein [Homo sapiens]
         (163 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5453828 olfactory marker protein [Homo sapiens]                    328   1e-90
gi|221139761 zinc finger protein 853 [Homo sapiens]                    31   0.54 
gi|239754976 PREDICTED: IQ motif and ankyrin repeat domain-conta...    30   1.2  
gi|39725952 angiogenic factor VG5Q [Homo sapiens]                      30   1.2  
gi|74027270 beta-carotene 15,15'-monooxygenase [Homo sapiens]          29   1.6  
gi|190358536 SWI/SNF-related, matrix-associated actin-dependent ...    29   1.6  
gi|190358534 SWI/SNF-related, matrix-associated actin-dependent ...    29   1.6  
gi|190358532 SWI/SNF-related, matrix-associated actin-dependent ...    29   1.6  
gi|239743649 PREDICTED: IQ motif and ankyrin repeat domain-conta...    28   3.5  
gi|145386517 phostensin [Homo sapiens]                                 28   4.6  
gi|199559805 phostensin [Homo sapiens]                                 28   4.6  
gi|31542634 filamin A interacting protein 1 [Homo sapiens]             28   4.6  
gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens]         27   7.8  
gi|156546890 WW and C2 domain containing 2 [Homo sapiens]              27   7.8  

>gi|5453828 olfactory marker protein [Homo sapiens]
          Length = 163

 Score =  328 bits (842), Expect = 1e-90
 Identities = 163/163 (100%), Positives = 163/163 (100%)

Query: 1   MAEDRPQQPQLDMPLVLDQGLTRQMRLRVESLKQRGEKRQDGEKLLQPAESVYRLNFTQQ 60
           MAEDRPQQPQLDMPLVLDQGLTRQMRLRVESLKQRGEKRQDGEKLLQPAESVYRLNFTQQ
Sbjct: 1   MAEDRPQQPQLDMPLVLDQGLTRQMRLRVESLKQRGEKRQDGEKLLQPAESVYRLNFTQQ 60

Query: 61  QRLQFERWNVVLDKPGKVTITGTSQNWTPDLTNLMTRQLLDPTAIFWRKEDSDAIDWNEA 120
           QRLQFERWNVVLDKPGKVTITGTSQNWTPDLTNLMTRQLLDPTAIFWRKEDSDAIDWNEA
Sbjct: 61  QRLQFERWNVVLDKPGKVTITGTSQNWTPDLTNLMTRQLLDPTAIFWRKEDSDAIDWNEA 120

Query: 121 DALEFGERLSDLAKIRKVMYFLVTFGEGVEPANLKASVVFNQL 163
           DALEFGERLSDLAKIRKVMYFLVTFGEGVEPANLKASVVFNQL
Sbjct: 121 DALEFGERLSDLAKIRKVMYFLVTFGEGVEPANLKASVVFNQL 163


>gi|221139761 zinc finger protein 853 [Homo sapiens]
          Length = 659

 Score = 30.8 bits (68), Expect = 0.54
 Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 3   EDRPQQPQLDMPLVLDQGLTRQMRLRVESLKQRGEKRQDGEKLLQPAESVYRLNFTQQQ- 61
           +++ Q  Q     VL Q    Q +++ + L Q+ +++   ++LLQ  E + +  F QQQ 
Sbjct: 174 QEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQQQQLLQQQEQLQQQQFQQQQE 233

Query: 62  RLQFERWNVVLDKPGKV 78
           +LQ ++  ++L + G++
Sbjct: 234 QLQQQQQLLLLQQQGQL 250


>gi|239754976 PREDICTED: IQ motif and ankyrin repeat
          domain-containing protein LOC642574 [Homo sapiens]
          Length = 484

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 17/54 (31%), Positives = 30/54 (55%)

Query: 2  AEDRPQQPQLDMPLVLDQGLTRQMRLRVESLKQRGEKRQDGEKLLQPAESVYRL 55
          ++D  ++P  D      QG  RQ+R R E  ++R E+R+  E++  P + V +L
Sbjct: 35 SQDPRRRPAEDRAARAIQGAFRQLRARRELARRREERREYLEQMETPQKEVEQL 88


>gi|39725952 angiogenic factor VG5Q [Homo sapiens]
          Length = 714

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)

Query: 1  MAEDRPQQPQLDMPLVLDQGLTRQMRLRVESLKQ--RGEKRQ--DGEKLLQPAESVYR-- 54
          MA + P  P+   P    +    Q+R +VE L++  R  KRQ  + EKLL   E +Y+  
Sbjct: 1  MASEAPSPPRSPPPPTSPEPELAQLRRKVEKLERELRSCKRQVREIEKLLHHTERLYQNA 60

Query: 55 LNFTQQQRLQFERWNVVLDK 74
           +  Q+ R Q E  + +L +
Sbjct: 61 ESNNQELRTQVEELSKILQR 80


>gi|74027270 beta-carotene 15,15'-monooxygenase [Homo sapiens]
          Length = 547

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 27  LRVESLKQRGEKRQDGEKLLQPAESVYRLNFTQQQRLQFERWNVVLDKPGKVTITGTSQN 86
           ++V S      K +DG+   QP E +Y       + L+  R N   +      +  T   
Sbjct: 376 IKVASTTATALKEEDGQVYCQP-EFLY-------EGLELPRVNYAHNGKQYRYVFATGVQ 427

Query: 87  WTPDLTNLMTRQLLDPTAIFWRKED 111
           W+P  T ++   +L  +++ WR++D
Sbjct: 428 WSPIPTKIIKYDILTKSSLKWREDD 452


>gi|190358536 SWI/SNF-related, matrix-associated actin-dependent
           regulator of chromatin, subfamily a, containing DEAD/H
           box 1 isoform a [Homo sapiens]
          Length = 1028

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 10  QLDMPLVLDQGLTRQMRLRVESLKQRGEK 38
           QLDM L+LD G  R +   +  LKQ+G++
Sbjct: 846 QLDMDLILDSGKFRVLGCILSELKQKGDR 874


>gi|190358534 SWI/SNF-related, matrix-associated actin-dependent
           regulator of chromatin, subfamily a, containing DEAD/H
           box 1 isoform b [Homo sapiens]
          Length = 1026

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 10  QLDMPLVLDQGLTRQMRLRVESLKQRGEK 38
           QLDM L+LD G  R +   +  LKQ+G++
Sbjct: 844 QLDMDLILDSGKFRVLGCILSELKQKGDR 872


>gi|190358532 SWI/SNF-related, matrix-associated actin-dependent
           regulator of chromatin, subfamily a, containing DEAD/H
           box 1 isoform a [Homo sapiens]
          Length = 1028

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 10  QLDMPLVLDQGLTRQMRLRVESLKQRGEK 38
           QLDM L+LD G  R +   +  LKQ+G++
Sbjct: 846 QLDMDLILDSGKFRVLGCILSELKQKGDR 874


>gi|239743649 PREDICTED: IQ motif and ankyrin repeat
           domain-containing protein LOC642574 [Homo sapiens]
          Length = 580

 Score = 28.1 bits (61), Expect = 3.5
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 3   EDRPQQPQLDMPLVLDQGLTRQMRLRVESLKQRGEKRQDGEKLLQPAESVYRLNFTQQQ 61
           E RP + +    +   QG  RQ+R R E  ++R E+R+  E++  P +  Y     ++Q
Sbjct: 80  ESRPAEDRAARAI---QGAFRQLRARRELARRREERREYLEQMETPQKEAYLAPVRREQ 135


>gi|145386517 phostensin [Homo sapiens]
          Length = 613

 Score = 27.7 bits (60), Expect = 4.6
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 24/104 (23%)

Query: 17  LDQGLTRQMRLRVESLKQRGEKRQDGEKLLQPAESVYRLNFTQQQRLQFERWNVVLDKPG 76
           L  G T +  LR+   +++  +R++ E  L P ES Y+                      
Sbjct: 194 LSPGETPERSLRLAESREQSPRRKEVESRLSPGESAYQ---------------------- 231

Query: 77  KVTITGTSQNWTPDLTNLMTRQLLDPTAIFWR-KEDSDAIDWNE 119
           K+ +T  +  W PD      + L+   A  WR +   +  D++E
Sbjct: 232 KLGLT-EAHKWRPDSRESQEQSLVQLEATEWRLRSGEERQDYSE 274


>gi|199559805 phostensin [Homo sapiens]
          Length = 613

 Score = 27.7 bits (60), Expect = 4.6
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 24/104 (23%)

Query: 17  LDQGLTRQMRLRVESLKQRGEKRQDGEKLLQPAESVYRLNFTQQQRLQFERWNVVLDKPG 76
           L  G T +  LR+   +++  +R++ E  L P ES Y+                      
Sbjct: 194 LSPGETPERSLRLAESREQSPRRKEVESRLSPGESAYQ---------------------- 231

Query: 77  KVTITGTSQNWTPDLTNLMTRQLLDPTAIFWR-KEDSDAIDWNE 119
           K+ +T  +  W PD      + L+   A  WR +   +  D++E
Sbjct: 232 KLGLT-EAHKWRPDSRESQEQSLVQLEATEWRLRSGEERQDYSE 274


>gi|31542634 filamin A interacting protein 1 [Homo sapiens]
          Length = 1213

 Score = 27.7 bits (60), Expect = 4.6
 Identities = 14/44 (31%), Positives = 25/44 (56%)

Query: 7   QQPQLDMPLVLDQGLTRQMRLRVESLKQRGEKRQDGEKLLQPAE 50
           +  +++  L   +   RQ+RL++  L QR E+ ++  K LQ AE
Sbjct: 313 EHEEMNAKLANQESHNRQLRLKLVGLTQRIEELEETNKNLQKAE 356


>gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens]
          Length = 931

 Score = 26.9 bits (58), Expect = 7.8
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 33  KQRGEKRQDGE--KLLQPAESVYRLNFTQQQRLQFERWNVVLDKPGKVTITGTSQNWTPD 90
           + RG    D    K+LQ  +   +L    QQ+ Q   +  +L  P K        + TP 
Sbjct: 248 QDRGAPPMDSSYAKILQQQQLFLQLQILNQQQQQHHNYQAILPAPPKSAGEALGSSGTPP 307

Query: 91  LTNLMT 96
           + +L T
Sbjct: 308 VRSLST 313


>gi|156546890 WW and C2 domain containing 2 [Homo sapiens]
          Length = 1192

 Score = 26.9 bits (58), Expect = 7.8
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 3    EDRPQQPQLDMPLVLDQGLTRQMRLRVESLKQRGEKRQDGEKLLQPAESVYRLNFTQQQR 62
            ++ P +  LD+ L L   LTRQ RL  + L+   + RQ  E+L    E+       + +R
Sbjct: 1059 QECPVRTSLDLELDLQASLTRQSRLN-DELQALRDLRQKLEELKAQGETDLPPGVLEDER 1117

Query: 63   LQ 64
             Q
Sbjct: 1118 FQ 1119


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,948,007
Number of Sequences: 37866
Number of extensions: 236026
Number of successful extensions: 609
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 598
Number of HSP's gapped (non-prelim): 15
length of query: 163
length of database: 18,247,518
effective HSP length: 94
effective length of query: 69
effective length of database: 14,688,114
effective search space: 1013479866
effective search space used: 1013479866
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.