Guide to the Human Genome
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Name: RTP2 Sequence: fasta or formatted (225aa) NCBI GI: 51972198
Description:

receptor transporting protein 2

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         16           1
 C cysteine            4.9         11           1
 D aspartate           3.1          7           1
 E glutamate           9.8         22           3
 F phenylalanine       5.3         12           2
 G glycine             4.9         11           2
 H histidine           3.6          8           1
 I isoleucine          3.1          7           2
 K lysine              4.4         10           2
 L leucine            10.2         23           2
 M methionine          2.2          5           1
 N asparagine          1.8          4           1
 P proline             4.0          9           1
 Q glutamine           4.0          9           1
 R arginine            5.8         13           2
 S serine              8.9         20           2
 T threonine           4.0          9           2
 V valine              5.3         12           2
 W tryptophan          4.0          9           1
 Y tyrosine            3.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   receptor transporting protein 2 
RTP1                  0.792   receptor transporting protein 1 
RTP3                  0.189   transmembrane protein 7 
RTP4                  0.154   28kD interferon responsive protein 
C2orf85               0.110   hypothetical protein LOC285093 
ZAR1L                 0.018   zygote arrest 1-like 
ZNF217                0.015   zinc finger protein 217 
LAMC3                 0.013   laminin, gamma 3 precursor 
ADNP                  0.011   activity-dependent neuroprotector 
ADNP                  0.011   activity-dependent neuroprotector 
ZNF34                 0.011   zinc finger protein 34 
NSFL1C                0.009   p47 protein isoform a 
DMWD                  0.009   dystrophia myotonica-containing WD repeat motif prot...
RAD50                 0.007   RAD50 homolog isoform 2 
RAD50                 0.007   RAD50 homolog isoform 1 
ACTRT1                0.007   actin-related protein T1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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