| Name: NUP85 | Sequence: fasta or formatted (656aa) | NCBI GI: 13376259 | |
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Description: nucleoporin 85
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.4 42 2 C cysteine 2.3 15 1 D aspartate 5.6 37 3 E glutamate 8.1 53 2 F phenylalanine 4.0 26 1 G glycine 4.4 29 2 H histidine 2.7 18 1 I isoleucine 5.3 35 2 K lysine 4.3 28 2 L leucine 14.9 98 3 M methionine 3.4 22 2 N asparagine 3.2 21 2 P proline 3.7 24 1 Q glutamine 4.0 26 1 R arginine 6.1 40 2 S serine 8.5 56 2 T threonine 4.0 26 2 V valine 4.7 31 1 W tryptophan 1.8 12 2 Y tyrosine 2.6 17 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 nucleoporin 85 ERCC6 0.007 excision repair cross-complementing rodent repair def... VARS2 0.006 valyl-tRNA synthetase 2, mitochondrial GOPC 0.005 golgi associated PDZ and coiled-coil motif containing... OAS2 0.005 2'-5'-oligoadenylate synthetase 2 isoform 2 OAS2 0.005 2'-5'-oligoadenylate synthetase 2 isoform 1 NLRP7 0.005 NACHT, leucine rich repeat and PYD containing 7 iso... NLRP7 0.005 NACHT, leucine rich repeat and PYD containing 7 isof... GOPC 0.005 golgi associated PDZ and coiled-coil motif containin... SAMD4B 0.004 sterile alpha motif domain containing 4BHuman BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
