Guide to the Human Genome
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Search of human proteins with 50658087

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|50658087 abhydrolase domain containing 4 [Homo sapiens]
         (342 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|50658087 abhydrolase domain containing 4 [Homo sapiens]            711   0.0  
gi|31542303 abhydrolase domain containing 5 [Homo sapiens]            401   e-112
gi|218777837 abhydrolase domain containing 7 [Homo sapiens]            46   4e-05
gi|27597073 epoxide hydrolase 2, cytoplasmic [Homo sapiens]            45   7e-05
gi|218777840 abhydrolase domain containing 9 [Homo sapiens]            40   0.003
gi|13376164 abhydrolase domain containing 9 [Homo sapiens]             40   0.003
gi|145611434 abhydrolase domain containing 8 [Homo sapiens]            37   0.026
gi|51242953 monoglyceride lipase isoform 2 [Homo sapiens]              36   0.044
gi|6005786 monoglyceride lipase isoform 1 [Homo sapiens]               36   0.044
gi|189027141 abhydrolase domain containing 6 [Homo sapiens]            35   0.097
gi|23200008 abhydrolase domain containing 11 isoform 1 [Homo sap...    34   0.17 
gi|23200012 abhydrolase domain containing 11 isoform 2 [Homo sap...    34   0.17 
gi|48475052 secreted frizzled-related protein 2 precursor [Homo ...    33   0.48 
gi|106507261 pancreatic lipase-related protein 2 [Homo sapiens]        32   0.63 
gi|237858675 neurofascin isoform 1 precursor [Homo sapiens]            32   1.1  
gi|28629871 hypothetical protein LOC140701 [Homo sapiens]              31   1.4  
gi|21536371 telomerase-associated protein 1 [Homo sapiens]             30   4.1  
gi|15100151 HLA-B associated transcript 5 [Homo sapiens]               30   4.1  
gi|153218487 KDEL (Lys-Asp-Glu-Leu) containing 2 [Homo sapiens]        30   4.1  
gi|18777795 serine hydrolase-like 2 [Homo sapiens]                     29   5.3  
gi|169167405 PREDICTED: hypothetical protein [Homo sapiens]            29   5.3  
gi|42560223 recombining binding protein suppressor of hairless i...    29   7.0  
gi|42560225 recombining binding protein suppressor of hairless i...    29   7.0  
gi|42560229 recombining binding protein suppressor of hairless i...    29   7.0  
gi|42560227 recombining binding protein suppressor of hairless i...    29   7.0  

>gi|50658087 abhydrolase domain containing 4 [Homo sapiens]
          Length = 342

 Score =  711 bits (1834), Expect = 0.0
 Identities = 342/342 (100%), Positives = 342/342 (100%)

Query: 1   MADDLEQQSQGWLSSWLPTWRPTSMSQLKNVEARILQCLQNKFLARYVSLPNQNKIWTVT 60
           MADDLEQQSQGWLSSWLPTWRPTSMSQLKNVEARILQCLQNKFLARYVSLPNQNKIWTVT
Sbjct: 1   MADDLEQQSQGWLSSWLPTWRPTSMSQLKNVEARILQCLQNKFLARYVSLPNQNKIWTVT 60

Query: 61  VSPEQNDRTPLVMVHGFGGGVGLWILNMDSLSARRTLHTFDLLGFGRSSRPAFPRDPEGA 120
           VSPEQNDRTPLVMVHGFGGGVGLWILNMDSLSARRTLHTFDLLGFGRSSRPAFPRDPEGA
Sbjct: 61  VSPEQNDRTPLVMVHGFGGGVGLWILNMDSLSARRTLHTFDLLGFGRSSRPAFPRDPEGA 120

Query: 121 EDEFVTSIETWRETMGIPSMILLGHSLGGFLATSYSIKYPDRVKHLILVDPWGFPLRPTN 180
           EDEFVTSIETWRETMGIPSMILLGHSLGGFLATSYSIKYPDRVKHLILVDPWGFPLRPTN
Sbjct: 121 EDEFVTSIETWRETMGIPSMILLGHSLGGFLATSYSIKYPDRVKHLILVDPWGFPLRPTN 180

Query: 181 PSEIRAPPAWVKAVASVLGRSNPLAVLRVAGPWGPGLVQRFRPDFKRKFADFFEDDTISE 240
           PSEIRAPPAWVKAVASVLGRSNPLAVLRVAGPWGPGLVQRFRPDFKRKFADFFEDDTISE
Sbjct: 181 PSEIRAPPAWVKAVASVLGRSNPLAVLRVAGPWGPGLVQRFRPDFKRKFADFFEDDTISE 240

Query: 241 YIYHCNAQNPSGETAFKAMMESFGWARRPMLERIHLIRKDVPITMIYGSDTWIDTSTGKK 300
           YIYHCNAQNPSGETAFKAMMESFGWARRPMLERIHLIRKDVPITMIYGSDTWIDTSTGKK
Sbjct: 241 YIYHCNAQNPSGETAFKAMMESFGWARRPMLERIHLIRKDVPITMIYGSDTWIDTSTGKK 300

Query: 301 VKMQRPDSYVRDMEIKGASHHVYADQPHIFNAVVEEICDSVD 342
           VKMQRPDSYVRDMEIKGASHHVYADQPHIFNAVVEEICDSVD
Sbjct: 301 VKMQRPDSYVRDMEIKGASHHVYADQPHIFNAVVEEICDSVD 342


>gi|31542303 abhydrolase domain containing 5 [Homo sapiens]
          Length = 349

 Score =  401 bits (1031), Expect = e-112
 Identities = 185/335 (55%), Positives = 242/335 (72%)

Query: 8   QSQGWLSSWLPTWRPTSMSQLKNVEARILQCLQNKFLARYVSLPNQNKIWTVTVSPEQND 67
           +  GWL+ WLPTW PTS+S LK  E ++L+C+   +    V + N NKIWT+  S   ++
Sbjct: 15  ERSGWLTGWLPTWCPTSISHLKEAEEKMLKCVPCTYKKEPVRISNGNKIWTLKFSHNISN 74

Query: 68  RTPLVMVHGFGGGVGLWILNMDSLSARRTLHTFDLLGFGRSSRPAFPRDPEGAEDEFVTS 127
           +TPLV++HGFGGG+GLW LN   L   R ++ FDLLGFGRSSRP F  D E  E++FV S
Sbjct: 75  KTPLVLLHGFGGGLGLWALNFGDLCTNRPVYAFDLLGFGRSSRPRFDSDAEEVENQFVES 134

Query: 128 IETWRETMGIPSMILLGHSLGGFLATSYSIKYPDRVKHLILVDPWGFPLRPTNPSEIRAP 187
           IE WR  +G+  MILLGH+LGGFLA +YS+KYP RV HLILV+PWGFP RP    + R  
Sbjct: 135 IEEWRCALGLDKMILLGHNLGGFLAAAYSLKYPSRVNHLILVEPWGFPERPDLADQDRPI 194

Query: 188 PAWVKAVASVLGRSNPLAVLRVAGPWGPGLVQRFRPDFKRKFADFFEDDTISEYIYHCNA 247
           P W++A+ + L   NPLA LR+AGP+G  LVQR RPDFKRK++  FEDDT++EYIYHCN 
Sbjct: 195 PVWIRALGAALTPFNPLAGLRIAGPFGLSLVQRLRPDFKRKYSSMFEDDTVTEYIYHCNV 254

Query: 248 QNPSGETAFKAMMESFGWARRPMLERIHLIRKDVPITMIYGSDTWIDTSTGKKVKMQRPD 307
           Q PSGETAFK M   +GWA+RPML+RI  +  D+P+++I+G+ + ID ++G  ++  RP 
Sbjct: 255 QTPSGETAFKNMTIPYGWAKRPMLQRIGKMHPDIPVSVIFGARSCIDGNSGTSIQSLRPH 314

Query: 308 SYVRDMEIKGASHHVYADQPHIFNAVVEEICDSVD 342
           SYV+ + I GA H+VYADQP  FN  V+EICD+VD
Sbjct: 315 SYVKTIAILGAGHYVYADQPEEFNQKVKEICDTVD 349


>gi|218777837 abhydrolase domain containing 7 [Homo sapiens]
          Length = 362

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 2/110 (1%)

Query: 61  VSPEQNDRTPLVMVHGFGGGVGLWILNMDSLSARRTLHTFDLLGFGRSSRPAFPRDPEGA 120
           V+  +  +  ++++HGF      W   +    +   +   DL G+G +  P   ++ +  
Sbjct: 86  VAAGERGKPLMLLLHGFPEFWYSWRYQLREFKSEYRVVALDLRGYGETDAPIHRQNYK-- 143

Query: 121 EDEFVTSIETWRETMGIPSMILLGHSLGGFLATSYSIKYPDRVKHLILVD 170
            D  +T I+   +++G    +L+GH  GG +A   +I YP+ V  LI+++
Sbjct: 144 LDCLITDIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIVIN 193


>gi|27597073 epoxide hydrolase 2, cytoplasmic [Homo sapiens]
          Length = 555

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 13/132 (9%)

Query: 59  VTVSP-------EQNDRTPLVMVHGFGGGVGLWILNMDSLS-ARRTLHTFDLLGFGRSSR 110
           VTV P       E      + + HGF      W   + +L+ A   +   D+ G+G SS 
Sbjct: 242 VTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSA 301

Query: 111 PAFPRDPEGAEDEFVTSIETWRETMGIPSMILLGHSLGGFLATSYSIKYPDRVKHLILVD 170
           P  P   E   +     + T+ + +G+   + +GH  GG L    ++ YP+RV+ +  ++
Sbjct: 302 P--PEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLN 359

Query: 171 PWGFPLRPTNPS 182
               P  P NP+
Sbjct: 360 T---PFIPANPN 368


>gi|218777840 abhydrolase domain containing 9 [Homo sapiens]
          Length = 360

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 4/110 (3%)

Query: 61  VSPEQNDRTPLVMVHGFGGGVGLWILNMDSLSARRTLHTFDLLGFGRSSRPAFPRDPEGA 120
           VS  + +   ++ +HGF      W   +    +R  +   DL G+G S  P   RD +  
Sbjct: 90  VSAGRGNGPLMLFLHGFPENWFSWRYQLREFQSRFHVVAVDLRGYGPSDAP---RDVDCY 146

Query: 121 E-DEFVTSIETWRETMGIPSMILLGHSLGGFLATSYSIKYPDRVKHLILV 169
             D  +  I+     +G    IL+ H  G  LA  +SI YP  V+ +++V
Sbjct: 147 TIDLLLVDIKDVILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVV 196


>gi|13376164 abhydrolase domain containing 9 [Homo sapiens]
          Length = 360

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 4/110 (3%)

Query: 61  VSPEQNDRTPLVMVHGFGGGVGLWILNMDSLSARRTLHTFDLLGFGRSSRPAFPRDPEGA 120
           VS  + +   ++ +HGF      W   +    +R  +   DL G+G S  P   RD +  
Sbjct: 90  VSAGRGNGPLMLFLHGFPENWFSWRYQLREFQSRFHVVAVDLRGYGPSDAP---RDVDCY 146

Query: 121 E-DEFVTSIETWRETMGIPSMILLGHSLGGFLATSYSIKYPDRVKHLILV 169
             D  +  I+     +G    IL+ H  G  LA  +SI YP  V+ +++V
Sbjct: 147 TIDLLLVDIKDVILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVV 196


>gi|145611434 abhydrolase domain containing 8 [Homo sapiens]
          Length = 439

 Score = 37.0 bits (84), Expect = 0.026
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 9/107 (8%)

Query: 71  LVMVHGFGGGVGLWILNMDS-LSARRTLHTFDLLGFGRSSRPAFPRDPEGAEDEFVTSIE 129
           L  +HG GG + +W   +D  +     +   DL G G SS P        A   F    E
Sbjct: 178 LFFIHGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSAPQV-----AAAYTFYALAE 232

Query: 130 TWR---ETMGIPSMILLGHSLGGFLATSYSIKYPDRVKHLILVDPWG 173
             R   +       +L+GHS G    T  + +YPD V  +I+++  G
Sbjct: 233 DMRAIFKRYAKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMINGGG 279


>gi|51242953 monoglyceride lipase isoform 2 [Homo sapiens]
          Length = 303

 Score = 36.2 bits (82), Expect = 0.044
 Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 34/205 (16%)

Query: 136 GIPSMILLGHSLGGFLATSYSIKYPDRVKHLILVDPWGFPLRPTNPSEIRAPPAWVKAVA 195
           G+P + LLGHS+GG +A   + + P     ++L+     PL   NP    +   +    A
Sbjct: 113 GLP-VFLLGHSMGGAIAILTAAERPGHFAGMVLIS----PLVLANP---ESATTFKVLAA 164

Query: 196 SVLGRSNPLAVLRVAGPWGPGLVQRFRPDFKRKFADFFEDDTISEYIYHCNAQNPSGETA 255
            VL    P   L   GP    ++ R + +      D +  D +      C A        
Sbjct: 165 KVLNLVLPNLSL---GPIDSSVLSRNKTE-----VDIYNSDPLI-----CRA-------- 203

Query: 256 FKAMMESFGWARRPMLERIH--LIRKDVPITMIYGSDTWIDTSTGKKVKMQRPDSYVRDM 313
              +   FG      + R+   L +  VP  ++ GS   +  S G  + M+   S  + +
Sbjct: 204 --GLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTL 261

Query: 314 EI-KGASHHVYADQPHIFNAVVEEI 337
           +I +GA H ++ + P + N+V  EI
Sbjct: 262 KIYEGAYHVLHKELPEVTNSVFHEI 286


>gi|6005786 monoglyceride lipase isoform 1 [Homo sapiens]
          Length = 313

 Score = 36.2 bits (82), Expect = 0.044
 Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 34/205 (16%)

Query: 136 GIPSMILLGHSLGGFLATSYSIKYPDRVKHLILVDPWGFPLRPTNPSEIRAPPAWVKAVA 195
           G+P + LLGHS+GG +A   + + P     ++L+     PL   NP    +   +    A
Sbjct: 123 GLP-VFLLGHSMGGAIAILTAAERPGHFAGMVLIS----PLVLANP---ESATTFKVLAA 174

Query: 196 SVLGRSNPLAVLRVAGPWGPGLVQRFRPDFKRKFADFFEDDTISEYIYHCNAQNPSGETA 255
            VL    P   L   GP    ++ R + +      D +  D +      C A        
Sbjct: 175 KVLNLVLPNLSL---GPIDSSVLSRNKTE-----VDIYNSDPLI-----CRA-------- 213

Query: 256 FKAMMESFGWARRPMLERIH--LIRKDVPITMIYGSDTWIDTSTGKKVKMQRPDSYVRDM 313
              +   FG      + R+   L +  VP  ++ GS   +  S G  + M+   S  + +
Sbjct: 214 --GLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTL 271

Query: 314 EI-KGASHHVYADQPHIFNAVVEEI 337
           +I +GA H ++ + P + N+V  EI
Sbjct: 272 KIYEGAYHVLHKELPEVTNSVFHEI 296


>gi|189027141 abhydrolase domain containing 6 [Homo sapiens]
          Length = 337

 Score = 35.0 bits (79), Expect = 0.097
 Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 5/112 (4%)

Query: 71  LVMVHGFGGGVGLWILNMDSLSARRTLHTFDLLGFGRSSRPAFPRDPEGAEDEFVTSIET 130
           ++M+HGF     +W+  +  L     L   D+ G   ++R +     + + D  V  I  
Sbjct: 74  ILMLHGFSAHKDMWLSVVKFLPKNLHLVCVDMPGHEGTTRSSLD---DLSIDGQVKRIHQ 130

Query: 131 WRETMGIPS--MILLGHSLGGFLATSYSIKYPDRVKHLILVDPWGFPLRPTN 180
           + E + +      L+G S+GG +A  Y+  YP  V  L LV P G      N
Sbjct: 131 FVECLKLNKKPFHLVGTSMGGQVAGVYAAYYPSDVSSLCLVCPAGLQYSTDN 182


>gi|23200008 abhydrolase domain containing 11 isoform 1 [Homo
           sapiens]
          Length = 315

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 92  SARRTLHTFDLLGFGRSSRPAFPRDPEGAEDEFVTSIETWRETMGIPSMILLGHSLGGFL 151
           + RR L T D    G S     P  P+ + +     ++     +G+   +++GHS+GG  
Sbjct: 93  TGRRVL-TVDARNHGDS-----PHSPDMSYEIMSQDLQDLLPQLGLVPCVVVGHSMGGKT 146

Query: 152 ATSYSIKYPDRVKHLILVDPWGFPLRPTNPSEIRAPPAWVKAV 194
           A   +++ P+ V+ LI VD    P+  T  S      A ++A+
Sbjct: 147 AMLLALQRPELVERLIAVDI--SPVESTGVSHFATYVAAMRAI 187


>gi|23200012 abhydrolase domain containing 11 isoform 2 [Homo
           sapiens]
          Length = 308

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 92  SARRTLHTFDLLGFGRSSRPAFPRDPEGAEDEFVTSIETWRETMGIPSMILLGHSLGGFL 151
           + RR L T D    G S     P  P+ + +     ++     +G+   +++GHS+GG  
Sbjct: 86  TGRRVL-TVDARNHGDS-----PHSPDMSYEIMSQDLQDLLPQLGLVPCVVVGHSMGGKT 139

Query: 152 ATSYSIKYPDRVKHLILVDPWGFPLRPTNPSEIRAPPAWVKAV 194
           A   +++ P+ V+ LI VD    P+  T  S      A ++A+
Sbjct: 140 AMLLALQRPELVERLIAVDI--SPVESTGVSHFATYVAAMRAI 180


>gi|48475052 secreted frizzled-related protein 2 precursor [Homo
           sapiens]
          Length = 295

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 196 SVLGRSNPLAVLRVAGPWGPGLVQRFRPDFKRKFADFFED---DTISEYIYHCNAQNPSG 252
           ++LG      VL  AG W P ++++  PD K+     F     D + E I  C++     
Sbjct: 62  NLLGHETMKEVLEQAGAWIPLVMKQCHPDTKKFLCSLFAPVCLDDLDETIQPCHSLCVQV 121

Query: 253 ETAFKAMMESFGWARRPMLE 272
           +     +M +FG+    MLE
Sbjct: 122 KDRCAPVMSAFGFPWPDMLE 141


>gi|106507261 pancreatic lipase-related protein 2 [Homo sapiens]
          Length = 470

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 1/86 (1%)

Query: 119 GAEDEFVTSIETWRETMGIPSMILLGHSLGGFLATSYSIKYPDRVKHLILVDPWGFPLRP 178
           GAE  F+    + +    +  + ++GHSLG   A     +   RV  +  +DP G P   
Sbjct: 145 GAETAFLIQALSTQLGYSLEDVHVIGHSLGAHTAAEAGRRLGGRVGRITGLDPAG-PCFQ 203

Query: 179 TNPSEIRAPPAWVKAVASVLGRSNPL 204
             P E+R  P+    V  +   S+P+
Sbjct: 204 DEPEEVRLDPSDAVFVDVIHTDSSPI 229


>gi|237858675 neurofascin isoform 1 precursor [Homo sapiens]
          Length = 1240

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 37/159 (23%), Positives = 56/159 (35%), Gaps = 32/159 (20%)

Query: 49   SLPNQNKIWTVTVSPEQNDRTPLVMVHGFGGGVGLWILNMDSLSARRT---------LHT 99
            S P++  IW VTV P  +    +   H FG G    +  +DS   ++T         +  
Sbjct: 1006 SAPDEQSIWNVTVLP-NSKWANITWKHNFGPGTDFVVEYIDSNHTKKTVPVKAQAQPIQL 1064

Query: 100  FDLLGFGRSSRPAFPRDPEGAEDEFVTSIETWRETMGIPSMILLGHSLG----------- 148
             DL      +   + RD EG     +T + +   T     +   G  +G           
Sbjct: 1065 TDLYPGMTYTLRVYSRDNEGISSTVITFMTSTAYTNNQADIATQGWFIGLMCAIALLVLI 1124

Query: 149  ----GFLATSYSIKYPDRVKHLILVDPWGFPLRPTNPSE 183
                 F+  S   KYP R K  +       PL P +P E
Sbjct: 1125 LLIVCFIKRSRGGKYPVREKKDV-------PLGPEDPKE 1156


>gi|28629871 hypothetical protein LOC140701 [Homo sapiens]
          Length = 469

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 20/163 (12%)

Query: 13  LSSWLPTWRPTSMSQLKNVEARILQCLQNKFLARY------VSLPNQNKIWTVTVSPEQN 66
           L  WL    P S+S +      +LQ  Q + + RY      +   + N+I T+ +   Q+
Sbjct: 106 LGRWLVY--PGSVSLMTRALLPLLQQGQERLVERYHGRRAKLVACDGNEIDTMFMDRRQH 163

Query: 67  DRTPLVMVHG------FGGGVGLWILNMDS--LSARRTLHTFDLLGFGRSSRPAFPRDPE 118
              P   VHG        G  G + +   S  L A  ++  ++  GFG S+   FP+   
Sbjct: 164 ---PGSHVHGPRLVICCEGNAGFYEMGCLSAPLEAGYSVLGWNHPGFGSSTGVPFPQHDA 220

Query: 119 GAEDEFVTSIETWRETMGIPSMILLGHSLGGFLATSYSIKYPD 161
            A D  V      R       +++ G S+GGF AT  ++ YP+
Sbjct: 221 NAMD-VVVEYALHRLHFPPAHLVVYGWSVGGFTATWATMTYPE 262


>gi|21536371 telomerase-associated protein 1 [Homo sapiens]
          Length = 2627

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 9/34 (26%), Positives = 22/34 (64%)

Query: 292 WIDTSTGKKVKMQRPDSYVRDMEIKGASHHVYAD 325
           W  +  GK++K+ RP+++ R++ ++G    V+ +
Sbjct: 481 WDSSRAGKRMKLSRPETWERELSLRGNKASVWEE 514


>gi|15100151 HLA-B associated transcript 5 [Homo sapiens]
          Length = 558

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 104 GFGRSSRPAFPRDPEGAEDEFVTSIETWRETMGIPSMILLGHSLGGFLATSYSIKYPD 161
           GF  S+   FP++   A D  V      R       +I+   S+GGF AT  ++ YPD
Sbjct: 314 GFAGSTGVPFPQNEANAMD-VVVQFAIHRLGFQPQDIIIYAWSIGGFTATWAAMSYPD 370


>gi|153218487 KDEL (Lys-Asp-Glu-Leu) containing 2 [Homo sapiens]
          Length = 507

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)

Query: 248 QNPSGETAFKAMMESFGWARRPMLERIH----LIRKDVPITMIYGSDTWIDTSTGKKVKM 303
           ++P+GET FK +++S        L RIH    L R D    M Y     +D   G K+++
Sbjct: 64  RSPAGETPFKVVVKSLS---PKELVRIHVPKPLDRNDGTFLMRYRMYETVD--EGLKIEV 118

Query: 304 QRPDSYVRDME--IKGASHHVYADQP 327
              D +V      +KG  +H Y + P
Sbjct: 119 LYGDEHVAQSPYILKGPVYHEYCECP 144


>gi|18777795 serine hydrolase-like 2 [Homo sapiens]
          Length = 314

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 142 LLGHSLGGFLATSYSIKYPDRVKHLILVD 170
           +LGHS GG +   +   +P+ V  LIL+D
Sbjct: 104 ILGHSFGGVVGGMFFCTFPEMVDKLILLD 132


>gi|169167405 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 141

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 171 PWGFPLRPTNPSEIRAPPAWVKAVASVLGRSNPLAVLRVAGPWGPGLVQRFRPD 224
           P   P+       +  PP      +SV GR++P A LR   P G  L  R RPD
Sbjct: 64  PQAVPVPGAASYRLGLPPTLTSLSSSVPGRASPAARLRNRRP-GCSLATRLRPD 116


>gi|42560223 recombining binding protein suppressor of hairless
           isoform 4 [Homo sapiens]
          Length = 486

 Score = 28.9 bits (63), Expect = 7.0
 Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 13/98 (13%)

Query: 184 IRAPPAWVKAVASV-LGRSNPLAVLRVAGPWGPGLVQRFRPDFKRKFADFFEDDTISEYI 242
           + AP   V  V S+ L     +A+L + G       Q F P+ +  F D       +E +
Sbjct: 333 VLAPVTPVPVVESLQLNGGGDVAMLELTG-------QNFTPNLRVWFGD-----VEAETM 380

Query: 243 YHCNAQNPSGETAFKAMMESFGWARRPMLERIHLIRKD 280
           Y C            A  E + W R+P+   + L+R D
Sbjct: 381 YRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRND 418


>gi|42560225 recombining binding protein suppressor of hairless
           isoform 3 [Homo sapiens]
          Length = 485

 Score = 28.9 bits (63), Expect = 7.0
 Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 13/98 (13%)

Query: 184 IRAPPAWVKAVASV-LGRSNPLAVLRVAGPWGPGLVQRFRPDFKRKFADFFEDDTISEYI 242
           + AP   V  V S+ L     +A+L + G       Q F P+ +  F D       +E +
Sbjct: 332 VLAPVTPVPVVESLQLNGGGDVAMLELTG-------QNFTPNLRVWFGD-----VEAETM 379

Query: 243 YHCNAQNPSGETAFKAMMESFGWARRPMLERIHLIRKD 280
           Y C            A  E + W R+P+   + L+R D
Sbjct: 380 YRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRND 417


>gi|42560229 recombining binding protein suppressor of hairless
           isoform 2 [Homo sapiens]
          Length = 487

 Score = 28.9 bits (63), Expect = 7.0
 Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 13/98 (13%)

Query: 184 IRAPPAWVKAVASV-LGRSNPLAVLRVAGPWGPGLVQRFRPDFKRKFADFFEDDTISEYI 242
           + AP   V  V S+ L     +A+L + G       Q F P+ +  F D       +E +
Sbjct: 334 VLAPVTPVPVVESLQLNGGGDVAMLELTG-------QNFTPNLRVWFGD-----VEAETM 381

Query: 243 YHCNAQNPSGETAFKAMMESFGWARRPMLERIHLIRKD 280
           Y C            A  E + W R+P+   + L+R D
Sbjct: 382 YRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRND 419


>gi|42560227 recombining binding protein suppressor of hairless
           isoform 1 [Homo sapiens]
          Length = 500

 Score = 28.9 bits (63), Expect = 7.0
 Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 13/98 (13%)

Query: 184 IRAPPAWVKAVASV-LGRSNPLAVLRVAGPWGPGLVQRFRPDFKRKFADFFEDDTISEYI 242
           + AP   V  V S+ L     +A+L + G       Q F P+ +  F D       +E +
Sbjct: 347 VLAPVTPVPVVESLQLNGGGDVAMLELTG-------QNFTPNLRVWFGD-----VEAETM 394

Query: 243 YHCNAQNPSGETAFKAMMESFGWARRPMLERIHLIRKD 280
           Y C            A  E + W R+P+   + L+R D
Sbjct: 395 YRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRND 432


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,957,699
Number of Sequences: 37866
Number of extensions: 628389
Number of successful extensions: 1550
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1524
Number of HSP's gapped (non-prelim): 33
length of query: 342
length of database: 18,247,518
effective HSP length: 103
effective length of query: 239
effective length of database: 14,347,320
effective search space: 3429009480
effective search space used: 3429009480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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