Search of human proteins with 50363369

Search of human proteins with 50363369

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|50363369 XK, Kell blood group complex subunit-related,
Y-linked [Homo sapiens]
         (117 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|50363369 XK, Kell blood group complex subunit-related, Y-link...   236   2e-63
gi|51093878 XK, Kell blood group complex subunit-related, Y-link...   236   2e-63
gi|103471991 X Kell blood group precursor-related family, member...   112   5e-26
gi|239747184 PREDICTED: hypothetical protein XP_002343935 [Homo ...   111   1e-25
gi|237874249 XK, Kell blood group complex subunit-related, X-lin...    74   2e-14
gi|10835267 membrane transport protein XK [Homo sapiens]               63   6e-11
gi|65301139 ATPase, class II, type 9A [Homo sapiens]                   28   1.6  
gi|33239443 synaptophysin-like 1 isoform b [Homo sapiens]              27   3.5  
gi|5803185 synaptophysin-like 1 isoform a [Homo sapiens]               27   3.5  
gi|169168282 PREDICTED: hypothetical protein [Homo sapiens]            26   5.9  
gi|62988331 hypothetical protein LOC55780 [Homo sapiens]               26   5.9  
gi|46395479 olfactory receptor, family 10, subfamily A, member 4...    26   7.7  
gi|24431977 XK, Kell blood group complex subunit-related family,...    26   7.7  
gi|42518076 testis expressed sequence 261 [Homo sapiens]               26   7.7  

>gi|50363369 XK, Kell blood group complex subunit-related, Y-linked
           [Homo sapiens]
          Length = 117

 Score =  236 bits (603), Expect = 2e-63
 Identities = 117/117 (100%), Positives = 117/117 (100%)

Query: 1   MFIFNSIADDIFPLISCVGAIHCNILAIRTGNDFAAIKLQVIKLIYLMIWHSLVIISPVV 60
           MFIFNSIADDIFPLISCVGAIHCNILAIRTGNDFAAIKLQVIKLIYLMIWHSLVIISPVV
Sbjct: 1   MFIFNSIADDIFPLISCVGAIHCNILAIRTGNDFAAIKLQVIKLIYLMIWHSLVIISPVV 60

Query: 61  TLAFFPASLKQGSLHFLLIIYFVLLLTPWLEFSKSGTHLPSNTKNNSSMVGKYGCLS 117
           TLAFFPASLKQGSLHFLLIIYFVLLLTPWLEFSKSGTHLPSNTKNNSSMVGKYGCLS
Sbjct: 61  TLAFFPASLKQGSLHFLLIIYFVLLLTPWLEFSKSGTHLPSNTKNNSSMVGKYGCLS 117


>gi|51093878 XK, Kell blood group complex subunit-related, Y-linked
           2 [Homo sapiens]
          Length = 117

 Score =  236 bits (603), Expect = 2e-63
 Identities = 117/117 (100%), Positives = 117/117 (100%)

Query: 1   MFIFNSIADDIFPLISCVGAIHCNILAIRTGNDFAAIKLQVIKLIYLMIWHSLVIISPVV 60
           MFIFNSIADDIFPLISCVGAIHCNILAIRTGNDFAAIKLQVIKLIYLMIWHSLVIISPVV
Sbjct: 1   MFIFNSIADDIFPLISCVGAIHCNILAIRTGNDFAAIKLQVIKLIYLMIWHSLVIISPVV 60

Query: 61  TLAFFPASLKQGSLHFLLIIYFVLLLTPWLEFSKSGTHLPSNTKNNSSMVGKYGCLS 117
           TLAFFPASLKQGSLHFLLIIYFVLLLTPWLEFSKSGTHLPSNTKNNSSMVGKYGCLS
Sbjct: 61  TLAFFPASLKQGSLHFLLIIYFVLLLTPWLEFSKSGTHLPSNTKNNSSMVGKYGCLS 117


>gi|103471991 X Kell blood group precursor-related family, member 3
           [Homo sapiens]
          Length = 459

 Score =  112 bits (281), Expect = 5e-26
 Identities = 62/101 (61%), Positives = 71/101 (70%), Gaps = 1/101 (0%)

Query: 12  FPLISCV-GAIHCNILAIRTGNDFAAIKLQVIKLIYLMIWHSLVIISPVVTLAFFPASLK 70
           F L+S   GAI CNILAI+  ND   IKL  I+   +++W  L +IS VVTLAFF ASLK
Sbjct: 202 FSLLSVTYGAIRCNILAIQISNDDTTIKLPPIEFFCVVMWRFLEVISRVVTLAFFIASLK 261

Query: 71  QGSLHFLLIIYFVLLLTPWLEFSKSGTHLPSNTKNNSSMVG 111
             SL  LLIIYFV LL PWLEF KSG HLP N +NNS+MVG
Sbjct: 262 LKSLPVLLIIYFVSLLAPWLEFWKSGAHLPGNKENNSNMVG 302


>gi|239747184 PREDICTED: hypothetical protein XP_002343935 [Homo
           sapiens]
          Length = 260

 Score =  111 bits (278), Expect = 1e-25
 Identities = 61/101 (60%), Positives = 71/101 (70%), Gaps = 1/101 (0%)

Query: 12  FPLISCV-GAIHCNILAIRTGNDFAAIKLQVIKLIYLMIWHSLVIISPVVTLAFFPASLK 70
           F L+S   GAI CNILAI+  ND   IKL +I+   +++W  L +IS VVTLA F ASLK
Sbjct: 3   FSLLSVTYGAIRCNILAIQISNDDTTIKLPLIEFFCVVMWRFLEVISRVVTLALFIASLK 62

Query: 71  QGSLHFLLIIYFVLLLTPWLEFSKSGTHLPSNTKNNSSMVG 111
             SL  LLIIYFV LL PWLEF KSG HLP N +NNS+MVG
Sbjct: 63  LKSLPVLLIIYFVSLLAPWLEFWKSGAHLPGNKENNSNMVG 103


>gi|237874249 XK, Kell blood group complex subunit-related, X-linked
           [Homo sapiens]
          Length = 449

 Score = 73.9 bits (180), Expect = 2e-14
 Identities = 37/102 (36%), Positives = 64/102 (62%), Gaps = 1/102 (0%)

Query: 11  IFPLISCV-GAIHCNILAIRTGNDFAAIKLQVIKLIYLMIWHSLVIISPVVTLAFFPASL 69
           +F L+S   GA  CN+LAI+   D   I+L  ++++ + IW +L I S ++ L  F A+L
Sbjct: 206 VFSLVSVTYGATLCNMLAIQIKYDDYKIRLGPLEVLCITIWRTLEITSRLLILVLFSATL 265

Query: 70  KQGSLHFLLIIYFVLLLTPWLEFSKSGTHLPSNTKNNSSMVG 111
           K  ++ FL++ + ++L  PW++F +SG  +P+N + N S VG
Sbjct: 266 KLKAVPFLVLNFLIILFEPWIKFWRSGAQMPNNIEKNFSRVG 307


>gi|10835267 membrane transport protein XK [Homo sapiens]
          Length = 444

 Score = 62.8 bits (151), Expect = 6e-11
 Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 1/99 (1%)

Query: 14  LISCV-GAIHCNILAIRTGNDFAAIKLQVIKLIYLMIWHSLVIISPVVTLAFFPASLKQG 72
           L+S V GA+ CNILAI+   D   +K++ +  + + +W S  I + VV L  F + LK  
Sbjct: 177 LLSIVYGALRCNILAIKIKYDEYEVKVKPLAYVCIFLWRSFEIATRVVVLVLFTSVLKTW 236

Query: 73  SLHFLLIIYFVLLLTPWLEFSKSGTHLPSNTKNNSSMVG 111
            +  +LI +F   L PW+ F  SG+  P N +   S VG
Sbjct: 237 VVVIILINFFSFFLYPWILFWCSGSPFPENIEKALSRVG 275


>gi|65301139 ATPase, class II, type 9A [Homo sapiens]
          Length = 1047

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 4/56 (7%)

Query: 34   FAAIKLQVIKLIYLMI--WHSLVIISPVVTLAFFPASLKQGSLHFLLIIYFVLLLT 87
            F ++ L  + ++ L I  WH L+ ++ +++LA + ASL    LH  + +YF+  L+
Sbjct: 958  FTSLILTELLMVALTIQTWHWLMTVAELLSLACYIASLV--FLHEFIDVYFIATLS 1011


>gi|33239443 synaptophysin-like 1 isoform b [Homo sapiens]
          Length = 241

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 4/54 (7%)

Query: 62  LAFFPASLKQGSLHFLLIIYFVLLL----TPWLEFSKSGTHLPSNTKNNSSMVG 111
           L +F +    GSL+  +I  F+ ++      W  + ++  H PSNT    S  G
Sbjct: 181 LCYFGSVTSMGSLNVSVIFGFLNMILWGGNAWFVYKETSLHSPSNTSAPHSQGG 234


>gi|5803185 synaptophysin-like 1 isoform a [Homo sapiens]
          Length = 259

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 4/54 (7%)

Query: 62  LAFFPASLKQGSLHFLLIIYFVLLL----TPWLEFSKSGTHLPSNTKNNSSMVG 111
           L +F +    GSL+  +I  F+ ++      W  + ++  H PSNT    S  G
Sbjct: 199 LCYFGSVTSMGSLNVSVIFGFLNMILWGGNAWFVYKETSLHSPSNTSAPHSQGG 252


>gi|169168282 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 328

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 16/63 (25%), Positives = 26/63 (41%)

Query: 55  IISPVVTLAFFPASLKQGSLHFLLIIYFVLLLTPWLEFSKSGTHLPSNTKNNSSMVGKYG 114
           + SP +T      S    + HFL++I   ++L PW              +  +S  G+  
Sbjct: 27  VCSPELTWKLSGPSAFTPAAHFLVLIPTSIILQPWTSHPSDWRGATEERQLKASDKGRDW 86

Query: 115 CLS 117
           CLS
Sbjct: 87  CLS 89


>gi|62988331 hypothetical protein LOC55780 [Homo sapiens]
          Length = 678

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 10/30 (33%), Positives = 20/30 (66%)

Query: 46  YLMIWHSLVIISPVVTLAFFPASLKQGSLH 75
           YL +W S+ ++SPV++L     +L+  ++H
Sbjct: 574 YLRMWSSIRLLSPVLSLILLLIALELVNIH 603


>gi|46395479 olfactory receptor, family 10, subfamily A, member 4
          [Homo sapiens]
          Length = 315

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 48 MIWHSLVIISPVVTLAFFPASLKQGSLHFLLI--IYFVLLL 86
          M+W +  I+S  V ++F   S +  +L FLL   IY V L+
Sbjct: 1  MMWENWTIVSEFVLVSFSALSTELQALLFLLFLTIYLVTLM 41


>gi|24431977 XK, Kell blood group complex subunit-related family,
           member 8 [Homo sapiens]
          Length = 395

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 45  IYLMIWHSLVIISPVVTLAFFPASLKQG-SLHFLLIIYFVLLLTPWLE 91
           +   +W+ L++   V+ +A F A      +LHFL + + VLLL  WL+
Sbjct: 201 VIYFLWNLLLLWPRVLAVALFSALFPSYVALHFLGL-WLVLLLWVWLQ 247


>gi|42518076 testis expressed sequence 261 [Homo sapiens]
          Length = 196

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 43 KLIYLMIWHSLVIISPVVTLAFFPASLKQGSLHFLLIIYFVLLLT 87
          ++I  MIW S  ++  +     FP S+    L F  ++YF LL T
Sbjct: 43 RIIKYMIWFSTAVLIGLYVFERFPTSMIGVGL-FTNLVYFGLLQT 86


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.330    0.143    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,006,529
Number of Sequences: 37866
Number of extensions: 139521
Number of successful extensions: 312
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 301
Number of HSP's gapped (non-prelim): 17
length of query: 117
length of database: 18,247,518
effective HSP length: 87
effective length of query: 30
effective length of database: 14,953,176
effective search space: 448595280
effective search space used: 448595280
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.