Guide to the Human Genome
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Name: TEX261 Sequence: fasta or formatted (196aa) NCBI GI: 42518076
Description:

testis expressed sequence 261

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         13           2
 C cysteine            1.0          2           1
 D aspartate           1.0          2           2
 E glutamate           4.6          9           2
 F phenylalanine      11.7         23           2
 G glycine             5.6         11           1
 H histidine           0.5          1           1
 I isoleucine          8.2         16           2
 K lysine              3.1          6           1
 L leucine            12.8         25           2
 M methionine          3.1          6           1
 N asparagine          2.6          5           1
 P proline             4.1          8           1
 Q glutamine           2.6          5           1
 R arginine            2.6          5           1
 S serine              7.1         14           1
 T threonine           5.6         11           1
 V valine              8.7         17           3
 W tryptophan          2.0          4           1
 Y tyrosine            6.6         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   testis expressed sequence 261 
OR5K2                 0.027   olfactory receptor, family 5, subfamily K, member 2 ...
OR5K1                 0.016   olfactory receptor, family 5, subfamily K, member 1...
SLC5A9                0.014   solute carrier family 5 (sodium/glucose cotransport...
TAS2R43               0.014   taste receptor, type 2, member 43 
SLC11A2               0.014   solute carrier family 11 (proton-coupled divalent me...
SLC5A9                0.014   solute carrier family 5 (sodium/glucose cotransport...
TAS2R31               0.011   taste receptor, type 2, member 31 
OR4X2                 0.011   olfactory receptor, family 4, subfamily X, member 2 ...
OR4K13                0.011   olfactory receptor, family 4, subfamily K, member 13...
MYLK3                 0.008   myosin light chain kinase 3 
OR4D1                 0.008   olfactory receptor, family 4, subfamily D, member 1 ...
SLC22A16              0.008   solute carrier family 22, member 16 
OR4D2                 0.008   olfactory receptor, family 4, subfamily D, member 2 ...
GPR12                 0.005   G protein-coupled receptor 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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