Search of human proteins with 4885545

Search of human proteins with 4885545

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4885545 pyruvate dehydrogenase kinase 3 isoform 2 [Homo
sapiens]
         (406 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|215422338 pyruvate dehydrogenase kinase 3 isoform 1 [Homo sap...   826   0.0  
gi|4885545 pyruvate dehydrogenase kinase 3 isoform 2 [Homo sapiens]   826   0.0  
gi|4505689 pyruvate dehydrogenase kinase 1 [Homo sapiens]             570   e-163
gi|19923736 pyruvate dehydrogenase kinase 2 [Homo sapiens]            561   e-160
gi|4505693 pyruvate dehydrogenase kinase 4 [Homo sapiens]             521   e-148
gi|171906589 branched chain ketoacid dehydrogenase kinase isofor...   150   2e-36
gi|171906593 branched chain ketoacid dehydrogenase kinase isofor...   115   7e-26
gi|4505209 matrix metalloproteinase 13 preproprotein [Homo sapiens]    32   0.79 
gi|4757756 annexin A2 isoform 2 [Homo sapiens]                         31   2.3  
gi|50845386 annexin A2 isoform 2 [Homo sapiens]                        31   2.3  
gi|50845388 annexin A2 isoform 1 [Homo sapiens]                        31   2.3  
gi|209862831 annexin A2 isoform 2 [Homo sapiens]                       31   2.3  
gi|93277088 mediator of RNA polymerase II transcription, subunit...    30   5.1  
gi|31652242 transcription factor 20 isoform 2 [Homo sapiens]           30   5.1  
gi|31652244 transcription factor 20 isoform 1 [Homo sapiens]           30   5.1  
gi|7662112 hypothetical protein LOC9811 isoform 1 [Homo sapiens]       29   6.7  
gi|38016919 hypothetical protein LOC29035 [Homo sapiens]               29   6.7  

>gi|215422338 pyruvate dehydrogenase kinase 3 isoform 1 [Homo
           sapiens]
          Length = 415

 Score =  826 bits (2133), Expect = 0.0
 Identities = 406/406 (100%), Positives = 406/406 (100%)

Query: 1   MRLFRWLLKQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANT 60
           MRLFRWLLKQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANT
Sbjct: 1   MRLFRWLLKQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANT 60

Query: 61  MREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHN 120
           MREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHN
Sbjct: 61  MREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHN 120

Query: 121 DVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVH 180
           DVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVH
Sbjct: 121 DVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVH 180

Query: 181 PKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSH 240
           PKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSH
Sbjct: 181 PKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSH 240

Query: 241 LFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRL 300
           LFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRL
Sbjct: 241 LFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRL 300

Query: 301 FNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKA 360
           FNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKA
Sbjct: 301 FNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKA 360

Query: 361 LSSESFERLPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKAKQ 406
           LSSESFERLPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKAKQ
Sbjct: 361 LSSESFERLPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKAKQ 406


>gi|4885545 pyruvate dehydrogenase kinase 3 isoform 2 [Homo sapiens]
          Length = 406

 Score =  826 bits (2133), Expect = 0.0
 Identities = 406/406 (100%), Positives = 406/406 (100%)

Query: 1   MRLFRWLLKQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANT 60
           MRLFRWLLKQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANT
Sbjct: 1   MRLFRWLLKQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANT 60

Query: 61  MREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHN 120
           MREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHN
Sbjct: 61  MREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHN 120

Query: 121 DVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVH 180
           DVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVH
Sbjct: 121 DVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVH 180

Query: 181 PKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSH 240
           PKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSH
Sbjct: 181 PKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSH 240

Query: 241 LFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRL 300
           LFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRL
Sbjct: 241 LFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRL 300

Query: 301 FNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKA 360
           FNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKA
Sbjct: 301 FNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKA 360

Query: 361 LSSESFERLPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKAKQ 406
           LSSESFERLPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKAKQ
Sbjct: 361 LSSESFERLPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKAKQ 406


>gi|4505689 pyruvate dehydrogenase kinase 1 [Homo sapiens]
          Length = 436

 Score =  570 bits (1470), Expect = e-163
 Identities = 271/395 (68%), Positives = 333/395 (84%), Gaps = 3/395 (0%)

Query: 12  VPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLPDNL 71
           VP Q++ Y+RFSPSPLS+KQFLDFG  NACEKTS+MFLR+ELPVRLAN M+E++LLPDNL
Sbjct: 42  VPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDNL 101

Query: 72  LNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVI 131
           L  PSV LVQSWY+QS  ELL++++KS ED + + +F   +I++RNRHNDV+PTMAQGVI
Sbjct: 102 LRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVI 161

Query: 132 EYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFG--GDTNPVHPKHIGSIDP 189
           EYKE FG DP  S N+QYFLDRFY +RIS RML+NQH+LLFG  G  +P H KHIGSI+P
Sbjct: 162 EYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKHIGSINP 221

Query: 190 TCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELF 249
            CNV +V+KD YE A+ LC+ YY+ +PELE+EE NAK+P +PIQVVYVPSHL+HM+FELF
Sbjct: 222 NCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELF 281

Query: 250 KNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAP 309
           KN+MRAT+E + +R   YP ++  VTLG EDL++K+SD GGGVPLRKIDRLFNYMYSTAP
Sbjct: 282 KNAMRATMEHHANRGV-YPPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMYSTAP 340

Query: 310 RPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERL 369
           RP +E +RA PLAGFGYGLPISRLYA+YFQGDLKLYS+EG GTDAVIY+KALS++S ERL
Sbjct: 341 RPRVETSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIERL 400

Query: 370 PVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKA 404
           PV+NK+AW+HY T  EADDW  PS EP+D + +++
Sbjct: 401 PVYNKAAWKHYNTNHEADDWCVPSREPKDMTTFRS 435


>gi|19923736 pyruvate dehydrogenase kinase 2 [Homo sapiens]
          Length = 407

 Score =  561 bits (1446), Expect = e-160
 Identities = 267/391 (68%), Positives = 324/391 (82%), Gaps = 2/391 (0%)

Query: 13  PKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLPDNLL 72
           PK IE +S+FSPSPLS+KQFLDFG  NACEKTS+ FLR+ELPVRLAN M+E+NLLPD +L
Sbjct: 17  PKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVRLANIMKEINLLPDRVL 76

Query: 73  NRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVIE 132
           + PSV LVQSWY+QS L+++E+ +K PED + L  F   L+ +RNRHNDVVPTMAQGV+E
Sbjct: 77  STPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVLE 136

Query: 133 YKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKHIGSIDPTCN 192
           YK+ +G DP  + NIQYFLDRFY +RIS RMLINQHTL+F G TNP HPKHIGSIDP CN
Sbjct: 137 YKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGSTNPAHPKHIGSIDPNCN 196

Query: 193 VADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFKNS 252
           V++VVKDAY+ AK+LC++YY+ +P+LE++E NA    +PI +VYVPSHL+HMLFELFKN+
Sbjct: 197 VSEVVKDAYDMAKLLCDKYYMASPDLEIQEINAANSKQPIHMVYVPSHLYHMLFELFKNA 256

Query: 253 MRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAPRPS 312
           MRATVE +E      P +K +V LG+EDLSIK+SD GGGVPLRKI+RLF+YMYSTAP P 
Sbjct: 257 MRATVESHESSLI-LPPIKVMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQ 315

Query: 313 LEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLPVF 372
              T   PLAGFGYGLPISRLYA+YFQGDL+L+SMEG GTDAVIYLKALS++S ERLPV+
Sbjct: 316 -PGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVY 374

Query: 373 NKSAWRHYKTTPEADDWSNPSSEPRDASKYK 403
           NKSAWRHY+T  EA DW  PS+EP++ S Y+
Sbjct: 375 NKSAWRHYQTIQEAGDWCVPSTEPKNTSTYR 405


>gi|4505693 pyruvate dehydrogenase kinase 4 [Homo sapiens]
          Length = 411

 Score =  521 bits (1343), Expect = e-148
 Identities = 247/390 (63%), Positives = 319/390 (81%), Gaps = 2/390 (0%)

Query: 12  VPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLPDNL 71
           VP+++E +SR+SPSPLS+KQ LDFG +NACE+TS+ FLR+ELPVRLAN ++E+++LP  L
Sbjct: 20  VPREVEHFSRYSPSPLSMKQLLDFGSENACERTSFAFLRQELPVRLANILKEIDILPTQL 79

Query: 72  LNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVI 131
           +N  SV LV+SWY+QS ++L+E+  KSP+D + L +F+  LIKVRNRH++VVPTMAQG+I
Sbjct: 80  VNTSSVQLVKSWYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGII 139

Query: 132 EYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKHIGSIDPTC 191
           EYK+    DP  + N+QYFLDRFY NRIS RML+NQH L+F  D+   +P HIGSIDP C
Sbjct: 140 EYKDACTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIF-SDSQTGNPSHIGSIDPNC 198

Query: 192 NVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFKN 251
           +V  VV+DA+E ++MLC+QYYL +PEL++ + N K PD+PI +VYVPSHL HMLFELFKN
Sbjct: 199 DVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFKN 258

Query: 252 SMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAPRP 311
           +MRATVE +++ +     ++ +V LGKEDL+IKISD GGGVPLR IDRLF+Y YSTAP P
Sbjct: 259 AMRATVE-HQENQPSLTPIEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPTP 317

Query: 312 SLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLPV 371
            ++ +R APLAGFGYGLPISRLYA+YFQGDL LYS+ G GTDA+IYLKALSSES E+LPV
Sbjct: 318 VMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSSESIEKLPV 377

Query: 372 FNKSAWRHYKTTPEADDWSNPSSEPRDASK 401
           FNKSA++HY+ + EADDW  PS EP++ +K
Sbjct: 378 FNKSAFKHYQMSSEADDWCIPSREPKNLAK 407


>gi|171906589 branched chain ketoacid dehydrogenase kinase isoform a
           [Homo sapiens]
          Length = 412

 Score =  150 bits (380), Expect = 2e-36
 Identities = 99/338 (29%), Positives = 174/338 (51%), Gaps = 33/338 (9%)

Query: 45  SYMFLRKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQV 104
           S  +L++ELPVR+A+ ++    LP  +   P++  V   Y+++F +L ++     +  + 
Sbjct: 90  SARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEA 149

Query: 105 LDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRML 164
              + Q++ ++ + H DVV  +A+G+ E ++    +  +    +YFLD+  T+R+  RML
Sbjct: 150 --QYCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLV----RYFLDKTLTSRLGIRML 203

Query: 165 INQHTLLFGGDTNPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFN 224
              H  L     +   P  +G I    +   +++   + A+ LCE  Y  AP + +    
Sbjct: 204 ATHHLAL-----HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHV 258

Query: 225 AKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIK 284
           A       +  ++P  L ++L EL KN+MRAT+E + D     P V   +     DL I+
Sbjct: 259 AA------RFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIR 312

Query: 285 ISDLGGGVPLRKIDRLFNYMYSTAPRPSLEP--------------TRAAPLAGFGYGLPI 330
           ISD GGG+  + +DR+ +Y ++TA   + +P               ++ P+ GFG+GLP 
Sbjct: 313 ISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPT 372

Query: 331 SRLYARYFQGDLKLYSMEGVGTDAVIYLKALS--SESF 366
           SR YA Y  G L+L S++G+GTD  + L+ +    ESF
Sbjct: 373 SRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREESF 410


>gi|171906593 branched chain ketoacid dehydrogenase kinase isoform b
           [Homo sapiens]
          Length = 365

 Score =  115 bits (288), Expect = 7e-26
 Identities = 79/279 (28%), Positives = 144/279 (51%), Gaps = 18/279 (6%)

Query: 45  SYMFLRKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQV 104
           S  +L++ELPVR+A+ ++    LP  +   P++  V   Y+++F +L ++     +  + 
Sbjct: 90  SARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEA 149

Query: 105 LDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRML 164
              + Q++ ++ + H DVV  +A+G+ E ++    +  +    +YFLD+  T+R+  RML
Sbjct: 150 --QYCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLV----RYFLDKTLTSRLGIRML 203

Query: 165 INQHTLLFGGDTNPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFN 224
              H  L     +   P  +G I    +   +++   + A+ LCE  Y  AP + +    
Sbjct: 204 ATHHLAL-----HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHV 258

Query: 225 AKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIK 284
           A       +  ++P  L ++L EL KN+MRAT+E + D     P V   +     DL I+
Sbjct: 259 AA------RFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIR 312

Query: 285 ISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAG 323
           ISD GGG+  + +DR+ +Y ++TA   + +P R +PL G
Sbjct: 313 ISDRGGGIAHKDLDRVMDYHFTTAEASTQDP-RISPLFG 350


>gi|4505209 matrix metalloproteinase 13 preproprotein [Homo sapiens]
          Length = 471

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 4/108 (3%)

Query: 175 DTNPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAP-ELEVEEFNAKA--PDKP 231
           D NP HPK     DP+ ++  +     ET       ++ + P +++ E F  K+  P+ P
Sbjct: 272 DPNPKHPKTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQVDAELFLTKSFWPELP 331

Query: 232 IQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKE 279
            ++     H  H L  +F+      +  Y D  EGYP   + + L KE
Sbjct: 332 NRIDAAYEHPSHDLIFIFRGRKFWALNGY-DILEGYPKKISELGLPKE 378


>gi|4757756 annexin A2 isoform 2 [Homo sapiens]
          Length = 339

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 335 ARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLPVFNKSAWRHYKTTPEADDWSNPSS 394
           A+Y   +LK  SM+G+GTD    ++ + S + + L   N+     YKT  E D  S+ S 
Sbjct: 107 AQYDASELKA-SMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSG 165

Query: 395 EPR 397
           + R
Sbjct: 166 DFR 168


>gi|50845386 annexin A2 isoform 2 [Homo sapiens]
          Length = 339

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 335 ARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLPVFNKSAWRHYKTTPEADDWSNPSS 394
           A+Y   +LK  SM+G+GTD    ++ + S + + L   N+     YKT  E D  S+ S 
Sbjct: 107 AQYDASELKA-SMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSG 165

Query: 395 EPR 397
           + R
Sbjct: 166 DFR 168


>gi|50845388 annexin A2 isoform 1 [Homo sapiens]
          Length = 357

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 335 ARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLPVFNKSAWRHYKTTPEADDWSNPSS 394
           A+Y   +LK  SM+G+GTD    ++ + S + + L   N+     YKT  E D  S+ S 
Sbjct: 125 AQYDASELKA-SMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSG 183

Query: 395 EPR 397
           + R
Sbjct: 184 DFR 186


>gi|209862831 annexin A2 isoform 2 [Homo sapiens]
          Length = 339

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 335 ARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLPVFNKSAWRHYKTTPEADDWSNPSS 394
           A+Y   +LK  SM+G+GTD    ++ + S + + L   N+     YKT  E D  S+ S 
Sbjct: 107 AQYDASELKA-SMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSG 165

Query: 395 EPR 397
           + R
Sbjct: 166 DFR 168


>gi|93277088 mediator of RNA polymerase II transcription, subunit 12
           homolog (S. cerevisiae)-like [Homo sapiens]
          Length = 2145

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 16/74 (21%), Positives = 34/74 (45%)

Query: 80  VQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGF 139
           ++ W     L    ++    E  + L   L VL K+R   +D++  +   +++Y ++F  
Sbjct: 227 MKQWEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPMDDDLLKLLLPLMLQYSDEFVQ 286

Query: 140 DPFISTNIQYFLDR 153
             ++S  + YF  R
Sbjct: 287 SAYLSRRLAYFCAR 300


>gi|31652242 transcription factor 20 isoform 2 [Homo sapiens]
          Length = 1938

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 290 GGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGF-GYGL 328
           G VP+   +R+   M   +P PS+ P+  +  AGF G+GL
Sbjct: 401 GSVPMGSRNRILQLMPQLSPTPSMMPSPNSHAAGFKGFGL 440


>gi|31652244 transcription factor 20 isoform 1 [Homo sapiens]
          Length = 1960

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 290 GGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGF-GYGL 328
           G VP+   +R+   M   +P PS+ P+  +  AGF G+GL
Sbjct: 401 GSVPMGSRNRILQLMPQLSPTPSMMPSPNSHAAGFKGFGL 440


>gi|7662112 hypothetical protein LOC9811 isoform 1 [Homo sapiens]
          Length = 598

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 4/67 (5%)

Query: 60  TMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPE--DPQ--VLDNFLQVLIKV 115
           T R+ ++LP+ +  RP + L+QS   +    L E +  + E   PQ   +D  +++L  +
Sbjct: 323 TKRKDSILPERIGERPKITLLQSSKDRLRRRLKEKDEVAVETTTPQQNKMDKLIEILNSM 382

Query: 116 RNRHNDV 122
           RN  +DV
Sbjct: 383 RNNSSDV 389


>gi|38016919 hypothetical protein LOC29035 [Homo sapiens]
          Length = 275

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 10/55 (18%)

Query: 209 EQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDR 263
           EQ   + PEL+ E   A  P+          H    L+ LF+NS  A  +LY+DR
Sbjct: 33  EQDEQLPPELQEEAAAAAQPE----------HKQQKLWHLFQNSATAVAQLYKDR 77


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,752,837
Number of Sequences: 37866
Number of extensions: 710453
Number of successful extensions: 1474
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1451
Number of HSP's gapped (non-prelim): 17
length of query: 406
length of database: 18,247,518
effective HSP length: 105
effective length of query: 301
effective length of database: 14,271,588
effective search space: 4295747988
effective search space used: 4295747988
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.