| Name: DEFB1 | Sequence: fasta or formatted (68aa) | NCBI GI: 4885181 | |
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Description: defensin, beta 1 preproprotein
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Referenced in: Additional Host Defense Functions
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.4 3 1 C cysteine 10.3 7 2 D aspartate 1.5 1 1 E glutamate 1.5 1 1 F phenylalanine 4.4 3 1 G glycine 11.8 8 2 H histidine 2.9 2 1 I isoleucine 2.9 2 1 K lysine 5.9 4 1 L leucine 14.7 10 3 M methionine 2.9 2 1 N asparagine 2.9 2 1 P proline 1.5 1 1 Q glutamine 2.9 2 1 R arginine 4.4 3 1 S serine 10.3 7 2 T threonine 7.4 5 1 V valine 1.5 1 1 W tryptophan 0.0 0 0 Y tyrosine 5.9 4 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 defensin, beta 1 preproprotein LOC100287106 0.073 PREDICTED: hypothetical protein XP_002342470 LOC100289462 0.065 PREDICTED: hypothetical protein XP_002342852 DEFB4 0.065 defensin, beta 4 precursor TNN 0.024 tenascin N FBN2 0.016 fibrillin 2 precursor GFRA1 0.016 GDNF family receptor alpha 1 isoform b preproprotei... GFRA1 0.016 GDNF family receptor alpha 1 isoform b preproprotein... GFRA1 0.016 GDNF family receptor alpha 1 isoform a preproprotein ... LOC100287535 0.016 PREDICTED: hypothetical protein XP_002343194 RNF26 0.016 ring finger protein 26 SLPI 0.008 secretory leukocyte peptidase inhibitor precursor [Ho... LRP2 0.008 low density lipoprotein-related protein 2Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
