BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|4826667 CD8b antigen isoform 5 precursor [Homo sapiens] (210 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|4826667 CD8b antigen isoform 5 precursor [Homo sapiens] 421 e-118 gi|27886631 CD8b antigen isoform 1 precursor [Homo sapiens] 414 e-116 gi|27886639 CD8b antigen isoform 2 precursor [Homo sapiens] 414 e-116 gi|27886635 CD8b antigen isoform 3 precursor [Homo sapiens] 414 e-116 gi|27886637 CD8b antigen isoform 4 precursor [Homo sapiens] 339 9e-94 gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] 42 3e-04 gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens] 42 5e-04 gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ... 42 5e-04 gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] 41 8e-04 gi|90193592 CD79B antigen isoform 3 precursor [Homo sapiens] 39 0.003 gi|11038674 CD79B antigen isoform 1 precursor [Homo sapiens] 39 0.003 gi|169217835 PREDICTED: similar to hCG2038921 [Homo sapiens] 39 0.004 gi|169207803 PREDICTED: similar to hCG2038921 [Homo sapiens] 39 0.004 gi|239750758 PREDICTED: hypothetical protein XP_002347493 [Homo ... 38 0.007 gi|30179915 paired immunoglobulin-like type 2 receptor beta isof... 37 0.012 gi|30179911 paired immunoglobulin-like type 2 receptor beta isof... 37 0.012 gi|51317373 netrin-G1 ligand [Homo sapiens] 37 0.012 gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens] 37 0.016 gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens] 36 0.027 gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo ... 36 0.027 gi|144953878 signal-regulatory protein beta 1 isoform 2 precurso... 36 0.027 gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens] 35 0.035 gi|22902130 PTK7 protein tyrosine kinase 7 isoform d precursor [... 35 0.035 gi|209529703 signal-regulatory protein beta 1 isoform 3 precurso... 35 0.046 gi|157694489 immunoglobulin superfamily, member 2 [Homo sapiens] 35 0.046 gi|144953876 signal-regulatory protein beta 1 isoform 1 precurso... 35 0.060 gi|169207532 PREDICTED: similar to hCG2042717 [Homo sapiens] 35 0.060 gi|239756207 PREDICTED: similar to pre-B lymphocyte gene 2 [Homo... 35 0.060 gi|239750745 PREDICTED: hypothetical protein XP_002347495 [Homo ... 35 0.060 gi|27886642 CD8 antigen alpha polypeptide isoform 2 precursor [H... 34 0.10 >gi|4826667 CD8b antigen isoform 5 precursor [Homo sapiens] Length = 210 Score = 421 bits (1081), Expect = e-118 Identities = 210/210 (100%), Positives = 210/210 (100%) Query: 1 MRPRLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQA 60 MRPRLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQA Sbjct: 1 MRPRLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQA 60 Query: 61 PSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVG 120 PSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVG Sbjct: 61 PSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVG 120 Query: 121 SPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLPRPETQKGPLCSPITLGLLVAGV 180 SPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLPRPETQKGPLCSPITLGLLVAGV Sbjct: 121 SPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLPRPETQKGPLCSPITLGLLVAGV 180 Query: 181 LVLLVSLGVAIHLCCRRRRARLRFMKQFYK 210 LVLLVSLGVAIHLCCRRRRARLRFMKQFYK Sbjct: 181 LVLLVSLGVAIHLCCRRRRARLRFMKQFYK 210 >gi|27886631 CD8b antigen isoform 1 precursor [Homo sapiens] Length = 246 Score = 414 bits (1063), Expect = e-116 Identities = 207/207 (100%), Positives = 207/207 (100%) Query: 1 MRPRLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQA 60 MRPRLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQA Sbjct: 1 MRPRLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQA 60 Query: 61 PSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVG 120 PSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVG Sbjct: 61 PSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVG 120 Query: 121 SPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLPRPETQKGPLCSPITLGLLVAGV 180 SPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLPRPETQKGPLCSPITLGLLVAGV Sbjct: 121 SPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLPRPETQKGPLCSPITLGLLVAGV 180 Query: 181 LVLLVSLGVAIHLCCRRRRARLRFMKQ 207 LVLLVSLGVAIHLCCRRRRARLRFMKQ Sbjct: 181 LVLLVSLGVAIHLCCRRRRARLRFMKQ 207 >gi|27886639 CD8b antigen isoform 2 precursor [Homo sapiens] Length = 243 Score = 414 bits (1063), Expect = e-116 Identities = 207/207 (100%), Positives = 207/207 (100%) Query: 1 MRPRLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQA 60 MRPRLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQA Sbjct: 1 MRPRLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQA 60 Query: 61 PSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVG 120 PSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVG Sbjct: 61 PSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVG 120 Query: 121 SPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLPRPETQKGPLCSPITLGLLVAGV 180 SPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLPRPETQKGPLCSPITLGLLVAGV Sbjct: 121 SPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLPRPETQKGPLCSPITLGLLVAGV 180 Query: 181 LVLLVSLGVAIHLCCRRRRARLRFMKQ 207 LVLLVSLGVAIHLCCRRRRARLRFMKQ Sbjct: 181 LVLLVSLGVAIHLCCRRRRARLRFMKQ 207 >gi|27886635 CD8b antigen isoform 3 precursor [Homo sapiens] Length = 221 Score = 414 bits (1063), Expect = e-116 Identities = 207/207 (100%), Positives = 207/207 (100%) Query: 1 MRPRLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQA 60 MRPRLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQA Sbjct: 1 MRPRLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQA 60 Query: 61 PSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVG 120 PSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVG Sbjct: 61 PSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVG 120 Query: 121 SPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLPRPETQKGPLCSPITLGLLVAGV 180 SPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLPRPETQKGPLCSPITLGLLVAGV Sbjct: 121 SPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLPRPETQKGPLCSPITLGLLVAGV 180 Query: 181 LVLLVSLGVAIHLCCRRRRARLRFMKQ 207 LVLLVSLGVAIHLCCRRRRARLRFMKQ Sbjct: 181 LVLLVSLGVAIHLCCRRRRARLRFMKQ 207 >gi|27886637 CD8b antigen isoform 4 precursor [Homo sapiens] Length = 213 Score = 339 bits (870), Expect = 9e-94 Identities = 177/207 (85%), Positives = 177/207 (85%), Gaps = 30/207 (14%) Query: 1 MRPRLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQA 60 MRPRLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQA Sbjct: 1 MRPRLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQA 60 Query: 61 PSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVG 120 PSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVG Sbjct: 61 PSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVG 120 Query: 121 SPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLPRPETQKGPLCSPITLGLLVAGV 180 SPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLPRPETQKG Sbjct: 121 SPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLPRPETQKG--------------- 165 Query: 181 LVLLVSLGVAIHLCCRRRRARLRFMKQ 207 RRRRARLRFMKQ Sbjct: 166 ---------------RRRRARLRFMKQ 177 >gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] Length = 157 Score = 42.4 bits (98), Expect = 3e-04 Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 13/102 (12%) Query: 17 HGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQR--QAPSSDSHHEFLALWD 74 HG V+ Q+PA + + + LSC A S+S+ + W +Q+ QAP L Sbjct: 24 HGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSWYQQKPGQAP------RLLIYGA 77 Query: 75 SAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFC 116 S + T + + + F L ++S++PED +Y+C Sbjct: 78 STRAT-----GIPARFSGSGSGTDFTLTISSLQPEDFAVYYC 114 >gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens] Length = 152 Score = 41.6 bits (96), Expect = 5e-04 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 19/123 (15%) Query: 4 RLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQ--AP 61 +L LL L G VL Q+PA + + + LSC A S+S+ + W +Q+ AP Sbjct: 6 QLLFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAP 65 Query: 62 S---SDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMI 118 D+ + D G+ G + F L ++ ++PED +Y+C Sbjct: 66 RLLIYDASSRATGIPDRFSGSGSGTD--------------FTLTISRLEPEDFAVYYCQQ 111 Query: 119 VGS 121 GS Sbjct: 112 YGS 114 >gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo sapiens] Length = 152 Score = 41.6 bits (96), Expect = 5e-04 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 19/123 (15%) Query: 4 RLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQ--AP 61 +L LL L G VL Q+PA + + + LSC A S+S+ + W +Q+ AP Sbjct: 6 QLLFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAP 65 Query: 62 S---SDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMI 118 D+ + D G+ G + F L ++ ++PED +Y+C Sbjct: 66 RLLIYDASSRATGIPDRFSGSGSGTD--------------FTLTISRLEPEDFAVYYCQQ 111 Query: 119 VGS 121 GS Sbjct: 112 YGS 114 >gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] Length = 151 Score = 40.8 bits (94), Expect = 8e-04 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 13/115 (11%) Query: 4 RLWLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQR--QAP 61 +L LL L G V+ Q+PA + + + LSC A S+S+ + W +Q+ QAP Sbjct: 6 QLLFLLLLWLPDTTGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSWYQQKPGQAP 65 Query: 62 SSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFC 116 L S + T + + + F L ++S++PED +Y+C Sbjct: 66 ------RLLIYGASTRAT-----GIPARFSGSGSGTDFTLTISSLQPEDFAVYYC 109 >gi|90193592 CD79B antigen isoform 3 precursor [Homo sapiens] Length = 230 Score = 38.9 bits (89), Expect = 0.003 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 21/134 (15%) Query: 20 SVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQAPSSDSHHEFLALWDSAKGT 79 S + Q+P +I + V + C + N+ W ++ D + + L L KG Sbjct: 45 SRIWQSPRFIARKRGFTVKMHCYMNSASGNVSWLWKQEM-----DENPQQLKL---EKGR 96 Query: 80 IHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCM--IVGSPELTFGKGTQLSVVDF 137 + EE + E +A L + ++ ED+GIYFC + E+ G GT+L V+ F Sbjct: 97 M--EESQNESLAT--------LTIQGIRFEDNGIYFCQQKCNNTSEVYQGCGTELRVMGF 146 Query: 138 LPTTAQPTKKSTLK 151 T AQ +++TLK Sbjct: 147 -STLAQLKQRNTLK 159 >gi|11038674 CD79B antigen isoform 1 precursor [Homo sapiens] Length = 229 Score = 38.9 bits (89), Expect = 0.003 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 21/134 (15%) Query: 20 SVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQAPSSDSHHEFLALWDSAKGT 79 S + Q+P +I + V + C + N+ W ++ D + + L L KG Sbjct: 44 SRIWQSPRFIARKRGFTVKMHCYMNSASGNVSWLWKQEM-----DENPQQLKL---EKGR 95 Query: 80 IHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCM--IVGSPELTFGKGTQLSVVDF 137 + EE + E +A L + ++ ED+GIYFC + E+ G GT+L V+ F Sbjct: 96 M--EESQNESLAT--------LTIQGIRFEDNGIYFCQQKCNNTSEVYQGCGTELRVMGF 145 Query: 138 LPTTAQPTKKSTLK 151 T AQ +++TLK Sbjct: 146 -STLAQLKQRNTLK 158 >gi|169217835 PREDICTED: similar to hCG2038921 [Homo sapiens] Length = 120 Score = 38.5 bits (88), Expect = 0.004 Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 10/114 (8%) Query: 7 LLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAK-ISLSNMRIYWLRQRQAPSSDS 65 LLL A T H L Q+ A +K + V +SC+ + ++ ++W++Q AP Sbjct: 8 LLLVAAATGTHAEVQLVQSGAEVK-KPGATVKISCKVSGYTFTDYYMHWVQQ--APGKGL 64 Query: 66 HHEFLALWDSAKG-TIHGEEVEQEKIAVFRDASR--FILNLTSVKPEDSGIYFC 116 E++ L D G TI+ E+ Q ++ + D S + L+S++ ED+ +Y+C Sbjct: 65 --EWMGLVDPEDGETIYAEKF-QGRVTITADTSTDTAYMELSSLRSEDTAVYYC 115 >gi|169207803 PREDICTED: similar to hCG2038921 [Homo sapiens] Length = 120 Score = 38.5 bits (88), Expect = 0.004 Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 10/114 (8%) Query: 7 LLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAK-ISLSNMRIYWLRQRQAPSSDS 65 LLL A T H L Q+ A +K + V +SC+ + ++ ++W++Q AP Sbjct: 8 LLLVAAATGTHAEVQLVQSGAEVK-KPGATVKISCKVSGYTFTDYYMHWVQQ--APGKGL 64 Query: 66 HHEFLALWDSAKG-TIHGEEVEQEKIAVFRDASR--FILNLTSVKPEDSGIYFC 116 E++ L D G TI+ E+ Q ++ + D S + L+S++ ED+ +Y+C Sbjct: 65 --EWMGLVDPEDGETIYAEKF-QGRVTITADTSTDTAYMELSSLRSEDTAVYYC 115 >gi|239750758 PREDICTED: hypothetical protein XP_002347493 [Homo sapiens] Length = 120 Score = 37.7 bits (86), Expect = 0.007 Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 10/114 (8%) Query: 7 LLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAK-ISLSNMRIYWLRQRQAPSSDS 65 L L A T H L Q+ A +K + V +SC+ +L+ + ++W+RQ AP Sbjct: 8 LFLVAAATGTHAQVQLVQSGAEVK-KPGASVKVSCKVSGYTLTELSMHWVRQ--APGKGL 64 Query: 66 HHEFLALWDSAKG-TIHGEEVEQEKIAVFRDASR--FILNLTSVKPEDSGIYFC 116 E++ +D G TI+ ++ Q ++ + D S + L+S++ ED+ +Y+C Sbjct: 65 --EWMGGFDPEDGETIYAQKF-QGRVTMTEDTSTDTAYMELSSLRSEDTAVYYC 115 >gi|30179915 paired immunoglobulin-like type 2 receptor beta isoform a precursor [Homo sapiens] Length = 227 Score = 37.0 bits (84), Expect = 0.012 Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 18/161 (11%) Query: 49 NMRIYWLRQRQAPSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKP 108 N+RI W R H + + + +IH + V + + L +++++ Sbjct: 66 NVRISWRR--------GHFHGQSFYSTRPPSIHKDYVNRLFLNWTEGQESGFLRISNLRK 117 Query: 109 EDSGIYFCMI------VGSPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLP---- 158 ED +YFC + G +L KGT+L++ + TT ST R+ Sbjct: 118 EDQSVYFCRVELDTRRSGRQQLQSIKGTKLTITQAVTTTTTWRPSSTTTIAGLRVTESKG 177 Query: 159 RPETQKGPLCSPITLGLLVAGVLVLLVSLGVAIHLCCRRRR 199 E+ L + I + L VA + +++ L + L RRR+ Sbjct: 178 HSESWHLSLDTAIRVALAVAVLKTVILGLLCLLLLWWRRRK 218 >gi|30179911 paired immunoglobulin-like type 2 receptor beta isoform a precursor [Homo sapiens] Length = 227 Score = 37.0 bits (84), Expect = 0.012 Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 18/161 (11%) Query: 49 NMRIYWLRQRQAPSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKP 108 N+RI W R H + + + +IH + V + + L +++++ Sbjct: 66 NVRISWRR--------GHFHGQSFYSTRPPSIHKDYVNRLFLNWTEGQESGFLRISNLRK 117 Query: 109 EDSGIYFCMI------VGSPELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLP---- 158 ED +YFC + G +L KGT+L++ + TT ST R+ Sbjct: 118 EDQSVYFCRVELDTRRSGRQQLQSIKGTKLTITQAVTTTTTWRPSSTTTIAGLRVTESKG 177 Query: 159 RPETQKGPLCSPITLGLLVAGVLVLLVSLGVAIHLCCRRRR 199 E+ L + I + L VA + +++ L + L RRR+ Sbjct: 178 HSESWHLSLDTAIRVALAVAVLKTVILGLLCLLLLWWRRRK 218 >gi|51317373 netrin-G1 ligand [Homo sapiens] Length = 640 Score = 37.0 bits (84), Expect = 0.012 Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 24/110 (21%) Query: 21 VLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQAPSSDSHHEFLALWDSAKGTI 80 V+ + PA + V L C A SL+++ W + GT+ Sbjct: 355 VIVEPPADLNVTEGMAAELKCRASTSLTSVS---------------------WITPNGTV 393 Query: 81 HGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVGSPELTFGKGT 130 + +IAV D + LN T+V +D+G+Y CM+ S T T Sbjct: 394 MTHGAYKVRIAVLSDGT---LNFTNVTVQDTGMYTCMVSNSVGNTTASAT 440 >gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens] Length = 235 Score = 36.6 bits (83), Expect = 0.016 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 9/99 (9%) Query: 19 NSVLQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQAPSSDSHHEFLALWDSAKG 78 N+ + QTP + ++T + + L C ++ M YW RQ H + +AKG Sbjct: 34 NAGVTQTPKFRVLKTGQSMTLLCAQDMNHEYM--YWYRQDPGMGLRLIHYSVGEGTTAKG 91 Query: 79 TI-HGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFC 116 + G V + K F+L L S P + +YFC Sbjct: 92 EVPDGYNVSRLK------KQNFLLGLESAAPSQTSVYFC 124 >gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens] Length = 651 Score = 35.8 bits (81), Expect = 0.027 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 14/116 (12%) Query: 24 QTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQAPSSDSHHEFLALWDSAKGTIHGE 83 Q A++ V +M L+C L I W R P + TI Sbjct: 519 QPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGA-CPGQKLIYSPKRCHSPRVTTIS-- 575 Query: 84 EVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCM-----IVGSPELTFGKGTQLSV 134 +Q K R+++ + + ++S+ ED+G Y+CM I + E+ G GTQ+SV Sbjct: 576 --DQRK----RNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSV 625 >gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo sapiens] Length = 651 Score = 35.8 bits (81), Expect = 0.027 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 14/116 (12%) Query: 24 QTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQAPSSDSHHEFLALWDSAKGTIHGE 83 Q A++ V +M L+C L I W R P + TI Sbjct: 519 QPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGA-CPGQKLIYSPKRCHSPRVTTIS-- 575 Query: 84 EVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCM-----IVGSPELTFGKGTQLSV 134 +Q K R+++ + + ++S+ ED+G Y+CM I + E+ G GTQ+SV Sbjct: 576 --DQRK----RNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSV 625 >gi|144953878 signal-regulatory protein beta 1 isoform 2 precursor [Homo sapiens] Length = 181 Score = 35.8 bits (81), Expect = 0.027 Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 43/201 (21%) Query: 5 LWLLLAAQLTVLHGNSVLQ--QTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQAPS 62 L LL +LT + G LQ Q + V + L C + I W R A Sbjct: 16 LMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGR 75 Query: 63 SDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIV--G 120 +++ +G H V R+ F ++++++ P D+G Y+C+ G Sbjct: 76 E-------LIYNQKEG--HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKG 126 Query: 121 SP---ELTFGKGTQLSVVDFLPTTAQPTKKSTLKKRVCRLPRPETQKGPLCSPITLGLLV 177 SP E G GT+LSV + PT +P+ + LL+ Sbjct: 127 SPDDVEFKSGAGTELSVRE---AALAPT-----------------------APLLVALLL 160 Query: 178 AGVLVLLVSLGVAIHLCCRRR 198 L+L+V + AI++C +++ Sbjct: 161 GPKLLLVVGVS-AIYICWKQK 180 >gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens] Length = 132 Score = 35.4 bits (80), Expect = 0.035 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 7/95 (7%) Query: 22 LQQTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQAPSSDSHHEFLALWDSAKGTIH 81 + QTP Y+ + T K + L C ++ + ++YW +Q H + + KG + Sbjct: 23 IYQTPRYLVIGTGKKITLECSQ--TMGHDKMYWYQQDPGMELHLIHYSYGVNSTEKGDLS 80 Query: 82 GEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFC 116 E ++ R F L L S +P + Y C Sbjct: 81 SEST----VSRIR-TEHFPLTLESARPSHTSQYLC 110 >gi|22902130 PTK7 protein tyrosine kinase 7 isoform d precursor [Homo sapiens] Length = 1014 Score = 35.4 bits (80), Expect = 0.035 Identities = 36/154 (23%), Positives = 59/154 (38%), Gaps = 25/154 (16%) Query: 77 KGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIVGSPELTFGKGTQLSVVD 136 K TI E + + + + L+ V +D+G Y C+ P+ QL+V Sbjct: 531 KPTIKWERADGSSLPEWVTDNAGTLHFARVTRDDAGNYTCIASNGPQGQIRAHVQLTVAV 590 Query: 137 FLPTTAQPTKKSTLKKRVCRL-----------------PRPETQKGPLCSP-----ITLG 174 F+ +P + + + L P PE +GP P T+G Sbjct: 591 FITFKVEPERTTVYQGHTALLQCEAQGDPKPLIQWKDKPVPEESEGPGSPPPYKMIQTIG 650 Query: 175 LLV-AGVLVLLVSLGVAIHLCCRRRRARLRFMKQ 207 L V A V ++ LG+ + C++R R KQ Sbjct: 651 LSVGAAVAYIIAVLGLMFY--CKKRCKAKRLQKQ 682 >gi|209529703 signal-regulatory protein beta 1 isoform 3 precursor [Homo sapiens] Length = 398 Score = 35.0 bits (79), Expect = 0.046 Identities = 40/154 (25%), Positives = 62/154 (40%), Gaps = 18/154 (11%) Query: 5 LWLLLAAQLTVLHGNSVLQ--QTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQAPS 62 L LL +LT + G LQ Q I V + L C + I W R P Sbjct: 16 LMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRGA-GPG 74 Query: 63 SDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIV--G 120 + +++ +G H V R+ F + ++++ P D+G Y+C+ G Sbjct: 75 RE------LIYNQKEG--HFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYCVKFRKG 126 Query: 121 SP---ELTFGKGTQLSV--VDFLPTTAQPTKKST 149 SP E G GT+LSV P + P ++T Sbjct: 127 SPDHVEFKSGAGTELSVRAKPSAPVVSGPAARAT 160 >gi|157694489 immunoglobulin superfamily, member 2 [Homo sapiens] Length = 1021 Score = 35.0 bits (79), Expect = 0.046 Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 35/171 (20%) Query: 40 SCEAKISLSNMRIYWLRQRQAPSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASR- 98 S + +L ++ YW R+ H + L + +GEE + + +R +S Sbjct: 838 SVGSSATLYSVMWYWNRENSGSKLLVHLQHDGLLE------YGEEGLRRHLHCYRSSSTD 891 Query: 99 FILNLTSVKPEDSGIYFCMIV-----GSPELTFGKG---TQLSVVDFLPTTAQPTKKSTL 150 F+L L V+ ED+G+Y+C + G P + +Q V+ LP+ + TL Sbjct: 892 FVLKLHQVEMEDAGMYWCRVAEWQLHGHPSKWINQASDESQRMVLTVLPS------EPTL 945 Query: 151 KKRVCRLPRPETQKGPLCSPITLGLLVAGVLVLLVSLGVAIHLCCRRRRAR 201 R+C +P+ L + ++LL+ L I L C +AR Sbjct: 946 PSRICS-----------SAPLLYFLFICPFVLLLLLL---ISLLCLYWKAR 982 >gi|144953876 signal-regulatory protein beta 1 isoform 1 precursor [Homo sapiens] Length = 398 Score = 34.7 bits (78), Expect = 0.060 Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 16/137 (11%) Query: 5 LWLLLAAQLTVLHGNSVLQ--QTPAYIKVQTNKMVMLSCEAKISLSNMRIYWLRQRQAPS 62 L LL +LT + G LQ Q + V + L C + I W R A Sbjct: 16 LMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGR 75 Query: 63 SDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASRFILNLTSVKPEDSGIYFCMIV--G 120 +++ +G H V R+ F ++++++ P D+G Y+C+ G Sbjct: 76 E-------LIYNQKEG--HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKG 126 Query: 121 SP---ELTFGKGTQLSV 134 SP E G GT+LSV Sbjct: 127 SPDDVEFKSGAGTELSV 143 >gi|169207532 PREDICTED: similar to hCG2042717 [Homo sapiens] Length = 218 Score = 34.7 bits (78), Expect = 0.060 Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 24/122 (19%) Query: 6 WLLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAK-ISLSNMRIYWLRQRQAP--- 61 W+ L A L + L ++ + VQ + + LSC A + S+ ++W+RQ Sbjct: 52 WVFLVALLRGVQCQVQLVESGGGV-VQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLE 110 Query: 62 -----SSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDASR--FILNLTSVKPEDSGIY 114 S D +++ A DS KG + + RD S+ L + S++ ED+ +Y Sbjct: 111 WVAVISYDGSNKYYA--DSVKG----------RFTISRDNSKNTLYLQMNSLRAEDTAVY 158 Query: 115 FC 116 +C Sbjct: 159 YC 160 >gi|239756207 PREDICTED: similar to pre-B lymphocyte gene 2 [Homo sapiens] Length = 120 Score = 34.7 bits (78), Expect = 0.060 Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 8/113 (7%) Query: 7 LLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAK-ISLSNMRIYWLRQRQAPSSDS 65 L L A T H L Q+ A +K + V +SC+A + ++ I W+RQ ++ Sbjct: 8 LFLVAAATSAHSQVQLVQSGAEVK-KPGASVKVSCKASGYTFTSYDINWVRQ----ATGQ 62 Query: 66 HHEFLALWDSAKGTIHGEEVEQEKIAVFRDAS--RFILNLTSVKPEDSGIYFC 116 E++ + G + Q ++ + R+ S + L+S++ ED+ +Y+C Sbjct: 63 GLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYC 115 >gi|239750745 PREDICTED: hypothetical protein XP_002347495 [Homo sapiens] Length = 120 Score = 34.7 bits (78), Expect = 0.060 Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 8/113 (7%) Query: 7 LLLAAQLTVLHGNSVLQQTPAYIKVQTNKMVMLSCEAK-ISLSNMRIYWLRQRQAPSSDS 65 L L A T H L Q+ A +K + V +SC+A + ++ I W+RQ ++ Sbjct: 8 LFLVAAATSAHSQVQLVQSGAEVK-KPGASVKVSCKASGYTFTSYDINWVRQ----ATGQ 62 Query: 66 HHEFLALWDSAKGTIHGEEVEQEKIAVFRDAS--RFILNLTSVKPEDSGIYFC 116 E++ + G + Q ++ + R+ S + L+S++ ED+ +Y+C Sbjct: 63 GLEWMGWMNPNSGNTGYAQKFQGRVTMTRNTSISTAYMELSSLRSEDTAVYYC 115 >gi|27886642 CD8 antigen alpha polypeptide isoform 2 precursor [Homo sapiens] Length = 198 Score = 33.9 bits (76), Expect = 0.10 Identities = 34/154 (22%), Positives = 57/154 (37%), Gaps = 29/154 (18%) Query: 37 VMLSCEAKISLSNMRIYWLRQRQAPSSDSHHEFLALWDSAKGTIHGEEVEQEKIAVFRDA 96 V L C+ +S WL Q P + L+ S E ++ ++ + R Sbjct: 39 VELKCQVLLSNPTSGCSWLFQ---PRGAAASPTFLLYLSQNKPKAAEGLDTQRFSGKRLG 95 Query: 97 SRFILNLTSVKPEDSGIYFCMIVGSPELTFGKGTQLSVVDFLPTTA----QPTKKSTL-- 150 F+L L+ + E+ G YFC + + + F + + PTT PT T+ Sbjct: 96 DTFVLTLSDFRRENEGYYFCSALSNSIMYFSHFVPV-FLPAKPTTTPAPRPPTPAPTIAS 154 Query: 151 -------------------KKRVCRLPRPETQKG 165 ++RVC+ PRP + G Sbjct: 155 QPLSLRPEACRPAAGGAGNRRRVCKCPRPVVKSG 188 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.324 0.136 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,947,455 Number of Sequences: 37866 Number of extensions: 350136 Number of successful extensions: 1868 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 105 Number of HSP's that attempted gapping in prelim test: 1725 Number of HSP's gapped (non-prelim): 249 length of query: 210 length of database: 18,247,518 effective HSP length: 98 effective length of query: 112 effective length of database: 14,536,650 effective search space: 1628104800 effective search space used: 1628104800 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.