Guide to the Human Genome
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Name: ETF1 Sequence: fasta or formatted (437aa) NCBI GI: 4759034
Description:

eukaryotic translation termination factor 1

Referenced in:

Translation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         24           2
 C cysteine            0.9          4           1
 D aspartate           6.6         29           2
 E glutamate           8.0         35           3
 F phenylalanine       5.5         24           2
 G glycine             8.5         37           2
 H histidine           1.6          7           1
 I isoleucine          6.4         28           2
 K lysine              8.5         37           2
 L leucine             9.8         43           2
 M methionine          2.1          9           1
 N asparagine          4.1         18           2
 P proline             2.3         10           2
 Q glutamine           4.3         19           2
 R arginine            4.1         18           1
 S serine              6.2         27           1
 T threonine           5.0         22           1
 V valine              6.9         30           2
 W tryptophan          0.5          2           1
 Y tyrosine            3.2         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation termination factor 1 
ZBTB20                0.008   zinc finger and BTB domain containing 20 
CTTN                  0.008   cortactin isoform a 
CTTN                  0.008   cortactin isoform b 
NT5DC1                0.008   5'-nucleotidase, cytosolic II-like 1 protein 
OSBPL6                0.007   oxysterol-binding protein-like protein 6 isoform b [...
OSBPL6                0.007   oxysterol-binding protein-like protein 6 isoform a [...
TRIP12                0.007   thyroid hormone receptor interactor 12 
ITPR3                 0.007   inositol 1,4,5-triphosphate receptor, type 3 
SMG1                  0.007   PI-3-kinase-related kinase SMG-1 
TEC                   0.006   tec protein tyrosine kinase 
ZNF280A               0.005   zinc finger protein 280A 
VWA2                  0.005   von Willebrand factor A domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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